LOC118944175


Basic Information

Item Value
gene id LOC118944175
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 38965348 ~ 38965501 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005039486.1
ATGCACCAGATACGGACACTACTGTCCTCAGCCCAGTGCATCCTGGTGCCTGAGTTCCGTGACTGTTGGGTTTTAAGAAAGGTGCCACAGAAACATCAGTCCTGATATTTAAGCTCAGGAGTGCACTCTTGAGTTATGGCTCAGAGGCACGTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005039486.1 True 154 mRNA 0.51 1 38965348 38965501

Neighbor

gene id symbol gene type direction distance location
LOC110489231 LOC106605109 coding upstream 13237 38942222 ~ 38952111 (+)
LOC110489198 mecr coding upstream 29205 38928238 ~ 38936143 (+)
LOC110489224 LOC106605111 coding upstream 48806 38899166 ~ 38916542 (+)
LOC118939688 NA coding upstream 106820 38857221 ~ 38858528 (+)
LOC110533769 LOC106583263 coding upstream 108122 38855182 ~ 38857226 (+)
LOC110489273 LOC106605104 coding downstream 21568 38987069 ~ 38990470 (+)
LOC110489280 LOC106605103 coding downstream 35220 39000721 ~ 39044657 (+)
atp1a3 atp1a3 coding downstream 204772 39170273 ~ 39195284 (+)
LOC118944148 NA coding downstream 268859 39234360 ~ 39234415 (+)
LOC110489329 LOC106605098 coding downstream 271026 39236527 ~ 39255790 (+)
G140363 LOC106605107 non-coding upstream 1465 38952835 ~ 38963883 (+)
G140318 NA non-coding upstream 113286 38850907 ~ 38852062 (+)
LOC110489178 LOC106605114 non-coding upstream 117662 38823585 ~ 38847695 (+)
G140271 NA non-coding upstream 258040 38707079 ~ 38707308 (+)
G140264 NA non-coding upstream 265603 38699431 ~ 38699745 (+)
G140325 NA non-coding downstream 8571 38974072 ~ 38974620 (+)
G140409 NA non-coding downstream 27502 38993003 ~ 38993230 (+)
G140595 NA non-coding downstream 41347 39006848 ~ 39007112 (+)
G140598 NA non-coding downstream 49372 39014873 ~ 39015078 (+)
G140601 NA non-coding downstream 52710 39018211 ~ 39018430 (+)
G139179 NA other upstream 913604 38051359 ~ 38051744 (+)
G139101 NA other upstream 1021336 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1024634 37919735 ~ 37940714 (+)
G139004 NA other upstream 1141338 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 2563377 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2573794 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 3002873 41968374 ~ 41969317 (+)
G144661 NA other downstream 3544829 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4765371 43730872 ~ 43731218 (+)
G146091 NA other downstream 4803206 43768707 ~ 43769162 (+)

Expression


Co-expression Network