ubxn11 (ubxn11)


Basic Information

Item Value
gene id ubxn11
gene name ubxn11
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39469654 ~ 39485394 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021562252.2
GAACAACCCTTATTGTAGGTAGGCCTATAGACACATTAGCTCAATCaatttgtaaaaaaacaaacaagggAATACCCTGTCTGGCATTTTGGTTCCATTCACCTGAAAGAGAAAGGAAATAGGACCATTTTAGACATTTCACAACAATTTAGGCTGTTGCTTAAACGTTAACACAATACCTGGAAACGAATCATCACAGGTAAGTGCTATTCATGATATGTATACAACTTCTGACCTCTACATTGCTGAACTCTACAATCCATATGGCTAATCTCTACTTAATACTTTACTAATATTGATATTTTGGTTCTTACATTGACCTCTGTGGTTGAAGGATGCCTCACCTTGGCCTCTGTGAACACAGACAGCACCAGCAGGATGAAGACAGCACAGACCAGAGCTTCGTTAATGTTGAAGAGGGTTGAGTCTCTGAACAGCAAAAGTTTATCTGTGTTTATTTCAGCTAGAAGAGGATGGGTCTGAAAGGGATGTGTGCACCATGACTGCATGGGCACAAGTACAGAGATCTGTTTTACAGTCATGAGCAGTGTAAATTAACTTTAATAGGGCCTACAAATACTTGTTTTGATATTTGGCACTAGTGGGTATTTTTGTATTCTTTATTTTTTTCCATATATGCCAATAGCCTATTTAATGTCTTGTATTGTTATGTTTTGTATAGCATGCAATGGTATGTGTTCTGATGTAGGGCTAGGTGTGTGACAACTTTTGAAACAAAAGTAGACTAGTGTTTGGGTACATCATTCCATTTATATCAATGTTTGTCGATGGATGATCACAATGTCATACTTTGAATAACAATGTATCACTTTGGCTGATTCTTCACGGTGTGAAGGAGGGTGTATTTAATTCTGGAACCAGCAACGAGCCAATGAAATGTCACGATCCACGTTACCAATGGCAACGAACTCCAAACAATCATCTAGATGTAAAAGAAGAGCGAGCATAATATTCCAACCTACAGAATCTAGAGTCATTCACTTGTAAGTCATTCATAAATTCCTAGCATGACAAATAAAAGTTGATTTCGTTTATTAAGCCTATTAACTGAACCAAGTGTACACTTTCAGGACTTTTATTTTGCGTTTTTAGCTGCTATGTGCTTGCTTGTCAACCATGTCAATGTCAGCCAGGTGCTCATAAACATTGTGTTTTAAAAAAACTTTCATTGTTGAATCACAAAATTACCTCTACACTAGTCTGCTAGCCATTTGTGCATCCCATCGACCCCAAGTGTTTTATGGACGTAAGGAGATGAGCTCACCACTTTCAATGTTGAGGAAAACCCGACGTGTGCCTCTTCCCGGGCCCATGAACCAGCAAGGGAGAAGAGTGCCTTTCAAGGAGAATCCATTTTCAGAATATGAAGCTACTCTGCTGAATGATGTATCTGCTTTGAATCACCCTGCGCCTCAGGCTCAAGCCACTGATAGTGCCTGTCCTTCCAAATCAAAAGCCAAACAAAGGAAAAGCAACAGTTGTTGTGCACCCCCTAGTGATTTTGAGCTGATGTCCTCTATGATACAAAGGGTGACCCTGCTGGAGACCAAGGTGAAGACCCAAGCCCTGGACATTGACCACAAGGAGAAAATAATTACAGCTCTGGAGGAGAAAATTAAGCTTCTTCAGAAGTCAAAAGAAAAAAACAGTGATAGGAGCAGAGAGGATGATCTCATAAAAACATGCCACAGGCTTCAGGGCCAGGTATCGGAGATGGAGCGGTTTCTGAACGACTACGGCATGATCTGGGTGGGGAGCGGAGAGGAGCGTGACACAGCCAGTCAACAGGAAGTAGAGGAAGCTGAGCAGACCCAGAGCTCAGAGAGAGGGGTGTGGCAACCAGAGACCTCTGTGGCCAGGAGGAACTTCCAGATAAACTTTGACCTGGTGCTCCAGAACATCCAGCAGTTGAACATCCTGGCTGGGGAGGGAGAGTCCTACGTCAGGGTCACGTCCAGAGGGGCACAGCTGGCCCAGCAGCACCTCATTCCACTACGGCTCTACAGCAATGGCATCTTCATGTTCAATGGGCCCTTCCGCTCTTACCAGGAAGCCAGCACACAGCAGTGCATGCAAGACCTGATGGACGGATACTTCCCTTCTGAGCTACAGGACAGGTTTGCAGACGGGGTGCcctttcagGTTCACGACAGACGAGAGGAGGAATTCCAAGAGAGGCGACCGTGGGCGGAGTTCCCTGGGAAGGGGCAGGCTGTGGTTGGATGCACAGAGGGGGAGAAATTAACCGACAGCTTAGAACACGCCTACTGTACCGTCTCCCAGATACCCGGCAGAAAAATGACAATGGACCAATTCCTGAACAGGCTGCCCAAGGTGGTGGTGAAGGCTGGCAGAGTGATTGACATCAGGGACTCCGTGAAAGCCAGTCTACAGGGCTCTTCTGATGCTTCAAACAGCCATGCTGTGACCCTCATAGACACACCAGAGCTACAGGCTATGAAAGAGAGGTTGGAGTTGCATGAGACTGATCCCCATAACTCGGTCCGTGATGTCACCACACTGAGGGTGAAGTCAGAGGATGGCGAGCACACCTACATCATGAAGATGCATTTCTCAGAGACCATAGGTCATCTGCGCCAGTATCTGGACAAGCACAGGTGGACAGATGCCACAGCGTATGATATCATCAGTGCGTTCCCACAGCGCTGGTACAGTGAGGACTCTCAGACACTCCTCTCCTGTGGGCTCACTCCCAATGCTGCTCTGCTGCTCAGGACTAGGCCAGGCCCTCGTCAATGACAGAGCAACAAATCGCCCTGTCACTCTCCTCATGGTTATAAAATACTGTGTTTACTTTCATAAACATGTATATTCAGATCTGATAGGGATGTGACACTAGGGGGTGCCAACACTTACAGAACAATCCTTTTCAGGATCATCATGACATGGGAAAATCCTCATTTCCATAGGGACACTTGCATAATTATTGATGTAGATAATTCACCTTGAACCATgactgcttaaaaaaaaaaaaaaaaagtagagtTAGCGAAATAACATTGCATGAGCAAGATACAAGacttgctctcacacacacagtatttgtACATGGGCATGAGTTTCTTTTCATACTTTTGgggaccaaaacagcagagaCGTTTAGCCTGGCGCGCCAATGATCTTAGTTGTTGCGGAAAATTGGCCCACTATGCATCTACGTCATATCGCTGACTCTACCTTTAAAATGTAAGGATTTTAATCAAAGAAAATTACAAGATCAAAGCCAACTTATTGAAAACAAACTTTATTTCTAAAATGTGTAAATACAATTAAGGATAAAAAATATATTCAatataaacatttacatttttgaaaAATATTTGACATAAGGCAAGTTTGTCTAACTTTGTTAAAGCTCAAATGAAAACTCACATTAGTCTCATCTAGACAATGTTAGACATCCAAATGTCTGTCCCAACTTAGTGCCATGATGTTCGTCAACTGAAGGAAAGCATTTGATGTGACGTTCCATCAATAAATCAAACCACTTTTTTTTGCTCTTCGAACACTGAAACAAACTAGATGAAAGttagtgtttgatttgattttgatttgattttattaggatctcttttagtccccatttggactgATCTTCCAAGGGTccttaacattaaaatacaatttataatacaaacacactttcacata
>XM_021562244.2
AACAACCCTTATTGTAGGTAGGCCTATAGACACATTAGCTCAATCaatttgtaaaaaaacaaacaagggAATACCCTGTCTGGCATTTTGGTTCCATTCACCTGAAAGAGAAAGGAAATAGGACCATTTTAGACATTTCACAACAATTTAGGCTGTTGCTTAAACGTTAACACAATACCTGGAAACGAATCATCACAGGTAAGTGCTATTCATGATATGTATACAACTTCTGACCTCTACATTGCTGAACTCTACAATCCATATGGCTAATCTCTACTTAATACTTTACTAATATTGATATTTTGGTTCTTACATTGACCTCTGTGGTTGAAGGATGCCTCACCTTGGCCTCTGTGAACACAGACAGCACCAGCAGGATGAAGACAGCACAGACCAGAGCTTCGTTAATGTTGAAGAGGGTTGAGTCTCTGAACAGCAAAAGTTTATCTGTGTTTATTTCAGCTAGAAGAGGATGGGTCTGAAAGGGATGTGTGCACCATGACTGCATGGGCACAAGTACAGAGATCTGTTTTACAGTCATGAGCAGTGTAAATTAACTTTAATAGGGCCTACAAATACTTGTTTTGATATTTGGCACTAGTGGGTATTTTTGTATTCTTTATTTTTTTCCATATATGCCAATAGCCTATTTAATGTCTTGTATTGTTATGTTTTGTATAGCATGCAATGGTATGTGTTCTGATGTAGGGCTAGGTGTGTGACAACTTTTGAAACAAAAGTAGACTAGTGTTTGGGTACATCATTCCATTTATATCAATGTTTGTCGATGGATGATCACAATGTCATACTTTGAATAACAATGTATCACTTTGGCTGATTCTTCACGGTGTGAAGGAGGGTGTATTTAATTCTGGAACCAGCAACGAGCCAATGAAATGTCACGATCCACGTTACCAATGGCAACGAACTCCAAACAATCATCTAGATGTAAAAGAAGAGCGAGCATAATATTCCAACCTACAGAATCTAGAGTCATTCACTTTCTGCTAGCCATTTGTGCATCCCATCGACCCCAAGTGTTTTATGGACGTAAGGAGATGAGCTCACCACTTTCAATGTTGAGGAAAACCCGACGTGTGCCTCTTCCCGGGCCCATGAACCAGCAAGGGAGAAGAGTGCCTTTCAAGGAGAATCCATTTTCAGAATATGAAGCTACTCTGCTGAATGATGTATCTGCTTTGAATCACCCTGCGCCTCAGGCTCAAGCCACTGATAGTGCCTGTCCTTCCAAATCAAAAGCCAAACAAAGGAAAAGCAACAGTTGTTGTGCACCCCCTAGTGATTTTGAGCTGATGTCCTCTATGATACAAAGGGTGACCCTGCTGGAGACCAAGGTGAAGACCCAAGCCCTGGACATTGACCACAAGGAGAAAATAATTACAGCTCTGGAGGAGAAAATTAAGCTTCTTCAGAAGTCAAAAGAAAAAAACAGTGATAGGAGCAGAGAGGATGATCTCATAAAAACATGCCACAGGCTTCAGGGCCAGGTATCGGAGATGGAGCGGTTTCTGAACGACTACGGCATGATCTGGGTGGGGAGCGGAGAGGAGCGTGACACAGCCAGTCAACAGGAAGTAGAGGAAGCTGAGCAGACCCAGAGCTCAGAGAGAGGGGTGTGGCAACCAGAGACCTCTGTGGCCAGGAGGAACTTCCAGATAAACTTTGACCTGGTGCTCCAGAACATCCAGCAGTTGAACATCCTGGCTGGGGAGGGAGAGTCCTACGTCAGGGTCACGTCCAGAGGGGCACAGCTGGCCCAGCAGCACCTCATTCCACTACGGCTCTACAGCAATGGCATCTTCATGTTCAATGGGCCCTTCCGCTCTTACCAGGAAGCCAGCACACAGCAGTGCATGCAAGACCTGATGGACGGATACTTCCCTTCTGAGCTACAGGACAGGTTTGCAGACGGGGTGCcctttcagGTTCACGACAGACGAGAGGAGGAATTCCAAGAGAGGCGACCGTGGGCGGAGTTCCCTGGGAAGGGGCAGGCTGTGGTTGGATGCACAGAGGGGGAGAAATTAACCGACAGCTTAGAACACGCCTACTGTACCGTCTCCCAGATACCCGGCAGAAAAATGACAATGGACCAATTCCTGAACAGGCTGCCCAAGGTGGTGGTGAAGGCTGGCAGAGTGATTGACATCAGGGACTCCGTGAAAGCCAGTCTACAGGGCTCTTCTGATGCTTCAAACAGCCATGCTGTGACCCTCATAGACACACCAGAGCTACAGGCTATGAAAGAGAGGTTGGAGTTGCATGAGACTGATCCCCATAACTCGGTCCGTGATGTCACCACACTGAGGGTGAAGTCAGAGGATGGCGAGCACACCTACATCATGAAGATGCATTTCTCAGAGACCATAGGTCATCTGCGCCAGTATCTGGACAAGCACAGGTGGACAGATGCCACAGCGTATGATATCATCAGTGCGTTCCCACAGCGCTGGTACAGTGAGGACTCTCAGACACTCCTCTCCTGTGGGCTCACTCCCAATGCTGCTCTGCTGCTCAGGACTAGGCCAGGCCCTCGTCAATGACAGAGCAACAAATCGCCCTGTCACTCTCCTCATGGTTATAAAATACTGTGTTTACTTTCATAAACATGTATATTCAGATCTGATAGGGATGTGACACTAGGGGGTGCCAACACTTACAGAACAATCCTTTTCAGGATCATCATGACATGGGAAAATCCTCATTTCCATAGGGACACTTGCATAATTATTGATGTAGATAATTCACCTTGAACCATgactgcttaaaaaaaaaaaaaaaaagtagagtTAGCGAAATAACATTGCATGAGCAAGATACAAGacttgctctcacacacacagtatttgtACATGGGCATGAGTTTCTTTTCATACTTTTGgggaccaaaacagcagagaCGTTTAGCCTGGCGCGCCAATGATCTTAGTTGTTGCGGAAAATTGGCCCACTATGCATCTACGTCATATCGCTGACTCTACCTTTAAAATGTAAGGATTTTAATCAAAGAAAATTACAAGATCAAAGCCAACTTATTGAAAACAAACTTTATTTCTAAAATGTGTAAATACAATTAAGGATAAAAAATATATTCAatataaacatttacatttttgaaaAATATTTGACATAAGGCAAGTTTGTCTAACTTTGTTAAAGCTCAAATGAAAACTCACATTAGTCTCATCTAGACAATGTTAGACATCCAAATGTCTGTCCCAACTTAGTGCCATGATGTTCGTCAACTGAAGGAAAGCATTTGATGTGACGTTCCATCAATAAATCAAACCACTTTTTTTTGCTCTTCGAACACTGAAACAAACTAGATGAAAGttagtgtttgatttgattttgatttgattttattaggatctcttttagtccccatttggactgATCTTCCAAGGGTccttaacattaaaatacaatttataatacaaacacactttcacata

Function

symbol description
ubxn11 Predicted to enable ubiquitin binding activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Orthologous to human UBXN11 (UBX domain protein 11).

NR:

description
UBX domain-containing protein 11 isoform X1

GO: NA

KEGG:

id description
K24353 UBXN11; UBX domain-containing protein 11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021562252.2 False 3693 mRNA 0.43 14 39469654 39485394
XM_021562244.2 True 3476 mRNA 0.43 15 39469655 39485394

Neighbor

gene id symbol gene type direction distance location
LOC110489505 csn7a coding upstream 29228 39430606 ~ 39440426 (+)
LOC110489499 LOC106605088 coding upstream 49653 39413456 ~ 39420001 (+)
LOC110501538 LOC100301666 coding upstream 59135 39403821 ~ 39412741 (+)
LOC110489493 LOC100169854 coding upstream 84623 39379592 ~ 39385031 (+)
LOC110489446 ubp5 coding upstream 91366 39366408 ~ 39378288 (+)
LOC110489537 LOC106605082 coding downstream 14751 39500145 ~ 39520622 (+)
LOC110489572 LOC106605173 coding downstream 36169 39521563 ~ 39524931 (+)
LOC110489581 LOC106605172 coding downstream 42208 39527602 ~ 39530858 (+)
LOC110489590 LOC106605080 coding downstream 55312 39540706 ~ 39547363 (+)
znf407 LOC106605077 coding downstream 84091 39569485 ~ 39766378 (+)
G140809 NA non-coding upstream 31070 39437955 ~ 39438584 (+)
G140794 NA non-coding upstream 39345 39430099 ~ 39430309 (+)
G140793 NA non-coding upstream 46974 39422358 ~ 39422680 (+)
G140792 NA non-coding upstream 66029 39403334 ~ 39403625 (+)
G140834 NA non-coding downstream 16693 39502087 ~ 39502310 (+)
G140804 NA non-coding downstream 31099 39516493 ~ 39550773 (+)
G141146 NA non-coding downstream 75485 39560879 ~ 39561194 (+)
G141148 NA non-coding downstream 77041 39562435 ~ 39562737 (+)
G141226 NA non-coding downstream 210967 39696361 ~ 39699522 (+)
G139179 NA other upstream 1417910 38051359 ~ 38051744 (+)
G139101 NA other upstream 1525642 37943742 ~ 37944012 (+)
G139089 LOC106605123 other upstream 1528940 37919735 ~ 37940714 (+)
G139004 NA other upstream 1645644 37777061 ~ 37824010 (+)
LOC110488849 LOC106605147 other upstream 3067683 36354883 ~ 36405310 (+)
LOC110489834 eny2 other downstream 2053901 41539240 ~ 41541654 (+)
G143938 LOC106605049 other downstream 2482980 41968374 ~ 41969317 (+)
G144661 NA other downstream 3024936 42510330 ~ 42566030 (+)
G146054 LOC100136012 other downstream 4245478 43730872 ~ 43731218 (+)
G146091 NA other downstream 4283313 43768707 ~ 43769162 (+)

Expression


Co-expression Network