LOC110533765


Basic Information

Item Value
gene id LOC110533765
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37264176 ~ 37272975 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_002475036.2
CgctgaggggtagagaggggggagatgcgAAGATTGAAAGGGATCTTTGCAAACACAATCACGTTCTTAAATGGAAATGCGGGGCTTTAAACAAATCTTACATCTCTCCCGTTCCAGTCGCCTAAAACTCCGCAATCAGGCGCATGTTCCACTCCTTCTAAAACTGAAGCTTTTTGGAAGCTTTTTCAGGCATCACtctttattttaattatttaccCGAATGCATTTTATCTCACGCGCGTGTTTGTGTTGTCCTCGTCTCTCACATGACACTGCTGTCTGTTTGTAGGCTACAGTGGGACGCGCTGTAATATTTATTCATTTTGATCCCTGGACTAGAGCACGATTTAACGAGTTCCAAACCTTCCATCTAACTCCGTGACAGGCtttaaagcatcaggcttggcaTCCATCCCCTAATCCCCTTCTCAGCTCCTGTCTACCTCTCTGCTGGGGTGTTGGTGCCTGGGCTTCAACCATCAGACCTAACCTGTGTGGCTTCCTGTCCGTCCACAGAGGGACACAATCCTCTACTTTGAATTCAAGGAGCCTGAAGACAACACAGCCTCATGCAGGCTCAGCAACACGCAGGTTACCACCCCAACAGGACACACCATGCCACCCGGCAGGCTGAGTTGTCACGcactacacgtgtgtgtgtgtaagccacaggaggttggtggcaccttaattggggaggacgggctcgtggtaagaGCTGGAGTGGAatcatggtttccatgtgtttgatgccaccccccccccaccaaatgTCCATCCGTCCTGCTTCTCCCCCCCAGCCCACCCATCCTTCCTCTCTACCTATCCACCCTTTCATCCTCTGTCTCTTTTCTTCATACTGGACCGGAATGTGAACGAGTAAAGTTGGCCTCGCAGAGAGAGAGTGCGTCCACTATAACTGATGTCAAATAATAGATAGATTCACTTCTGCAGGTTGAAAGTTGTACTCTATGACAAATGACAtcaattaaagggatagttttcTGTGTTGTTTACTCCAATCAACCTGgaaaactatccctttaaatatTTACATACTGTAGATTTTTTACAAGAGGACACATATGGATTATCTTGAGTACACAACGTAAAATACATGTGTCTATATTAGGAGGATTGTGTCTCTGTTGAAATTGAGAGGACGTCTGTTTTGGGTACCACAAAACATGAATTTGAAAAACCTGTCAGTTTAGAAGAGGTTAGCAACAGGTGAGGAAAACGTTTCGAAAAAACCAAAGCTGTAAAAGTTATGTGACTCACTGAGATATGACCGAACTGTTTTCCGTTTTACTATTGCATCGTTTTTTTTTGTCGGTAACATCAATTGATACTATTCACTAAGGAAGAAAACAAGTTGAATATTATGATAGTGTACACAGCTACTTCGATATCAGGCAGGGATACTTGATATTGCGTACATGAGTGagaccatagaattagaatgaccTGCCGTTATTTTTATTTTGGCTTATTAGTTATTCTCTTTCTATAATCCTGTAATCAGATTGGTCCTCGTGTACCATTATAGAGGGATATTATGTAAGATGGATGTCTTTGCACTATATTCCTTTGAGTGCCATGTCAGTAAATGTTCAGTAGTGGATTTAAAATGTTAAGACAAGACAGATAGGCATACTATCTTGATCACATtttgtttttactttacctttacTCTACCTTTAAACCCATTAAGAAAGTTAAGGCAGACTTCTTACAATACGTAATTCCtagcagctgagagagagagagacagagagacagacagagagagagagagacagagagagagagagatagaccttATTTGATCCAGCAGGCTTTTCACTGGGGCATAGACTGATCAGTCCTGTCCCTCTGGTTACTCTCCTAGTTCTGGCACAATAACAGACAGCTCcagccttacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacattactgcaCACTCACCAGATAACTTAGCTGCAGTCAGAGACCCACTGGAAAGTTATTAATGAGCTGTTTAATTTTAATTAGATAGTAATTCATGTTAATGCTTGCTTAATGGAGCCAAATAATTCCCCTCGGTCACTTGGGGTCTTTATGCTTCGTTTACCGGCCCCCGCAGTTATTCTCCCTTTTGCTTTTATATTAGATTTCAAGTCATTCTAGAGAATGGGATTATACAATGAATATGGGAAACATATGGATCAAtcgaagcgtgtgtgtgtgtgagcacattcatttgtgtaagtgtgtgtgtgcctacttgcgtgttggtgtgtgtgtgtgtgcatattcatttgtgtgtatgtgtgtgcatccaTTTGCGTGTGGGAGCTAGTAGGTGGCTCTCATTTCTAAATGCACCACCCACTACAGTAAATGAATTAAGTCCAGAAAAACAAAAGGTCAAGCTGAGTATTGAGCGCACACTGGGGTCGAAACCTCTCAGGTGGAAGTGCAGCCTGCAGTACATCTCCATACACTGACAAAATAGTACCGGGGTCGCGACCTGAGCATGAGGGTATGTTAAAATGTGCAAACCTCGAGTCGTGTGCTCTGGCTGTTGTAGATGGTGTGTTTTCAACACACCTAGAGGGTTAAAACAATGTTAATATAGGAATGAGGGTAGGAGTGACCAAACAGTTATGCCCTTACCAAACAAGGGGTCATGGCTAAGGCACTGACcagccagcctgtctctctgctgtctggcCTGTGTGCGTGCCGGGTCTGCGCCGGGACCGCATCAAGGCACTAAGCCACCCGGCTGAATTGAGTTAGTGGCTACAGGCGGCTTTTAATTGTTGATTGACCAGTCTGAGTGCTGCCTGTGCCGGGGTCACTTAAGATGGCACAGGGGGAGGTCCCTAGGCCCCAGCTGCAATTTCAGCCCCACAcgacccagagagagggaggagggtgaaaCAAGATGGAGGGACTGACGGAGGgaagaaggaaggaggagaggagagtttagagagagggttagagaggttaTGGACTGTTTCTTTACTTGTTTGTTTGATCAAGAAATTGTTTAATTAAGGGGTTATTACACATATATAATAAACATGGGCTGATGGGTCCCACATAGAAGCACATCAGTTATTGAGGCTCAGGTCCAAGCTCAAGTATGTTGAGCCCAACCCGTACAACAAATCCATATTCTTTGATCCGTTTGACAATTACAAATTTGACTTTGTATTCGTTCCATTTTTCCCAGctcactctacctctccttcattctctccctcttatcctccctctcctctcctcccttcctttaATTTCGGCACAGGGGTACCAAAGCCCACTCTTGCTGTTTAAGCGGGGGTGCGTTCCCTCGCCCCTTTCGCCCCTCTCCCTCACAGCAGGTGCGCGTCCTTCCCTAACATTTGTTATCTCTAATCCTGCAGGTTCCGAGCACAAAAAGAGCGTAGTAAAGTCTCTCACCACCctaatccctccatccctcaactCCTTTTTTGATggcgtttttttgggggggcgggGGGCGGGGGGGTCACTCTGATTACCACACAGTTTTATCTATCTGGGAGCCCCTTGGAAATTCAGAATCGTGGGGGCTTCGTCTGTTTAGCTCCCCGGTCCCGACTTTCCCTTTTTGCCCCCTCTACCCGTAtcatttacagtcattttctgGCAATTAAAAGGGAGCGCTGCTGCGGGTTTTTGGCCCGCAGTGCTATGCTACATCACTGATGAATAATTCTTCAGCCTGCAAACTGGAAAGCTAGCCTTTCTTTCATGTGGGGCTTTGTTGATTTACCATTAAAACTTGCTCTGTGGTGGGCTTTGCCGTGGAGGGCTGCTCTGTGGTTTGGTTTGTGATGGAGGGGGAGACACTAAACATGAAGTGCACACATGCTTCGTGTCAGTTTTCTAAAGTCTAAATTTGGTAGCGTGTTGACTCATTTTATATTTCTGTGCATCTTGAAGGTTTGAATGAATATATACTGGTCATTCTTTTATCAGACACATTGTGCTCAGACTTTATAGTATTAATTCATTTGAAAACACCTTCATTCGTTCATTGATTCATATAGCTATTACTGCTCTATTATCGTGGTTACTTATGGGTGATTTGACATCACACACAGGGCCAGATCTATCCCATagtcacacgcacacaaacacgcatgtatggacacacacactgccccccccccccccccccccccccccccccacacacacacacacagcttccccTTGTCTCCATTGTCTTTATACCCATCATCTCTTACAGGCTGATATACGTAGATCcatacacagagatacacacacaaacaaacataaaacaaacacacaaatctCACCCTCACACCATCATACCAcggacacacatggacacacactgaaGACATAATGGTGATAATGGTGGCCGAAGGCATTCTCagcagggtctctctctctctctctctctgagtagtGCACCGATCagctgatgacacacacacacacacacacacacacgcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_002475036.2 True 4628 mRNA 0.45 3 37264176 37272975

Neighbor

gene id symbol gene type direction distance location
LOC110488943 LOC106582967 coding downstream 338294 36922102 ~ 36925882 (-)
pnrc2 LOC106605140 coding downstream 414803 36844929 ~ 36849373 (-)
LOC118939565 NA coding downstream 722978 36487954 ~ 36541198 (-)
LOC110488840 LOC106605148 coding downstream 908386 36299063 ~ 36355790 (-)
LOC110488753 LOC106582818 coding downstream 1047814 36189587 ~ 36216362 (-)
LOC110488968 LOC106605134 coding upstream 59672 37332647 ~ 37337607 (-)
LOC110501508 LOC106605132 coding upstream 169384 37442359 ~ 37463839 (-)
LOC118939571 NA coding upstream 191010 37463985 ~ 37476762 (-)
LOC110489008 LOC106604987 coding upstream 504429 37777404 ~ 37782182 (-)
LOC118939581 LOC106604987 coding upstream 518264 37791239 ~ 37796388 (-)
G138433 LOC107717746 non-coding downstream 45513 37217954 ~ 37218663 (-)
G138349 NA non-coding downstream 100405 37163543 ~ 37163771 (-)
G138334 NA non-coding downstream 118005 37145920 ~ 37146171 (-)
G138274 NA non-coding downstream 171634 37092332 ~ 37092542 (-)
G138264 NA non-coding downstream 183264 37080655 ~ 37080912 (-)
G138472 LOC106605135 non-coding upstream 1645 37274620 ~ 37278019 (-)
G138484 NA non-coding upstream 13265 37286240 ~ 37286481 (-)
G138646 NA non-coding upstream 33592 37306567 ~ 37306788 (-)
G138651 NA non-coding upstream 42092 37315067 ~ 37315319 (-)
G138659 NA non-coding upstream 58062 37331037 ~ 37331568 (-)
G138080 NA other downstream 435779 36825792 ~ 36828397 (-)
G137839 LOC106605146 other downstream 625171 36634193 ~ 36639005 (-)
G137479 NA other downstream 893848 36370004 ~ 36370328 (-)
drd2l LOC106582624 other downstream 1588471 35674291 ~ 35700846 (-)
G139231 NA other upstream 474466 37747441 ~ 37752958 (-)
LOC110489105 LOC106605178 other upstream 773727 38046700 ~ 38048666 (-)
G140479 NA other upstream 1554934 38827909 ~ 38828195 (-)
G140879 NA other upstream 1790887 39063862 ~ 39064418 (-)

Expression


Co-expression Network