gnl2 (nog2)


Basic Information

Item Value
gene id gnl2
gene name nog2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 37572404 ~ 37603294 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021561508.2
aaaaaaaaaatacacgtACTGTCGCTCTCTGATGACGTCTTTCCGGAATGTGCGGGACGCTGAGTTACAACACGTGGTTCGGGTACATAGAAGAAGTTGAAGATATCACTTTACATTTGGAGTGTTTTCGCTTATTGTTCATCGTCTACCTGTGTGTCAGATAACCTGCCAAAATGGTGAAGCCACGGTTCAAGGGGAAAAGCACGATAAACACCTCGGCGGCCAGCAGTAATCCTGACCGACCCAAGACTCCTGCAGGTTCAGGCAACAGCATGAGGGACCGAGCAACTGTCAGGCGTCTGAATATGTACAGACAAAAGCAGAGATGCAACAACCGAGGCCAGGTGATCAAGCGTTTGTCGTACCAGTCCACTGTTTCTGATGGGACACAGGCCAGAGTGGAGCCCAACATCAAATGGTTTGCAAACACTCGGGTGATCAAGCAGTCGTCTCTACAGAAGTTCCAGGATGAGATGGGTGCAGTGAAGAAGGACCCATACCGCGTGGTGATGAAACAGAGCAGGCTGCCCATGTCACTCCTGCACGACAGAGTCAAGGCACACAACTCTAAGGTACACATCCTGGACACCGAGGGCTTTGAGACCACGTTCGGGCCCAAGGCGCAGCGTAAACGACCCAGCCTGATGGTGGGAGACGTGAAGGACCTGGCAGAACAGGCCGAGGTCTCGGCACAGACCTACAGCGCTGAGAAGGACCGCGACCTGGTCACCGAGGACGACGGGGTCAGAGAGGAAGCTCGTGAGGAGATCTTCAAGAAGGGCCAGTCGAAGAGGATTTGGGGAGAACTCTACAAGGTGATAGACTCGTCAGACGTCATCATACAGGTGCTGGATGCCCGTGACCCCATGGGTACGCGCTCGCAGAGCATCGAGACCTACATGAGGAAGGAGAAGCCTTGGAAGCACCTGATCTTCGTGCTCAACAAGTGCGACCTCATCCCCACCTGGGTCACGAAACGCTGGGTAGCCGTGCTCTCCGCAGAGTACCCCACTCTGGCCTTCCATGCCAGCCTCACCAACTCGTTCGGCAAGGGCTCCCTCATCCAACTCCTCAGGCAGTTTGGCAAGCTCCACACAGACAAGAAACAGATCAGCGTTGGATTCATTGGCTACCCCAACGTGGGAAAGAGCTCTGTCATCAACACTCTACGCTCCAAGAAGGTCTGCAACGTGGCACCCCTCGCCGGTGAGACTAAGGTGTGGCAGTACATCACTCTGATGCGACGCATTTTCCTCATCGACTGCCCCGGTGTCGTTTACCCCTCTGAAGATAGCGAGAGCGACATCGTGTTGAAAGGAGTGGTGCAAGTGGAGAAGATCCGTAACCCGGAGGAGCATATCCCGGCGGTGCTAGAGCGGGCCAAACCAGAGTACATCCAGAAGACGTACCGCATCCCCACCTGGAGCTCCCCAGAAGACTTCCTGGAGAAACTGGCGATGCGCATGGGCAAACTCCTCAAGGGGGGTGAGCCAGACCTTACCTGTGTCTCCAAAATGGTGCTGAACGACTGGCAGAGAGGACGCATCCCCTTCTTCGTAAAACCCCCTGGCTGTGAGGAAGAGCATGAGGGTAAGGATAAACTGCCAGTGGAGGGGGCACCAGAAGCTACAGAGTGTGTACAGGAAGAAGGAGCAACAGAGGAGCAGTGCAAGGAGATGGTGGCTGCAGTGTCGGCCGAGCAGGAGGCCCAGCaacagcagaaacacaaacatgAGCAGGTGCAGAAGATCCTCTCCAATGTCCGGCAGAATTTCGGCAAGATCAACGTGGCGCCCGAGTTCAACGACGAAGACCTGGCACCCGTGCAGACAGACGACCTCGCTTTCTCTGACCTGTCCGGCTCGGACGTGGAGAAGGATAGCGAGGAAGAGGAAAATGGAGATGAAGAgaagggggatggggagacagcaGCCGGTGACGCTGAGGCCGCTGCCACCACCCCAGCCGGTCAGCCTGCCAAGGTGGAGGAAAAAAAGAGTTCTCGTGAGACGATCCGCGAGCTGGACGGGAAGATTGCGAAGTACAAGCAGTTCCTGGACCGGGCCAGACTCAAGCGCTTCTCCGCCATCCGGATTCCGAAGGCACTTTCTGACAAAGTGCTCACAGACATGAAAGAGAAGCAGGCGGGGAATAACCCACAACCTAAAGCCGTAATACAGGTCGGCAAGAAGAGGAAAACCGAGGCGGCAGAAGAGCCCACGCGTCCACACAGAAGTTTAACATCCAAGCAGAGGAGAGCAGCGGATCGTGCTCAGAAGGTGAAGAAAGTTGGAACGCGCTATTACGAAACACACAACGtcaagaacaagaacaagaacagAAAGATGCCTACGGCGCCCAGCGAGGGCAAGAAAGCCAAGAGATCGAAGCGCTAGTCTGGGGTTCGAGACACCAAATTGGGTCATTTctaataaatatttattttaatgaCCCTGTCATTGTAATGACTTGTTTTAAGTTGTCTTGGTACCTACCCTTCTTGATGGAAAGTGATTTGGGTTAGGTTGCATTGAGTGAATTAGATTTTGATGAACCTAATCGCTTGACGCCTTAACCTAATCCTGAGTGACCTTCAACGAAGTGACAACGATCAATGTTGCATCAAACTATTACTTAAACTCATAAGGAGTTTCACTGCGAAGTGAAAGGATGAGTCTGTCATCCAAAAAAAGTACATTTGTACTGCATAGCCTGGATGCCAGTCTGTTTTCATTATTTTGCTAACTCCTCATGGAACTGTCAAATTTGGCATGAcaattccataaggagttggcTAGAGAGCAGAAACACACTGGCACCCAGGTTATGTACAGcacttttggaaaaaaaacagTGACACAATTTTTCTCCAAATATACATGTCATACCATAAAataaagaatatgaacaaatta

Function

symbol description
nog2 Acts upstream of or within negative regulation of BMP signaling pathway. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Is expressed in several structures, including brain; notochord; segmental plate; spinal cord neural tube; and tail bud.

NR:

description
nucleolar GTP-binding protein 2-like

GO:

id name namespace
GO:0005730 nucleolus cellular_component
GO:0005525 GTP binding molecular_function

KEGG:

id description
K14537 NUG2, GNL2; nuclear GTP-binding protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021561508.2 True 2915 mRNA 0.52 16 37572404 37603294

Neighbor

gene id symbol gene type direction distance location
LOC110488976 LOC106605133 coding upstream 175742 37347656 ~ 37396662 (+)
LOC110488961 LOC106605135 coding upstream 294379 37274322 ~ 37278025 (+)
LOC110488952 LOC106605136 coding upstream 626310 36927068 ~ 36946094 (+)
LOC110488936 LOC106605137 coding upstream 650146 36919644 ~ 36922258 (+)
LOC110488922 LOC106605138 coding upstream 656795 36907263 ~ 36915609 (+)
LOC110488991 LOC106605131 coding downstream 3799 37607093 ~ 37621875 (+)
LOC110489000 LOC106605130 coding downstream 24858 37628152 ~ 37664293 (+)
LOC110501519 LOC106605129 coding downstream 95921 37699215 ~ 37763715 (+)
LOC110489035 LOC106605126 coding downstream 259907 37863201 ~ 37890510 (+)
sh3d21 LOC106605124 coding downstream 288657 37891951 ~ 37911330 (+)
G138640 NA non-coding upstream 40291 37531419 ~ 37532113 (+)
G138631 NA non-coding upstream 53550 37518494 ~ 37518854 (+)
G138630 NA non-coding upstream 59659 37512539 ~ 37512745 (+)
G138622 NA non-coding upstream 73445 37498618 ~ 37498959 (+)
G138621 NA non-coding upstream 74764 37497408 ~ 37497640 (+)
G138991 NA non-coding downstream 89688 37692982 ~ 37693181 (+)
G139038 LOC106586992 non-coding downstream 169696 37772990 ~ 37773504 (+)
G139040 NA non-coding downstream 173297 37776591 ~ 37776949 (+)
G139102 NA non-coding downstream 341608 37944902 ~ 37945164 (+)
G139103 NA non-coding downstream 342050 37945344 ~ 37945605 (+)
LOC110488849 LOC106605147 other upstream 1170433 36354883 ~ 36405310 (+)
G137058 LOC106605156 other upstream 1472127 36099611 ~ 36100277 (+)
G136994 NA other upstream 1534663 35982832 ~ 36037741 (+)
LOC100653444 LOC106584591 other upstream 1716004 35855149 ~ 35865269 (+)
LOC110488639 LOC106605005 other upstream 1784934 35785691 ~ 35788114 (+)
G139004 NA other downstream 173767 37777061 ~ 37824010 (+)
G139089 LOC106605123 other downstream 316441 37919735 ~ 37940714 (+)
G139101 NA other downstream 340448 37943742 ~ 37944012 (+)
G139179 NA other downstream 448065 38051359 ~ 38051744 (+)
LOC110489834 eny2 other downstream 3936001 41539240 ~ 41541654 (+)

Expression


Co-expression Network