LOC110488894 (LOC106605182)


Basic Information

Item Value
gene id LOC110488894
gene name LOC106605182
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36825735 ~ 36827081 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561342.2
AGGACATTACTTCAGAGGCTGTGTTACTGATTAGACACAGATGCACAGAGCGGAGCCCCCTCTACCTGCTGATATAAGTAGCTGTGGGGGACGCAGTGCCATCTCTACATTTGTGTTGAGCTTTGCACAGCTGTCTCAGGCTCTTATTGCCCATCTTGGTGAAGGAGAAGAAACCGGACCGGTACAGACACAGACAAAATGGCCTTCAGTGGAACGTGGCAAGTGTATGCGCAGGAGAACTACGAGGAGTTTCTCAGGGCCATCTCCCTCCCAGAAGATGTGATCAAGCTGGCCAAAGACATCAAGCCCATCACTGAGATCCAGCAGAACGGCAATGACTTTGTCATCACCTCCAAAACTCCTGGCAAGTCCGTCACCAACTCCTTCACCATCGGCAAAGAGGCCGACATCACCACCATGGATGGCAAAAAGCTCAAGTGCACTGTCAGACTGGAGGGAGGAAAGCTGATGTGCAACACAGATAAATTCTCCAGCGTCCAGGAGCTCAAGGGAGGAGAGATGGTTGAGACGCTGACAGTGGACTCTACGTCACTCATCAGGAGGAGCAAAAAGTTGTGAACCTGGAATGGTAGCAGGCAGAGGGGCAGTCCTTGGCTATTTAAATAAACTTGCTTGACATAAAA

Function

NR:

description
fatty acid-binding protein 10-A, liver basic-like

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005737 cytoplasm cellular_component
GO:0032052 bile acid binding molecular_function
GO:0005215 transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561342.2 True 644 mRNA 0.50 4 36825735 36827081

Neighbor

gene id symbol gene type direction distance location
LOC110534928 LOC106582914 coding upstream 653 36813770 ~ 36825082 (+)
LOC118939566 NA coding upstream 45070 36778018 ~ 36780665 (+)
LOC110533757 NA coding upstream 78488 36745080 ~ 36747247 (+)
LOC110488885 LOC106605145 coding upstream 93597 36721148 ~ 36732138 (+)
LOC110488878 LOC106561205 coding upstream 110502 36712084 ~ 36715233 (+)
LOC110488899 LOC106582930 coding downstream 8100 36835181 ~ 36839924 (+)
cnr2 LOC106605139 coding downstream 32627 36859708 ~ 36870284 (+)
LOC100499584 LOC100379100 coding downstream 47401 36874482 ~ 36898752 (+)
LOC110488922 LOC106605138 coding downstream 80182 36907263 ~ 36915609 (+)
LOC110488936 LOC106605137 coding downstream 92563 36919644 ~ 36922258 (+)
G137712 NA non-coding upstream 38628 36786726 ~ 36787107 (+)
G137711 NA non-coding upstream 39177 36786357 ~ 36786558 (+)
G137702 NA non-coding upstream 52225 36773150 ~ 36773510 (+)
G137770 NA non-coding downstream 76834 36903915 ~ 36904132 (+)
G137772 NA non-coding downstream 78384 36905465 ~ 36905799 (+)
G137775 NA non-coding downstream 121895 36948976 ~ 36949256 (+)
G137778 NA non-coding downstream 125821 36952902 ~ 36953127 (+)
G137787 NA non-coding downstream 141098 36968179 ~ 36968620 (+)
LOC110488849 LOC106605147 other upstream 423764 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 725458 36099611 ~ 36100277 (+)
G136994 NA other upstream 787994 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 969335 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1038265 35785691 ~ 35788114 (+)
G139004 NA other downstream 949980 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1092654 37919735 ~ 37940714 (+)
G139101 NA other downstream 1116661 37943742 ~ 37944012 (+)
G139179 NA other downstream 1224278 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4712214 41539240 ~ 41541654 (+)

Expression


Co-expression Network