LOC118940039


Basic Information

Item Value
gene id LOC118940039
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 39499737 ~ 39501488 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036948182.1
AAAGAGGTAGTGCTGAATTTCCCCAAACTTCTTTGCAGCTTCTATTTATTACAGCTGGTGGTCTGTCTTGGTGAGGCAAAGTGTTCCGTTCACAAGCTGGAGACAGGCATCCAAGGGAAGTCAATGCCATGGTTCTGGAGATTGTGTGGAGACTATTGTCACCAGTGCAGTGGAGCCTGTGTCTTCTATCCCTTCTGCTTCCCATAGTATCAATGATATGTGCGATCCGTTCAAAAAGTAGAAAGACTTCCAGGTTGTCATTGGCTGAAATGGGACCGATCTCTGGTGAAAGGCCCCCAGATTCAACTGAGGCCAAGACCTCAGAACTAAGGAAGAATATCATTGGACCAGCATCCTCAAAAAGAAAGTCAACCCAGTCCCAAAGAGGGCACAGAGGGTCTTTCCCAGGGCAGAACACCCCAAGGCCGGTGAAGAAGGCTTTGAGGCAGTTGCCTCCCTTACCTGAGCTGGAGAAGAGCAGTGTCCGAAGACACAGCAGCTACACTGGGTCCGTAGTGTATGACGTTGTCGCCACAGAGGTTTGTAATCCATGGCCCACTACAGACAACCAGgcttctcaacaacagacagcaGACGGCAGCAACCACCTGGAGGAGGTAGATGAAAAGGGGGAAGTTCCGTTCCCTGTCTATGCCAAAGTCAACAAAACCAAAGTTTGCTCGAACTCATCAAGACGTTCACCACTGTATGCCAAAGTGAACAAGACTAGCTCCCGGACTGTGAAATCTTAACTACTGTTCTGGGGTGACTGATAAGTCAACACTGTGACCGATATGTCCTCCAAATGCGAAATAGTCTACTATGCTTTATGCTTAACTCGTTTTGTTCTTTCTTAAATGTTTATATGCGTATGTGTTTCTTATGTTGTTTCTCAGGCCCGCAATGCTACAAAGGCACAGAAATGACTTCTGTTGTAATTTACTTGGGTCTCAAGACAATAAATGAAGTTTGTTTGCTCTA

Function

NR:

description
uncharacterized protein LOC109902192

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036948182.1 True 981 mRNA 0.46 5 39499737 39501488

Neighbor

gene id symbol gene type direction distance location
LOC110501545 NA coding downstream 2176 39487555 ~ 39497561 (-)
si:ch211-154o6.3 LOC106605084 coding downstream 34131 39449495 ~ 39465606 (-)
LOC110489516 LOC106605085 coding downstream 50403 39442306 ~ 39449334 (-)
LOC100301666 LOC100301666 coding downstream 87167 39410248 ~ 39412570 (-)
LOC110489468 LOC106605089 coding downstream 133865 39350932 ~ 39365872 (-)
nr0b2a LOC106605079 coding upstream 52315 39553803 ~ 39555433 (-)
LOC110489623 zadh2 coding upstream 312635 39814123 ~ 39821845 (-)
LOC110489634 LOC106605073 coding upstream 502282 40003770 ~ 40078999 (-)
LOC110489653 LOC106605072 coding upstream 723585 40224622 ~ 40298333 (-)
LOC110489712 LOC106605066 coding upstream 1352727 40854215 ~ 40861194 (-)
G141091 NA non-coding downstream 28977 39470402 ~ 39470760 (-)
G141090 NA non-coding downstream 29861 39469660 ~ 39469876 (-)
G141082 NA non-coding downstream 71958 39427547 ~ 39427779 (-)
G141081 NA non-coding downstream 73303 39422834 ~ 39426434 (-)
G141079 NA non-coding downstream 78599 39420812 ~ 39421138 (-)
G141108 NA non-coding upstream 15034 39516522 ~ 39550549 (-)
G141138 NA non-coding upstream 54470 39555958 ~ 39556282 (-)
G141147 NA non-coding upstream 59436 39560924 ~ 39561351 (-)
G141338 NA non-coding upstream 217509 39718997 ~ 39719255 (-)
G141352 NA non-coding upstream 240900 39742388 ~ 39742618 (-)
G140879 NA other downstream 435319 39063862 ~ 39064418 (-)
G140479 NA other downstream 671542 38827909 ~ 38828195 (-)
LOC110489105 LOC106605178 other downstream 1451071 38046700 ~ 38048666 (-)
G139231 NA other downstream 1746779 37747441 ~ 37752958 (-)
LOC110501508 LOC106605132 other downstream 2035979 37442359 ~ 37463839 (-)
G141363 LOC106605077 other upstream 262445 39763933 ~ 39765473 (-)
G142918 NA other upstream 1361726 40863214 ~ 40863721 (-)
LOC110489860 LOC106605053 other upstream 2213058 41714269 ~ 41730507 (-)
G145010 NA other upstream 3205330 42706818 ~ 42707279 (-)

Expression


Co-expression Network