Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC100499584 |
| gene name | LOC100379100 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 36874482 ~ 36898752 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| akirin 1(1b) |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001195162.1 | True | 658 | mRNA | 0.56 | 5 | 36874482 | 36898752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cnr2 | LOC106605139 | coding | upstream | 4198 | 36859708 ~ 36870284 (+) |
| LOC110488899 | LOC106582930 | coding | upstream | 34558 | 36835181 ~ 36839924 (+) |
| LOC110488894 | LOC106605182 | coding | upstream | 47401 | 36825735 ~ 36827081 (+) |
| LOC110534928 | LOC106582914 | coding | upstream | 49400 | 36813770 ~ 36825082 (+) |
| LOC118939566 | NA | coding | upstream | 93817 | 36778018 ~ 36780665 (+) |
| LOC110488922 | LOC106605138 | coding | downstream | 8511 | 36907263 ~ 36915609 (+) |
| LOC110488936 | LOC106605137 | coding | downstream | 20892 | 36919644 ~ 36922258 (+) |
| LOC110488952 | LOC106605136 | coding | downstream | 28316 | 36927068 ~ 36946094 (+) |
| LOC110488961 | LOC106605135 | coding | downstream | 375570 | 37274322 ~ 37278025 (+) |
| LOC110488976 | LOC106605133 | coding | downstream | 448904 | 37347656 ~ 37396662 (+) |
| G137712 | NA | non-coding | upstream | 87375 | 36786726 ~ 36787107 (+) |
| G137711 | NA | non-coding | upstream | 87924 | 36786357 ~ 36786558 (+) |
| G137702 | NA | non-coding | upstream | 100972 | 36773150 ~ 36773510 (+) |
| LOC110533757 | NA | non-coding | upstream | 127236 | 36745080 ~ 36747247 (+) |
| LOC110488878 | LOC106561205 | non-coding | upstream | 159441 | 36712084 ~ 36715233 (+) |
| G137770 | NA | non-coding | downstream | 5163 | 36903915 ~ 36904132 (+) |
| G137772 | NA | non-coding | downstream | 6713 | 36905465 ~ 36905799 (+) |
| G137775 | NA | non-coding | downstream | 50224 | 36948976 ~ 36949256 (+) |
| G137778 | NA | non-coding | downstream | 54150 | 36952902 ~ 36953127 (+) |
| G137787 | NA | non-coding | downstream | 69427 | 36968179 ~ 36968620 (+) |
| LOC110488849 | LOC106605147 | other | upstream | 472511 | 36354883 ~ 36405310 (+) |
| G137058 | LOC106605156 | other | upstream | 774205 | 36099611 ~ 36100277 (+) |
| G136994 | NA | other | upstream | 836741 | 35982832 ~ 36037741 (+) |
| LOC100653444 | LOC106584591 | other | upstream | 1018082 | 35855149 ~ 35865269 (+) |
| LOC110488639 | LOC106605005 | other | upstream | 1087012 | 35785691 ~ 35788114 (+) |
| G139004 | NA | other | downstream | 878309 | 37777061 ~ 37824010 (+) |
| G139089 | LOC106605123 | other | downstream | 1020983 | 37919735 ~ 37940714 (+) |
| G139101 | NA | other | downstream | 1044990 | 37943742 ~ 37944012 (+) |
| G139179 | NA | other | downstream | 1152607 | 38051359 ~ 38051744 (+) |
| LOC110489834 | eny2 | other | downstream | 4640543 | 41539240 ~ 41541654 (+) |
