XLOC_002063


Basic Information

Item Value
gene id XLOC_002063
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 20377088 ~ 20381313 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00005870
gttattttaaagTTTCTTCCGGTCATTCAGGTGACTTCTTCTGTCTGGAGCATCAGACCAATCATCTGGTGTCCAGAATGAGGTGGTTTGTCTTGGTCGGGCATCTCAActgagacctgtccactatgggtgaccctatcggtagctgtgaagtaccagtggcgtagctctcagcatcactgatgcacacaagccctcacagcacgtcaagctgcaaaccgtgtgagggaccctaacctaccctaacACAACACTAACAACCCTAACAACCACTAACGTGCCAAAAACCACTCAGAGACCAGCAACACACAAGAAACCACCTAGAAAACCTTGCTAAGCACATGTCAACCTACAGCAAACCATCCAAAAGAATCCAAGAGCCGAATACCAACAGCGCCGACAATCACCAAAACATCCAGCAATGTaatgaaaatttaattaaaagtgaAATTTCATGTATTGCAAACTTATTCTataactatatacaatatatacagtatgtacatacgtGCCCATAATCTTCCATCTGGCACTAGGATGGCTCAGTGCCTGGGCCTCTTCCTCCGGGGCTCCTTGGGCAGCGGCTCCTTGCTGATGTCCACCATGATATGAGGGGGGACACTGGACCCAGATCTGATCTCGCTGATGAACACACGTCCATCAGCCTGCTCGGTCTCCAACAGTGCAGGCCGGTCCAGcttctcccacagccgctgctttaTCTTCAATCCGTACTGGAGAGTGTATCGACCTGTCCGCTTCTTCACGATGGAGTCCATCACACTGCGGTAGATGTGCTGATATTCCTGCACACTCCAACCGTGGATGGAGATCGGCTCCTCCTGTAGACACTCACCCACTGAGGAGATTGAAGCTGCGGGACAGAGGACAGGAAGGACAGCTCTGTTCTTCAGGTGTCGCTGCTCCACGGAAGTGTCCGACATGCAGCTGTTAGTGTCAGGCCCGGCCGCCGCTGCGTGCTCCTCAACAGAAGAGACGCGATCCAGCAAGAAGTCCTTGAGGTGTCTGGGGAGAGTCCTGGTCCTACTCGAGCGTCGCAGAGTCATCATGAACAACTTCCCAAACTGATGATAATGACCACCCTTTTTCATGGTGCCATTTACTGTGATTTGGCTCCCTGATCCTCAAAGCAGGCATCATACTTGGGTTGCCATGATCGCCATACTGCTATGATGAC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko03070 Bacterial secretion system
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00005870 True 1198 lncRNA 0.50 2 20377088 20381313

Neighbor

gene id symbol gene type direction distance location
XLOC_002062 golga7 coding upstream 4819 20364009 ~ 20372269 (+)
XLOC_002061 TCIM coding upstream 119913 20256454 ~ 20257175 (+)
XLOC_002060 ppp3ccb coding upstream 142705 20180163 ~ 20234383 (+)
XLOC_002059 xpo7 coding upstream 230544 20070178 ~ 20146544 (+)
XLOC_002058 CABZ01059623.1 coding upstream 651494 19602334 ~ 19725594 (+)
XLOC_002064 r3hcc1 coding downstream 10770 20392083 ~ 20402161 (+)
XLOC_002065 NA coding downstream 67154 20448467 ~ 20452630 (+)
XLOC_002066 NA coding downstream 120463 20501776 ~ 20502178 (+)
XLOC_002067 letm2 coding downstream 208656 20589969 ~ 20626795 (+)
XLOC_002068 prnpb coding downstream 247385 20628698 ~ 20632779 (+)
XLOC_002056 CABZ01059627.3 non-coding upstream 787355 19583289 ~ 19589733 (+)
XLOC_002045 AL928714.1 non-coding upstream 1574653 18798927 ~ 18802435 (+)
XLOC_002043 NA non-coding upstream 2094653 18240550 ~ 18282435 (+)
XLOC_002042 NA non-coding upstream 2305582 18007123 ~ 18071506 (+)
XLOC_002069 NA non-coding downstream 262022 20643335 ~ 20645459 (+)
XLOC_002070 NA non-coding downstream 283703 20665016 ~ 20667861 (+)
XLOC_002071 BX548043.1 non-coding downstream 302723 20684036 ~ 20684150 (+)

Expression


Co-expression Network