etfb (LOC106582677)


Basic Information

Item Value
gene id etfb
gene name LOC106582677
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 35819076 ~ 35823166 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021560989.2
TAGCTACTGTACATTGCTGAACCGAAGAATCGCTAACAATGTCGCGGGTTCTTGTTGGAGTTAAACGTGTAATTGACTATGCTGTCAAGGTAGCTACTTCCCCACTGTCTTCTATTTTAAAACAATTCAACATTTAACGTGCGGAATTTCCATTCGAGACGTCATATGGCtatggtagctagctaacgttaagATCCGCGTAAAGCCCGACCACAGCGGGGTggtgacagatggcgtcaagcactctaTGAACCCCTTCTGTGAGATCGCTGTAGAGGAGGCCGTCAAACTCAAGGAGAAGAAGTTCATCAAAGAGGTGGTGGCCGTCAGCTGTGGGCCCACGCAAGTAACGgagaccATCCGTACTGCACTGGCCATGGGGTGTGACCGCGGCATCCACGTGGAGGTCTCAGGAAAAGACTACGAGGCCATGGGACCCCTGCAGATCGCCAAGATCTTTGCTGCCCTAGCCAAGAAGGAGGAGGCCTCACTCGTCATCCTGGGCAAACAGGCTATTGACGATGACTGTAACCAGACAGGTCAGATGACGGCAGCCTTGTTAGACTGGCCTCagGGCACATTTGCCTCTGAGGTGACCATCGATGGGGAAAAGGTGAAGGTGGTGAGGGAAATCGATGGTGGTCTAGAGACCATAAAAATCAGCATGCCAGCTGTCCTCACAGCAGACCTTCGACTCAACACCCCCAGATACGCCACCCTGCCCAACATCATGAAAGCCAAGAAGAAGAAGATAGCCAACATGAAGCCAGCAGACCTGGGGGTGGACATGGTGTCACGAGTGGAGGTGTTGAGGGTGGACGAGCCCCCAACGAGACTGGCTGGAGTGAAGGTGGAGACGGTGGATGACCTGGTCGCCAAACTCAAGGCTAACGGAACAATCTAGAGGCCCTGTGGGAGCCAAAGGGGGAGTGCAGGGGACACACAGAGGGGTCTCTGTTTGAGAGATGGAACAAAGTAATTTAGCAAACGTGGAGGACTGGTTGCATAAGGCAGAACCCATCGCCACCCGGCCCTCTGTGTTTAACTCTGACTTCCATGATAGTAGCCTACTGACCTGGAATAAAGGGACACTGAGAAACACTGTCCTATAGGAACCCACACAGCCCAGAGGGTGAAgaagaagagggtctgttgttatTGTGCAATTTAATCCACATGGTACATCTGTATTGTAATTAATGTATCTTGCCTGTGAGTATAGGTAACTAGGTATGGAGGACCTAGACTCAAAAAATGCACAACTTCCAAGCCAGTAATATGTCAGTAACTTTCTTTCACCCATGTTTCTGTATGTGTTGCACTGTACATTCAAGAGTGTCACAATAGCATTTTCATCTGTAACATGGGCCTATGAAAACCCTATCACGAAGCCCTACAATGACACATCTGGGCTATGCAGTTTGAGTTGGATGCTATGTGTAAATAAGAACCCAAAGTTGCAGTGCTGAATGTGCATTCAGGGTTTGTGATATGTCTACTGACTTGGTTTGTATAAAgtttatataaatataattatTTCTGAGTTGGGTGGCAGCTCCGGTTGGACAGTGTCTCTCAGATGTGGGAAAATGATTTAAAAAACACACAGTTTACTTTTTACCATAAGCGCCTCTTCTGTTTAGATTGTACAGCATCCTACCATAACAATAAAGGTATCTTTTTCCTATCTACA
>XM_021560982.2
CATTTGTGCTGCTAGAAGATATAGGAGTCTCCTGCTTCTTGGGTGAAGGTTCGTTGTGGTGACTCGGTAACTAGCTACTGTACATTGCTGAACCGAAGAATCGCTAACAATGTCGCGGGTTCTTGTTGGAGTTAAACGTGTAATTGACTATGCTGTCAAGATCCGCGTAAAGCCCGACCACAGCGGGGTggtgacagatggcgtcaagcactctaTGAACCCCTTCTGTGAGATCGCTGTAGAGGAGGCCGTCAAACTCAAGGAGAAGAAGTTCATCAAAGAGGTGGTGGCCGTCAGCTGTGGGCCCACGCAAGTAACGgagaccATCCGTACTGCACTGGCCATGGGGTGTGACCGCGGCATCCACGTGGAGGTCTCAGGAAAAGACTACGAGGCCATGGGACCCCTGCAGATCGCCAAGATCTTTGCTGCCCTAGCCAAGAAGGAGGAGGCCTCACTCGTCATCCTGGGCAAACAGGCTATTGACGATGACTGTAACCAGACAGGTCAGATGACGGCAGCCTTGTTAGACTGGCCTCagGGCACATTTGCCTCTGAGGTGACCATCGATGGGGAAAAGGTGAAGGTGGTGAGGGAAATCGATGGTGGTCTAGAGACCATAAAAATCAGCATGCCAGCTGTCCTCACAGCAGACCTTCGACTCAACACCCCCAGATACGCCACCCTGCCCAACATCATGAAAGCCAAGAAGAAGAAGATAGCCAACATGAAGCCAGCAGACCTGGGGGTGGACATGGTGTCACGAGTGGAGGTGTTGAGGGTGGACGAGCCCCCAACGAGACTGGCTGGAGTGAAGGTGGAGACGGTGGATGACCTGGTCGCCAAACTCAAGGCTAACGGAACAATCTAGAGGCCCTGTGGGAGCCAAAGGGGGAGTGCAGGGGACACACAGAGGGGTCTCTGTTTGAGAGATGGAACAAAGTAATTTAGCAAACGTGGAGGACTGGTTGCATAAGGCAGAACCCATCGCCACCCGGCCCTCTGTGTTTAACTCTGACTTCCATGATAGTAGCCTACTGACCTGGAATAAAGGGACACTGAGAAACACTGTCCTATAGGAACCCACACAGCCCAGAGGGTGAAgaagaagagggtctgttgttatTGTGCAATTTAATCCACATGGTACATCTGTATTGTAATTAATGTATCTTGCCTGTGAGTATAGGTAACTAGGTATGGAGGACCTAGACTCAAAAAATGCACAACTTCCAAGCCAGTAATATGTCAGTAACTTTCTTTCACCCATGTTTCTGTATGTGTTGCACTGTACATTCAAGAGTGTCACAATAGCATTTTCATCTGTAACATGGGCCTATGAAAACCCTATCACGAAGCCCTACAATGACACATCTGGGCTATGCAGTTTGAGTTGGATGCTATGTGTAAATAAGAACCCAAAGTTGCAGTGCTGAATGTGCATTCAGGGTTTGTGATATGTCTACTGACTTGGTTTGTATAAAgtttatataaatataattatTTCTGAGTTGGGTGGCAGCTCCGGTTGGACAGTGTCTCTCAGATGTGGGAAAATGATTTAAAAAACACACAGTTTACTTTTTACCATAAGCGCCTCTTCTGTTTAGATTGTACAGCATCCTACCATAACAATAAAGGTATCTTTTTCCTATCTACA

Function

NR:

description
electron transfer flavoprotein subunit beta-like isoform X1

GO:

id name namespace
GO:0009055 electron transfer activity molecular_function

KEGG:

id description
K03521 fixA, etfB; electron transfer flavoprotein beta subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021560989.2 False 1693 mRNA 0.48 7 35819076 35823095
XM_021560982.2 True 1660 mRNA 0.48 7 35819076 35823166

Neighbor

gene id symbol gene type direction distance location
vsig10l vsig10l coding downstream 1127 35811748 ~ 35817949 (-)
LOC110488647 LOC106605161 coding downstream 19542 35791262 ~ 35799534 (-)
LOC118936742 LOC106605187 coding downstream 80204 35736331 ~ 35738872 (-)
LOC110488613 LOC106605164 coding downstream 92762 35702882 ~ 35726314 (-)
drd2l LOC106582624 coding downstream 118230 35674291 ~ 35700846 (-)
LOC110488718 LOC106605186 coding upstream 250973 36074139 ~ 36080882 (-)
LOC110488725 LOC106605185 coding upstream 258553 36081719 ~ 36088254 (-)
si:dkeyp-97a10.3 LOC106605156 coding upstream 269284 36092450 ~ 36104441 (-)
LOC110534917 NA coding upstream 300116 36123282 ~ 36133319 (-)
LOC110488787 LOC106605151 coding upstream 320721 36143887 ~ 36188948 (-)
G136851 LOC106605162 non-coding downstream 44374 35771628 ~ 35774702 (-)
G136850 LOC106605162 non-coding downstream 44743 35771255 ~ 35774333 (-)
G136751 NA non-coding downstream 62893 35755811 ~ 35756183 (-)
G136749 NA non-coding downstream 64588 35754274 ~ 35754488 (-)
G136744 NA non-coding downstream 67000 35751760 ~ 35752076 (-)
G137165 NA non-coding upstream 277411 36100577 ~ 36100780 (-)
G137166 NA non-coding upstream 278947 36102113 ~ 36102501 (-)
G137168 NA non-coding upstream 283149 36106315 ~ 36106534 (-)
G136399 psmc4 other downstream 511347 35306367 ~ 35307729 (-)
G135575 NA other downstream 1214598 34604215 ~ 34604478 (-)
G134668 NA other downstream 1953139 33865488 ~ 33865937 (-)
LOC110487618 LOC100380645 other downstream 2593974 33208500 ~ 33225125 (-)
G137479 NA other upstream 546838 36370004 ~ 36370328 (-)
G137839 LOC106605146 other upstream 811027 36634193 ~ 36639005 (-)
G138080 NA other upstream 1002700 36825792 ~ 36828397 (-)
pnrc2 LOC106605140 other upstream 1021767 36844929 ~ 36849373 (-)
LOC110501508 LOC106605132 other upstream 1637708 37442359 ~ 37463839 (-)

Expression


Co-expression Network