LOC118939566


Basic Information

Item Value
gene id LOC118939566
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36778018 ~ 36780665 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005036570.1
ACAGTCTGAAGAAGAAGTTTGGCCTCAACACGCTGGAAATCAGAAGGTGCTCTGTTGAGGATGCTGGGGAGTACAAGGTGGTTGCCAGGAGTTCTCTGGGTGAAGCTACTACCATTGCCACTCTGGTGGTCAACTCATATCAAGGAGCCGAGGCCACAATCGAGCAATCCTGGACCCCAA

Function

NR:

description
LOW QUALITY PROTEIN: myomesin-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005036570.1 True 180 mRNA 0.52 3 36778018 36780665

Neighbor

gene id symbol gene type direction distance location
LOC110533757 NA coding upstream 30771 36745080 ~ 36747247 (+)
LOC110488885 LOC106605145 coding upstream 45880 36721148 ~ 36732138 (+)
LOC110488878 LOC106561205 coding upstream 62785 36712084 ~ 36715233 (+)
LOC110488866 LOC106582899 coding upstream 121958 36420751 ~ 36656060 (+)
LOC110488849 LOC106605147 coding upstream 372708 36354883 ~ 36405310 (+)
LOC110534928 LOC106582914 coding downstream 33105 36813770 ~ 36825082 (+)
LOC110488894 LOC106605182 coding downstream 45070 36825735 ~ 36827081 (+)
LOC110488899 LOC106582930 coding downstream 54516 36835181 ~ 36839924 (+)
cnr2 LOC106605139 coding downstream 79043 36859708 ~ 36870284 (+)
LOC100499584 LOC100379100 coding downstream 93817 36874482 ~ 36898752 (+)
G137702 NA non-coding upstream 4508 36773150 ~ 36773510 (+)
G137657 NA non-coding upstream 89989 36687782 ~ 36688029 (+)
G137550 NA non-coding upstream 274048 36493740 ~ 36503970 (+)
G137711 NA non-coding downstream 5692 36786357 ~ 36786558 (+)
G137712 NA non-coding downstream 6061 36786726 ~ 36787107 (+)
G137770 NA non-coding downstream 123250 36903915 ~ 36904132 (+)
G137772 NA non-coding downstream 124800 36905465 ~ 36905799 (+)
G137775 NA non-coding downstream 168311 36948976 ~ 36949256 (+)
G137058 LOC106605156 other upstream 677741 36099611 ~ 36100277 (+)
G136994 NA other upstream 740277 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 921618 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 990548 35785691 ~ 35788114 (+)
G139004 NA other downstream 996396 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1139070 37919735 ~ 37940714 (+)
G139101 NA other downstream 1163077 37943742 ~ 37944012 (+)
G139179 NA other downstream 1270694 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4758630 41539240 ~ 41541654 (+)

Expression


Co-expression Network