LOC110488943 (LOC106582967)


Basic Information

Item Value
gene id LOC110488943
gene name LOC106582967
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 36922102 ~ 36925882 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561436.2
TGCGCATGCTCTAAACCCGAGCGTGCTTGTGTTGACGTCAAGGCTAACAGGGAAAACTGTCTGTTGCAGGCAGTGAGAGTCGTAAGAACCTCAGTTAGCAGTAAAGTTTAACGTTAACTTCATAATGGCACACTACAGAGCTTCAGAGTCCAAACGAGAGCAGTTTCAAAGATACCTGGAGAAGGCTGGTGTCCTTGACAGCCTCACCAGTGTGCTGGTGGCATTGTATGAAGAGACGGAGAAACCCAACAATGCGCTTGATTTCCTCAAGCAGCACTTGGGTGTGGCTGGCCAGGAGTCTGCAGACACTGAGGCACTCCAGCAGGACCTAAGAGACATGAGGCAGAGGTGTGAGCTGCTGGCCGAGGAGAACAAAGGACTCAAGAACAGGCTTCAACGCTATGAGCCTACACAAGAGGATGGAGCTGCCGACTAGGATGTGCCTCGGCTTTATTGAAGTAATTTAGTTAGAAACTCAGATTTTTAGGGCGAGTCGAAACCAACAACTGGAGGCAAAGGATTTTATTCACCTctgttcttttttcttttttttttgtatatttgATATATTGAAATATAATAGCTTTTGTCCTTTGACTGTCTCCCCTCATAAAAGCAAACCCCCCTTTTCTGCTTTGTGTACTTAACCTACTGTACACCAATGTTTTGTATCTAGTAAACAAACATTAACGTAA
>TU158947
TCAAGGCTAACAGGGAAAACTGTCTGTTGCAGGCAGTGAGAGTCGTAAGAACCTCAGTTAGCAGTAAAGTTTAACGTTAACTTCATAATGGCACACTACAGAGCTTCAGAGTCCAAACGAGAGCAGTTTCAAAGATACCTGGAGAAGGCTGGTGTCCTTGACAGCCTCACCAGTGTGCTGGTGGCATTGTATGAAGAGACGGAGAAACCCAACAATGCGCTTGACACTTGGGTGTGGCTGGCCAGGAGTCTGCAGACACTGAGGCACTCCAGCAGGACCTAAGAGACATGAGGCAGAGGTGTGAGCTGCTGGCCGAGGAGAACAAAGGACTCAAGAACAGGCTTCAACGCTATGAGCCTACACAAGAGGATGGAGCTGCCGACTAGGATGTGCCTCGGCTTTATTGAAGTAATTTAGTTAGAAACTCAGATTTTTAGGGCGAGTCGAAACCAACAACTGGAGGCAAAGGATTTTATTCACCTctgttcttttttcttttttttttgtatatttgATATATTGAAATATAATAGCTTTTGTCCTTTGACTGTCTCCCCTCATAAAAGCAAACCCCCC

Function

NR:

description
C-Myc-binding protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561436.2 False 695 mRNA 0.45 5 36922102 36925882
TU158947 True 576 lncRNA 0.40 5 36922171 36925845

Neighbor

gene id symbol gene type direction distance location
pnrc2 LOC106605140 coding downstream 72729 36844929 ~ 36849373 (-)
LOC118939565 NA coding downstream 380904 36487954 ~ 36541198 (-)
LOC110488840 LOC106605148 coding downstream 566312 36299063 ~ 36355790 (-)
LOC110488753 LOC106582818 coding downstream 705740 36189587 ~ 36216362 (-)
LOC110488787 LOC106605151 coding downstream 733154 36143887 ~ 36188948 (-)
LOC110533765 NA coding upstream 338294 37264176 ~ 37272975 (-)
LOC110488968 LOC106605134 coding upstream 406765 37332647 ~ 37337607 (-)
LOC110501508 LOC106605132 coding upstream 516477 37442359 ~ 37463839 (-)
LOC118939571 NA coding upstream 538103 37463985 ~ 37476762 (-)
LOC110489008 LOC106604987 coding upstream 851522 37777404 ~ 37782182 (-)
G138167 NA non-coding downstream 3910 36917587 ~ 36918192 (-)
G138146 NA non-coding downstream 23011 36897892 ~ 36899091 (-)
G138100 NA non-coding downstream 40488 36792396 ~ 36881614 (-)
G138145 NA non-coding downstream 47821 36870035 ~ 36874281 (-)
G138080 NA non-coding downstream 93705 36825792 ~ 36828397 (-)
G138153 NA non-coding upstream 17383 36943265 ~ 36946080 (-)
G138181 NA non-coding upstream 39418 36965300 ~ 36965528 (-)
G138188 NA non-coding upstream 47961 36973843 ~ 36974112 (-)
G138199 NA non-coding upstream 76718 37002600 ~ 37003045 (-)
G138243 NA non-coding upstream 142711 37068593 ~ 37068833 (-)
G137839 LOC106605146 other downstream 283097 36634193 ~ 36639005 (-)
G137479 NA other downstream 551774 36370004 ~ 36370328 (-)
drd2l LOC106582624 other downstream 1246397 35674291 ~ 35700846 (-)
G139231 NA other upstream 821559 37747441 ~ 37752958 (-)
LOC110489105 LOC106605178 other upstream 1120820 38046700 ~ 38048666 (-)
G140479 NA other upstream 1902027 38827909 ~ 38828195 (-)
G140879 NA other upstream 2137980 39063862 ~ 39064418 (-)

Expression


Co-expression Network