LOC110488885 (LOC106605145)


Basic Information

Item Value
gene id LOC110488885
gene name LOC106605145
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36721148 ~ 36732138 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561331.2
TGGGAGGGAGTTTGAGCATAGGGAGAGAAAAACAGGAACAAGGTTGATAAGACGGTTCCAAAGTTCACCTGCAGCACACCTGGGGATGGGTGCTCCTCTCCCTAAGCTGGTCAGAGATGGTTCAGGTCATGGATAGGATACCCTATGAAGCCCAGAGCCGCTCACCGATACCCGGAGGATTGGGACTTGGTCTCTCCTTGTGTCTTCATTGATTTTGGACCTGGACCATTCCTATTGTTTTCCCTTTGACTGCAGTCGTATTTACTACACATCACATGGTGGGTTCTCCTTGAGGAAATCAGGACAGTACAGACAGTGGGAACGGGATTTGAATCTCACTCTTCTTACTCCTCAAGCCCAATGGATATGTGGCCTAGGAAGGTCATAGTGCTACTCCTGTACTACTATGGTTGTTCCGCCATTGGTGAAGGGAAGCCATACTTCATCTCTAGGAATTTCAACACTGTGCTCCACTGGAACAAGGTCGACAGCCCAGATGAAGGGGTCCTTTACAGTGTCCATTACCAAAGACACGGAGAGCCATACAAGCCGAAGATTGAGTGCCAGAACATCACCACTCTTTCTTGTGACCTCACTGCAGAGACACCGTACATCTATCAAAATTCCTACTATGCTGAGGTTTTCGCCGACAGTCACTCACTAGGCCGTACAGCACTGTTTAAACCTCTGAGAGACACTATCCTTGGGCCAGCCAATGTGTCTGTGACACCCACAACGTCATCTTTAAAAGTGACTGTCACCCTACCGTTAGGACCGGATAATAAGACTTCCATCGAGGAGATTTTCAATAGTACCAGCTTTTCCTACCATTACCCTCCAACCCTCTATATCCTCAACATCACTCATCCTAGCTGGGCAGCACAGGTCCATAAAAACACAACTGGAGAGTTTGTCCTCAACCATCTAAAAAACAACAGCGTAAAGTACTGTGGCTATGTGGTCTACACCCCGACTAGAGAAATGTACCGAAATGCCAGTGAGAGCAGTACATTCTGTGTGGTATTACCAGGTGAACACTCGCTGCTGTTTCCCTGGTTCCTCCTCTTAGGGTGTCTGCTACTTGGTTCCTTCCTGCTACCGGTGGTGGTGTGTCGTCACTATGTGAGAAAGAAGAGTAACATGCCAGACGCCTTGAAACTGACAACAAGCAACGTCCCTCCTCCATTGTGGCACCCTCCAGAAGCCATCACCTTCTCCATTGCCAAGTCGTATCATTACCCTGTAGGGTTCTCCTACGGTGACCTGAAGACTGGTAAACTCCAGATGGGGCCAAGGTTCACCAGCAGCGGATCTGGGTCCTATTCCCCCCAGGACGAACCCTCCTCCATTGTCCAGCCCAGGCACTGTGACACCTACATGGGCCAGCAGGGTCCACCTCCAGAGCACTCCAACAACAGCACCCAGTCCTCCACCAACTATAGCATGGTCGTAGTGCAGGTGGCTAATGAAGGTGTGGAGGAAGAATGCCATCGCTATCCAGACAGTGAAGACAACATCAACTCTCCATGGTCATCTGAATCCAGTGACCACAAACCCAGTTGTGTTCAAGGTGGCCCAGTTTTGTTTTCGCGTGGAGCACCACCTGAGCCGAAACAGTGTGTTGGAGACAGGAAATCAACAGGGCACCCCCTGGTACTGCCCACATTGCGGCGTATTGATGGCCTACTGCAGTTGTCCACTTTGCTGCTCCAGCCAGAGACACAGAGTGCCATGGCCAGCATGGCACTGCCTACCGACGCTGAGGGGCAGCCCCTTTTGAGGGACCTAGACAGCACTGGGCAAGGGGCATCACTATTGTCTGATCTGGTCACCACGGGGGAGACAGAGTATTTGGACCCTggtacagggagagaggaggagagaacaaTATACACCCCAATCTCTCCAATGTGTTTCAATAACTCCAATGACTCACCATCTCACTCCATACCTCCCATCAACCTTGCAGACTGCGAGACCTCATCAATGACATTCTTGTCTGGTTACAAACAACACTGGGTACCCCTTGCCCCTCTAGGGCTAACAGCAGAGGATAACTTTGGGATTTCCTCATATGCTCCACAACAGGCTTGGATTGATCAGGAGGAAGAAGTGgaaaagggagaggaaggaggagatgaaCGAATCCGTGAATTCTTTCTGGGAGGTTGGGTGGTACAAATTCTTTAGTTCCCCTAAAATAATCTTAAGGGCCTGTTCGCTCTGTGCGGGTCCCCAATGTACGTCAGAGACAAGTTCCGTCTCAGCGAATCTTCACAAAGTGCAAGGAGAAGTtggaaggagcagagagagggtttTGGCAGCGGTGCAGAGTGGGGCTTTCACGGTCCCTCTCCTGCCTGCTATGGAGCTTGTGATTCAGAAACAAGAGCAGGATCCTACTCCAGTATCCAGCACACATGGCCCCCTCAATGGAGTCCTACTGAATCAAAGCTATAATTTTGGCCCTTTTTTAAACATGACGTAGGATCAAGTGTTGTAAAAATGTAGGATCAAGGATATAAGATCAAATGCTGTAAAATAGATTTGTGTACATTATATTGTGACGCTCTATTTCATTTGCATACTGTGCAGCAATAGAACCAGCAATAGAATAGAACCAGCAATAGGCTAGTTCTACCAATATAtgtgtgcacacatacacacatcttaAATGTACACTAACATGTTCATTTAAATCATGACTGTGAAGTTTCTGTTTCATTTGAAGAAATGAAATGGACATCTGTGATTCAAGCTCGGTGGCATAAGGTGGTAAACAGCCAGTCACAGGCACAAAGCTTTTCATTTCATCATACTTGGTCTCTTTATTTattgtttcttgttcttcatatTATCTGTGTTAGTGTTCCATGTTAGATGCACCACAATGCTGAAGAAAATATGACTGACATTTTCACAATTGAAATTCATATTCGCATTGAAGGTGATACATTTCTAAAATATTATTGTCAGAAACACAAAAAAGGGGCAGCATGAGTTAGGTGAGAAATGTGTCAAATGACTTTGTTGAGTGTTTGGTCTTCGAAGTATGTGACCTCAATAACGTCTAGTCATTGTTTGCTGCCCTTTTGAGGTGATGAAATTACAGGACAGGAGACAAAAGGGTTGGTAATTCTTTACCAGGGTGTGGTGGTTATGGTACTCTGGTGAGCTACTAACACCAAATGGCTCGTAGTATCGAAGTGAAACTACCTATGCTATTACTACACTTTGATATATTAATAGGCTGAAACACTGTTAAAACTGGCAGGTATTCCTAGTTGATGCTGTGATGTCTATCACATATTCAacatatatgtacagtataatactgATTTGTTTTTATTTGGCTCACTTTTATAACTAATATGATTGTGAATTTGATGCTTTCATTAAAAGGTAACTATTGTGTTACTGAATTGGTTGATCCCATCATTGCTGTCAAAAGGTACTTCAGCAAACATGTGCTTCAGTACCATTAGTAAGCAGGGGAAGTTGAGGGGAAGTCTTGATGGGCTGACATATCAAGTGTTTCTTCTAAGAATTGCTTGACTTCTAAGAATATTCTTTACTtcaaatttttttttattgattagTGTAGATTAGTGCCAGTGTGAATAACAAGATGTTTCACTGCTGTCTCACTGAAAGGCTCACCAGCAGTGTTATTCCTTGTCATTAGGTATTAGCCAAACATATCAGAATAACCTCCCGCACAGCCATGTCAACCAATGAGGTGGTTTCTGCAAAGAAAGGTCTCAGAAAGGAATACAGTGTGTCCTTCTCCACCCATATACTGTGTATTAGATGACTCAAACAATAAAGTGTCAGCTGGTGGGATATTGATACTGCCAAAGTACAGTGTGGC

Function

NR:

description
uncharacterized protein LOC110488885

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561331.2 True 3871 mRNA 0.45 7 36721148 36732138

Neighbor

gene id symbol gene type direction distance location
LOC110488878 LOC106561205 coding upstream 5915 36712084 ~ 36715233 (+)
LOC110488866 LOC106582899 coding upstream 65088 36420751 ~ 36656060 (+)
LOC110488849 LOC106605147 coding upstream 315838 36354883 ~ 36405310 (+)
LOC118936744 LOC106605183 coding upstream 442562 36275741 ~ 36278586 (+)
LOC101268898 NA coding upstream 487986 36229498 ~ 36233187 (+)
LOC110533757 NA coding downstream 12943 36745080 ~ 36747247 (+)
LOC118939566 NA coding downstream 45880 36778018 ~ 36780665 (+)
LOC110534928 LOC106582914 coding downstream 81632 36813770 ~ 36825082 (+)
LOC110488894 LOC106605182 coding downstream 93597 36825735 ~ 36827081 (+)
LOC110488899 LOC106582930 coding downstream 103043 36835181 ~ 36839924 (+)
G137657 NA non-coding upstream 33119 36687782 ~ 36688029 (+)
G137550 NA non-coding upstream 217178 36493740 ~ 36503970 (+)
G137551 NA non-coding upstream 222203 36495697 ~ 36498945 (+)
G137415 NA non-coding upstream 305907 36414738 ~ 36415241 (+)
G137702 NA non-coding downstream 41012 36773150 ~ 36773510 (+)
G137711 NA non-coding downstream 54219 36786357 ~ 36786558 (+)
G137712 NA non-coding downstream 54588 36786726 ~ 36787107 (+)
G137770 NA non-coding downstream 171777 36903915 ~ 36904132 (+)
G137058 LOC106605156 other upstream 620871 36099611 ~ 36100277 (+)
G136994 NA other upstream 683407 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 864748 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 933678 35785691 ~ 35788114 (+)
G139004 NA other downstream 1044923 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1187597 37919735 ~ 37940714 (+)
G139101 NA other downstream 1211604 37943742 ~ 37944012 (+)
G139179 NA other downstream 1319221 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4807157 41539240 ~ 41541654 (+)

Expression


Co-expression Network