Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118939688 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 38857221 ~ 38858528 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005036648.1 | True | 947 | mRNA | 0.44 | 2 | 38857221 | 38858528 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110489178 | LOC106605114 | coding | upstream | 9526 | 38823585 ~ 38847695 (+) |
| LOC110489163 | LOC106605115 | coding | upstream | 33780 | 38789536 ~ 38823441 (+) |
| LOC110489149 | LOC106605176 | coding | upstream | 70774 | 38757233 ~ 38786447 (+) |
| LOC110489135 | LOC106605117 | coding | upstream | 122823 | 38718292 ~ 38734398 (+) |
| sh3d21 | LOC106605124 | coding | upstream | 945891 | 37891951 ~ 37911330 (+) |
| LOC110489224 | LOC106605111 | coding | downstream | 40638 | 38899166 ~ 38916542 (+) |
| LOC110489198 | mecr | coding | downstream | 69710 | 38928238 ~ 38936143 (+) |
| LOC110489231 | LOC106605109 | coding | downstream | 83694 | 38942222 ~ 38952111 (+) |
| LOC110489269 | LOC106605108 | coding | downstream | 106026 | 38861507 ~ 38973957 (+) |
| LOC118944175 | NA | coding | downstream | 106820 | 38965348 ~ 38965501 (+) |
| G140318 | NA | non-coding | upstream | 5159 | 38850907 ~ 38852062 (+) |
| G140271 | NA | non-coding | upstream | 149913 | 38707079 ~ 38707308 (+) |
| G140264 | NA | non-coding | upstream | 157476 | 38699431 ~ 38699745 (+) |
| G140214 | NA | non-coding | upstream | 197009 | 38659946 ~ 38660212 (+) |
| G140363 | LOC106605107 | non-coding | downstream | 94307 | 38952835 ~ 38963883 (+) |
| G140325 | NA | non-coding | downstream | 115544 | 38974072 ~ 38974620 (+) |
| G140409 | NA | non-coding | downstream | 134475 | 38993003 ~ 38993230 (+) |
| G140595 | NA | non-coding | downstream | 148320 | 39006848 ~ 39007112 (+) |
| G139179 | NA | other | upstream | 805477 | 38051359 ~ 38051744 (+) |
| G139101 | NA | other | upstream | 913209 | 37943742 ~ 37944012 (+) |
| G139089 | LOC106605123 | other | upstream | 916507 | 37919735 ~ 37940714 (+) |
| G139004 | NA | other | upstream | 1033211 | 37777061 ~ 37824010 (+) |
| LOC110488849 | LOC106605147 | other | upstream | 2455250 | 36354883 ~ 36405310 (+) |
| LOC110489834 | eny2 | other | downstream | 2680767 | 41539240 ~ 41541654 (+) |
| G143938 | LOC106605049 | other | downstream | 3109846 | 41968374 ~ 41969317 (+) |
| G144661 | NA | other | downstream | 3651802 | 42510330 ~ 42566030 (+) |
| G146054 | LOC100136012 | other | downstream | 4872344 | 43730872 ~ 43731218 (+) |
| G146091 | NA | other | downstream | 4910179 | 43768707 ~ 43769162 (+) |
