LOC110533769 (LOC106583263)


Basic Information

Item Value
gene id LOC110533769
gene name LOC106583263
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38855182 ~ 38857226 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036947870.1
CGATCATACATCAATCAATGTAAGCTGTTTGCATAAGACCATTCATTCCTAATGGTTTGCTTTTGAAGTGTAGATGGTGCAGAAGTCACGAATTCAACAGTGAAGGCTCTAAAGGATGGGAGAGTTGTGGCTGTGCCAACGGACACAATATATGGGCTGGCTTGCTTGGCTCAGAATTCCAATGCCATCAAAAAGGTGTATGACATCAAATGACGTAATGGTGAGAAACCACTGGCCATTTGTGTTGGAGAAATCAAAGACATTTTACAAGTACTGTAAGGTGTCAGTCAAGAAAGAACTGATAGGGGACCTGTTGCCTGGCCCTGTCACTCTGGTTCTGGAACGAGCTGAAGTACTCAACACTGACCTCAATCCCTTCACTCCGTTAGTAGTAGTGTGCATCCCGGACCAGGCCTTTATGAGACGCCTCTGCCAGATGTGTCGGGAACCTCTTGCAGTCACCAGCGCCAACATCAGCTCACACTCCAGCACTGTGGCTGTACATGACTTCCAGGATCTGTGGCCTCAGTTATCAGTGGTGGTGGATGGCGGACCAATAGGAGACAAGAGTCGGTTGGGGTCAACAGGCAAATACCGCATCATCAGACCTGGCTGtgcctTCTCTTCCACAGTTCATGTGCTAGAGCACAAATATGGACTGTCAGAAGACACGGGATGAGTGAGGTTTGCCCCCTTCAAATTCATACCACATGCTGAAATGTACAACCAGCAAGAACCTGTGCTTACCATGGCCAAATACAACTCTGAATGATGGCAATGCCTGCAACGCTGAGGCGAGTGATGATTTCTAAAGGAAGGACGGTCCTTTTGCACATTGCATGCTATTGTGGAATGCTCTGGGTTTCTTGTAAAACTTAAGGgatttgtttttgtctttctgGGTTATTAGCTGTCCAAGCATTGTCGTTTCTATGGGAAAACCCTTTTTTTCACAAATTGGtcttctgaccaatcagatcagctctgaaaaatatctgatgagaaaagatctgatgtgattggtcagacCAATTGGTGGGGAAAAGAATATCAggattgggctgcctgtgtaaatgcagcctacgAGCTGTGATCTAGTGTATTATTGCTCAACAGTTTTGAGTACCTGATTACTGGTTTGTATAATGGACCAATGAGAGTATGTTGTTGACAATAAATGGCATGCATTATGCAGATCATGATGGCTTGTGTTGGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036947870.1 True 1216 mRNA 0.45 5 38855182 38857226

Neighbor

gene id symbol gene type direction distance location
LOC110489178 LOC106605114 coding upstream 7487 38823585 ~ 38847695 (+)
LOC110489163 LOC106605115 coding upstream 31741 38789536 ~ 38823441 (+)
LOC110489149 LOC106605176 coding upstream 68735 38757233 ~ 38786447 (+)
LOC110489135 LOC106605117 coding upstream 120784 38718292 ~ 38734398 (+)
sh3d21 LOC106605124 coding upstream 943852 37891951 ~ 37911330 (+)
LOC110489224 LOC106605111 coding downstream 41940 38899166 ~ 38916542 (+)
LOC110489198 mecr coding downstream 71012 38928238 ~ 38936143 (+)
LOC110489231 LOC106605109 coding downstream 84996 38942222 ~ 38952111 (+)
LOC110489269 LOC106605108 coding downstream 107328 38861507 ~ 38973957 (+)
LOC118944175 NA coding downstream 108122 38965348 ~ 38965501 (+)
G140318 NA non-coding upstream 3120 38850907 ~ 38852062 (+)
G140271 NA non-coding upstream 147874 38707079 ~ 38707308 (+)
G140264 NA non-coding upstream 155437 38699431 ~ 38699745 (+)
G140214 NA non-coding upstream 194970 38659946 ~ 38660212 (+)
G140363 LOC106605107 non-coding downstream 95609 38952835 ~ 38963883 (+)
G140325 NA non-coding downstream 116846 38974072 ~ 38974620 (+)
G140409 NA non-coding downstream 135777 38993003 ~ 38993230 (+)
G140595 NA non-coding downstream 149622 39006848 ~ 39007112 (+)
G139179 NA other upstream 803438 38051359 ~ 38051744 (+)
G139101 NA other upstream 911170 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 914468 37919735 ~ 37940714 (+)
G139004 NA other upstream 1031172 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2453211 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2682069 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3111148 41968374 ~ 41969317 (+)
G144661 NA other downstream 3653104 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4873646 43730872 ~ 43731218 (+)
G146091 NA other downstream 4911481 43768707 ~ 43769162 (+)

Expression


Co-expression Network