LOC110533757


Basic Information

Item Value
gene id LOC110533757
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36745080 ~ 36747247 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036567.1
TGTGTTTGGCCACATTCTCTTCATGAAGGACGCTTTGTGTCCAGGGCCAGGTTCACCTTCACTGCTCAAAcagggagaggcagagtgagGAGCACGGGAGAgaaagaatagagagaggaactttaaagagaggtgagacagggagaTTAAGAGAACGTGAGACAGcaattgagagagacagatagtgacaggggacaaagagagagagagagagagagagagagagagagagagaaagagagagagagagagaaagagagaaagaaagagagaaagaaagaaagaaagaaagaagtgtGTCCTTCACGCTTTCTTCAAAGACAAACGGGTCCAGGTATCCAGGCACGCACCAGCTGAGACAGAAACATTTTAACACTGGAGATGTACCTTTTTACCACCTTCGTACAAACAACCCTTTCGTTTTGCACAACAATGAGCCGTGAAGGGAAACCAGTGGGGCTGCTATCCGGTTGAAGTGTTAGCCATTAGCCGATTGCTAACATCAGCAGGCTCACCGCAATGTGTTGGTCAGGGGTTCACCATGTCAACCAAGACGCTGATGACACGGGTCCAGGAAGAGCAGTCCCACCAGATGTCCCACAGCATGGCGCCGGCCTCGCAGATCCAGAAGAAAACCTTCACCTCCAGATAAAGGCACCCTGGTACACACCCCCTGCTTCCTCATCATGACATAGATCATGTTTATCCAATGCTTATTATAAAAAACATTGATATAATAAATAAAGAATTTCCAGAAGAGA
>TU158410
TTGTGTTTGGCCACATTCTCTTCATGAAGGACGCTTTGTGTCCAGGGCCAGGTTCACCTTCACTGCTCAAAcagggagaggcagagtgagGAGCACGGGAGAgaaagaatagagagaggaactttaaagagaggtgagacagggagaTTAAGAGAACGTGAGACAGcaattgagagagacagatagtgacaggggacaaagagagagagagagagagagagagagagagagagagaaagagagagagagagagaaagagagaaagaaagagagaaagaaagaaagaaagaaagaagtgtGTCCTTCACGCTTTCTTCAAAGACAAACGTGTTGGTCAGGGGTTCACCATGTCAACCAAGACGCTGATGACACGGGTCCAGGAAGAGCAGTCCCACCAGATGTCCCACAGCATGGCGCCGGCCTCGCAGATCCAGAAGAAAACCTTCACCTCCAGATAAAGGCACCCTGGTACACACCCCCTGCTTCCTCATCATGACATAGATCATGTTTATCCAATGCTTATTATAAAAAACATTGATATAATAAATAAAGAATTTCCAGAAGAG

Function

NR:

description
myomesin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036567.1 False 761 mRNA 0.47 3 36745081 36747247
TU158410 True 566 lncRNA 0.46 2 36745080 36747246

Neighbor

gene id symbol gene type direction distance location
LOC110488885 LOC106605145 coding upstream 12943 36721148 ~ 36732138 (+)
LOC110488878 LOC106561205 coding upstream 29848 36712084 ~ 36715233 (+)
LOC110488866 LOC106582899 coding upstream 89021 36420751 ~ 36656060 (+)
LOC110488849 LOC106605147 coding upstream 339771 36354883 ~ 36405310 (+)
LOC118936744 LOC106605183 coding upstream 466495 36275741 ~ 36278586 (+)
LOC118939566 NA coding downstream 30771 36778018 ~ 36780665 (+)
LOC110534928 LOC106582914 coding downstream 66523 36813770 ~ 36825082 (+)
LOC110488894 LOC106605182 coding downstream 78488 36825735 ~ 36827081 (+)
LOC110488899 LOC106582930 coding downstream 87934 36835181 ~ 36839924 (+)
cnr2 LOC106605139 coding downstream 112461 36859708 ~ 36870284 (+)
G137657 NA non-coding upstream 57052 36687782 ~ 36688029 (+)
G137550 NA non-coding upstream 241111 36493740 ~ 36503970 (+)
G137551 NA non-coding upstream 246136 36495697 ~ 36498945 (+)
G137415 NA non-coding upstream 329840 36414738 ~ 36415241 (+)
G137702 NA non-coding downstream 25903 36773150 ~ 36773510 (+)
G137711 NA non-coding downstream 39110 36786357 ~ 36786558 (+)
G137712 NA non-coding downstream 39479 36786726 ~ 36787107 (+)
G137770 NA non-coding downstream 156668 36903915 ~ 36904132 (+)
G137772 NA non-coding downstream 158218 36905465 ~ 36905799 (+)
G137058 LOC106605156 other upstream 644804 36099611 ~ 36100277 (+)
G136994 NA other upstream 707340 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 888681 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 957611 35785691 ~ 35788114 (+)
G139004 NA other downstream 1029814 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1172488 37919735 ~ 37940714 (+)
G139101 NA other downstream 1196495 37943742 ~ 37944012 (+)
G139179 NA other downstream 1304112 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4792048 41539240 ~ 41541654 (+)

Expression


Co-expression Network