cnr2 (LOC106605139)



Basic Information


Item Value
gene id cnr2
gene name LOC106605139
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36859708 ~ 36870284 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_021561380.2
agattagcgagggaaaaaaacaatttactcaattttagaataaggctgtaacataacaaaatgtggaaaaagtcaaggggtctgaaaactttccgaatgcactgtatatgggggTTAGAATGATGCTGTCTGATTTTTAGTCTGTGACCCATGTGCTATTTTTTTTTATAGCATTTATGAATTGGTACCTCGTTGCATGCTTTAAAGTGACTGTTTATAACATATAGGTCCGTGAAAGTTGTATTGCCTTGTTGCAGTGTCACAACTTAATTGGCACAGTAGGTTTCAACATTTGTGCATACACTTATGCCAATGTCTCTGTGCGCCAGTAGAGGCTGGTgcgaggagctataggaggacgggctggTATGGAATAAATAGAATGGAGTCAAACgtgccattacaatgagcctaaCACGCAGAAAGCGTGAACATGTTAGTACTTCAGGGACTGCAAATGGTCagacatcagtctctctctctccctctctccctctctctctccctccctccctccccgacTGGTTCTGGGGAGTGGAGTTAGATGGAACTCAGTGGCGCTGTAGCTGAGGTCATCAGTTTGGTCTGTCTTCTTCCTACACCACAACAGAACTGACAGAAAAGCATCCACACAAGATCTCAGAGCTAACCCCTGACCtgaaagagatggatggatgggacaAACCTGTAGGGTCCTCTGTAGGGGCCATGATGTCCAAAGACAATGGCAGCACCCCCACATCACCTCTGGTCAACCGGTCCTGTGCGGACCTGAAGTGCTATATGGTTCTGTTTGAGGCGGAGAAGATAGCCATCGGCTCCATCTGTTTCCTGGCCGGACCCTTCACTTTCCTGGAGAATGCTTTGGTCCTGGGTGTGATCGCCGCCACGGCCGCCCTGCGCCAGCGCCCCTCCTACCTCTTCATCGGCAGCCTGGCCCTGGCCGACGTCTTTGCCAGCTGCTTCTTCACCACCAGCTTCCTGGACTTCCACCTGTTCCACCGCCTTGATGGCCCCATCGCCTACCTCTTCAAGCTGGGCGGGGTGACGATGGCTTTCACCGGCTCGGTGGGAAGTCTTCTGCTGACTGCTCTGGACCGCTATCTGTGTATACATCAGGCGTCGAGTTATAAAGTGGTGTTGACGCGCCGCAGGGCCCTGTTGGCTCTCCTTGCCCTGTGGAGCGCCACCATCCTCATCTCCTTCCTCCCTTTGATGGGCTGGAGGTGCCCCACAGGGCTCAGCCCGCCCTGCTCGCGCCTCTTCCCATACGTCGACCACCGCTACCTGGCCTGCTGGGTCAGCTTCATCCTGGTGCTGCTGTCACTCATCCTGAGCGCCTACGTCCTGATCCTGTGGAGGGCCAATCGGCATGAGGCCTCCATGACGGGCCTCCAGGGGGCGCCTACCGGTGGTCAGGCCCGCATGCGGCTGGACATCCGATTGGCACGTACCCTGGGCCTGATTCTGCTCATAATGGTGGGCTGTTGGCTGCCGACCCTCTCCTTCATGCTGGCAGATGTCTCGGTGCAGCTCACACACACCCAGCAGAGGgcttttgctttctgcagcaccATGTGCCTGGTCAACTCAGCCGTCAACCCACTGCTGTATGCCCTGCGCTGCCGGGAGCTGAGGGTGGCACTGATGCGGCTGTTGGGGGGCCTGAGTGAGGGGCTGGGGTGCTGCCAGAGGCACGTAGGGGGAGACTCGACCACTACCCTTCCCTTAGGCGAGGGCAACAGCTGTAGCGCGCACTCCGAGAGTGAGGCGCCCAGACTCGTTAGCTGCCGACCGAACACAGTCTCAGAAATGGTTGGCAAGCAGCAGCTGGACATGACTGGAAAATGAGAAGGGGTGAGAGGCTTACTGTATATCAGGGTTATTGTAGTGGAGTGTTGTGAACTTGTGTTTCTTCTGTTGTGTTCATAGCGATGAGGAGGTAATGTATCTAAAATGAACTGTGATAACAGggactaaaacaaagatatagaccatgttaccatAAATTGTGTTGACCCACCTACAAGCCAAGTCACTACGAGATAATATTATTTTATTAGAAATTAGGGGAATGATCCCAAATTAACACCTTTGGGAAAACAACAGCATTGTTAATGTTGGCAGTGCAAATGTAGATAGCTATGTGTATCCTATGCTTGTTTTAGCTTGAGTGTTTGTCCTTTAGCGTCCAGAAGAGGATCCTGCCGTGTTCCCATCTGCACATATACACCTGTCCTGAACAGAGGCCCTATGGATTGCAAACAATGTTCTCCACATGTGACTGAAAGCAGTGTCGAGATCAGAGGTGTAGGCAAGGCAGAGCCTGAGTGGGTCCACTCAGGAAAAAAAAAGAGGTCCACTCAGATTTTGTGTTATttgaatttttaaaaatgttatgcTCTTTACTTGTCAGTGTTTAAAATGGGATATTATGTCTTTTACCTAAATATGCAAACACTATTAGAATTCATAGCAAGCAGTGCACTGGGTTAGTCAGATTTGATTAAATATAACAAAACAGATGACCTGGAATGACATCACTTGCCAAAAAGAACTAACTGAAAGCCATACCCCCAATGAGCAACGAATATGACTGCATTGAGGCATATGTCACTGTGCTTCCATGACTATATGCACCATGCCACTGCCTATTTCATTTGTTCATTTAGCAAATAAGACAGCTCAAAATCCAGCGCATTTATCACATTCTACACACCTATATTTTAGTTTTAATTTGCTTTAAAAATcctacattttctctcagcctcacggcaaaatgtgtagaatagcatgagatgagCTGAAAAAACGGCACATACACCTCTaaaccctatggcaaaatgtgtaaaattaaATTGGGCGCCCAGACAAATTTCTACAGGCCCAACCAACCACATATTTCTGGCTACGCCACTGGTCGAGATGAGTGGGGCACAGTTTAGAAAGATAGAGAGTCACACAACACAGAGACTAGAACACTCTTTTCTATAGAACATTATAAATATAAACTATAGTTCACAAGTTATTTTAGTAGATCAATCACAAAACAATCAAACACAAAGGTAGATGTTTTGTCTTGTTATCAAAATaacatatttgtcacatgcttcttaaacaacaggtgtagactaacagtgaaatgcttacccacgggtccttttccaacaatgcagagttaaagataaaaatagaaatagcgatatgaggaataaatacacagtgaataatgaataacaataacaagttAAAACTCTAAGCCAAACTGCCCTGCTGCTAAGACAATTTGGTGTTTACTCTGCAGCATTTGAAACAAAGTGTTGTGTGTTTAtactgatcatcctcgcagtggcagaccacgtgtaacaacacctgcacaggatcggtacatctgaacatcactcctgcgggacaggtacaggatggcaacaacaactgcccgagttacac

Function


NR:

description
cannabinoid receptor 2-like

GO:

id name namespace
GO:0038171 cannabinoid signaling pathway biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004949 cannabinoid receptor activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_021561380.2 True 3450 mRNA 0.47 3 36859708 36870284

Neighbor


gene id symbol gene type direction distance location
LOC110488899 LOC106582930 coding upstream 19784 36835181 ~ 36839924 (+)
LOC110488894 LOC106605182 coding upstream 32627 36825735 ~ 36827081 (+)
LOC110534928 LOC106582914 coding upstream 34626 36813770 ~ 36825082 (+)
LOC118939566 NA coding upstream 79043 36778018 ~ 36780665 (+)
LOC110533757 NA coding upstream 112461 36745080 ~ 36747247 (+)
LOC100499584 LOC100379100 coding downstream 4198 36874482 ~ 36898752 (+)
LOC110488922 LOC106605138 coding downstream 36979 36907263 ~ 36915609 (+)
LOC110488936 LOC106605137 coding downstream 49360 36919644 ~ 36922258 (+)
LOC110488952 LOC106605136 coding downstream 56784 36927068 ~ 36946094 (+)
LOC110488961 LOC106605135 coding downstream 404038 37274322 ~ 37278025 (+)
G137712 NA non-coding upstream 72601 36786726 ~ 36787107 (+)
G137711 NA non-coding upstream 73150 36786357 ~ 36786558 (+)
G137702 NA non-coding upstream 86198 36773150 ~ 36773510 (+)
LOC110488878 LOC106561205 non-coding upstream 144667 36712084 ~ 36715233 (+)
G137770 NA non-coding downstream 33631 36903915 ~ 36904132 (+)
G137772 NA non-coding downstream 35181 36905465 ~ 36905799 (+)
G137775 NA non-coding downstream 78692 36948976 ~ 36949256 (+)
G137778 NA non-coding downstream 82618 36952902 ~ 36953127 (+)
G137787 NA non-coding downstream 97895 36968179 ~ 36968620 (+)
LOC110488849 LOC106605147 other upstream 457737 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 759431 36099611 ~ 36100277 (+)
G136994 NA other upstream 821967 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1003308 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1072238 35785691 ~ 35788114 (+)
G139004 NA other downstream 906777 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 1049451 37919735 ~ 37940714 (+)
G139101 NA other downstream 1073458 37943742 ~ 37944012 (+)
G139179 NA other downstream 1181075 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 4669011 41539240 ~ 41541654 (+)

Expression



Co-expression Network