Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110489186 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38852233 ~ 38854258 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| hypothetical protein EH28_21382 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_002468535.2 | True | 358 | mRNA | 0.41 | 4 | 38852233 | 38854258 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489143 | LOC106605116 | coding | downstream | 101004 | 38738678 ~ 38779271 (-) |
| LOC110489131 | LOC106605119 | coding | downstream | 357892 | 38379192 ~ 38494341 (-) |
| LOC110489123 | LOC106605177 | coding | downstream | 764835 | 38086165 ~ 38087398 (-) |
| LOC110489095 | LOC106605120 | coding | downstream | 798869 | 38048897 ~ 38053364 (-) |
| LOC110489105 | LOC106605178 | coding | downstream | 803827 | 38046700 ~ 38048666 (-) |
| LOC110489192 | LOC106605112 | coding | upstream | 4248 | 38858506 ~ 38892046 (-) |
| LOC110489249 | LOC106605107 | coding | upstream | 98566 | 38952824 ~ 38963780 (-) |
| LOC110489261 | LOC106605105 | coding | upstream | 121347 | 38975605 ~ 38983972 (-) |
| LOC110489287 | LOC106605101 | coding | upstream | 343408 | 39197666 ~ 39209506 (-) |
| LOC118939935 | LOC106605099 | coding | upstream | 364293 | 39218551 ~ 39220640 (-) |
| G140456 | NA | non-coding | downstream | 4499 | 38847225 ~ 38847734 (-) |
| G140493 | NA | non-coding | downstream | 7352 | 38844660 ~ 38844881 (-) |
| G140491 | NA | non-coding | downstream | 8595 | 38843423 ~ 38843638 (-) |
| G140490 | LOC106605114 | non-coding | downstream | 10021 | 38841682 ~ 38842212 (-) |
| G140486 | NA | non-coding | downstream | 14564 | 38837443 ~ 38837669 (-) |
| G140496 | NA | non-coding | upstream | 1630 | 38855888 ~ 38856108 (-) |
| G140498 | NA | non-coding | upstream | 2445 | 38856703 ~ 38857020 (-) |
| G140511 | NA | non-coding | upstream | 21202 | 38875460 ~ 38918576 (-) |
| G140560 | mecr | non-coding | upstream | 79592 | 38933850 ~ 38934228 (-) |
| G140506 | ppp1r8 | non-coding | upstream | 116371 | 38970629 ~ 38989073 (-) |
| G140479 | NA | other | downstream | 24038 | 38827909 ~ 38828195 (-) |
| G139231 | NA | other | downstream | 1099275 | 37747441 ~ 37752958 (-) |
| LOC110501508 | LOC106605132 | other | downstream | 1388475 | 37442359 ~ 37463839 (-) |
| pnrc2 | LOC106605140 | other | downstream | 2002888 | 36844929 ~ 36849373 (-) |
| G140879 | NA | other | upstream | 209604 | 39063862 ~ 39064418 (-) |
| G141363 | LOC106605077 | other | upstream | 909675 | 39763933 ~ 39765473 (-) |
| LOC110489653 | LOC106605072 | other | upstream | 1370364 | 40224622 ~ 40298333 (-) |
| G142918 | NA | other | upstream | 2008956 | 40863214 ~ 40863721 (-) |
| LOC110489860 | LOC106605053 | other | upstream | 2860288 | 41714269 ~ 41730507 (-) |
