LOC118936744 (LOC106605183)


Basic Information

Item Value
gene id LOC118936744
gene name LOC106605183
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36275741 ~ 36278586 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036933854.1
TGTGGTTGCGTACATgcatggggttgtgtgtgtgtgttcacattgGCAACTGCTTGATTCCTCTAACTGATCAGATGCTTCACAGGGATGTTACCAGCAACCCGTGTTCCTGACAAGAGACATTGACAATCTAATCAGGATACAACATGAAACAGCACAGGCCTACAACACTATAGACAGGCCTAGAGTGAGTCAGGTCAAAGTTCCGTCGAGGCTGAGTCGTTGTCTAAGAGCTGGAAGTGTACGAATGGGAAAAGGGCATTAGCCAAACTGAGAAGACCTGAAGAGGGGACTTGGTGGAGGGCGGTCTGCCTCACAAAGCTGTGAGGCCTTACTGAGAGTTGTTTCAACAGTTCTAGAGGTCTTTTAGGGTGAACAAGCATGAATCCCATATGGAAAGTGTACAAGAGCAAAGTGCTGAAGACCCTGAACCCGGACCAAGAGGAGTAcacagaggaagagGTCAATAATGCAGAGATTGACATGAGCCCTGTCCAGGAGGATGAGGGGCCCAATGCAGTGTCTCAGCTGGCCAAGagaGTGCAGGGTGCTGGGGCTAAAGGCTGGAACAGAATGTCAGCTCTCTTCAACAAAGAGGATGAGCACCAGCTATTGGAGGAGACTGAGAGCCCGCCTGTCCCAGACCATCCACTAGCAGTGACGCCTGAGGAGCCGCAGAGACCGGCCAGACCCTCCGGATTCTGGGGTAGCTTCGCCACCAACTGGAAACAAATGGCCGCCTCAAAACAGGCTGAAGCCGCAGCAAACGAGACGGGCACGATGGAGGAGGGTCAGGAGGCGGcaggggagggaggtggtgagggagggggggagagtttCCAGGGGGAGAACACGGAGGGCGAGCAGAgtcaagatggaggaggagggagcaaCACCAGCTTCTCCAGATACGCCATGCTTGGAGGAGGGAGCGAGAACACGCCCTTCAAGTGGAACTTTGTCACAGGCAAGCTGGCTGAGTTGAAGACCAAGAGCATGTCTGGCCAGGAAGACTAA

Function

NR:

description
PREDICTED: testis development-related protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036933854.1 True 1017 mRNA 0.54 4 36275741 36278586

Neighbor

gene id symbol gene type direction distance location
LOC101268898 NA coding upstream 42579 36229498 ~ 36233187 (+)
LOC110488805 LOC106605152 coding upstream 47972 36217020 ~ 36227769 (+)
LOC110533753 LOC106605184 coding upstream 153491 36118066 ~ 36123229 (+)
LOC110488747 LOC106605155 coding upstream 162619 36109289 ~ 36113122 (+)
iglon5 iglon5 coding upstream 206329 35928900 ~ 36069412 (+)
LOC110488849 LOC106605147 coding downstream 76297 36354883 ~ 36405310 (+)
LOC110488866 LOC106582899 coding downstream 142165 36420751 ~ 36656060 (+)
LOC110488878 LOC106561205 coding downstream 433498 36712084 ~ 36715233 (+)
LOC110488885 LOC106605145 coding downstream 442562 36721148 ~ 36732138 (+)
LOC110533757 NA coding downstream 466495 36745080 ~ 36747247 (+)
G137280 NA non-coding upstream 4559 36270937 ~ 36271182 (+)
G137275 NA non-coding upstream 8913 36266568 ~ 36266828 (+)
G137274 NA non-coding upstream 9867 36265628 ~ 36265874 (+)
G137266 NA non-coding upstream 18645 36256892 ~ 36257096 (+)
G137265 NA non-coding upstream 20295 36255260 ~ 36255446 (+)
G137298 LOC106605148 non-coding downstream 19534 36298120 ~ 36300071 (+)
G137433 NA non-coding downstream 85486 36364072 ~ 36364287 (+)
G137446 NA non-coding downstream 110941 36389527 ~ 36389806 (+)
G137447 NA non-coding downstream 112537 36391123 ~ 36391888 (+)
G137415 NA non-coding downstream 136152 36414738 ~ 36415241 (+)
G137058 LOC106605156 other upstream 175464 36099611 ~ 36100277 (+)
G136994 NA other upstream 238000 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 419341 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 488271 35785691 ~ 35788114 (+)
LOC110488391 LOC106582385 other upstream 1091745 35180650 ~ 35184002 (+)
G139004 NA other downstream 1498475 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1641149 37919735 ~ 37940714 (+)
G139101 NA other downstream 1665156 37943742 ~ 37944012 (+)
G139179 NA other downstream 1772773 38051359 ~ 38051744 (+)

Expression


Co-expression Network