LOC118936750



Basic Information


Item Value
gene id LOC118936750
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42686139 ~ 42687000 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>LOC118936750
ATGTTAGAGACCCTGCCCCGCCACAAAGCGGAGGTGTTCAGAAAACTCCTGTCTGGTCCCCGTACGCACTACCCCCTATGCACTGAACCTGGCAAAGCCTTTACAAAAGCTTTTCTCTGTGAAACTAGGAAGTACTACGGTGCCAGGTCAGAGTCTGTCAACTTTGAGTCAAATGCAGAGGCAGCTAGGGTTAATATTAACTGGGTGGATAAAAAGACAGAGGGAAAACTCCAGGACCGGTTGCAAAAGGGAGCTGTCAACAACCAAAACTCGTTGGTGAATGCCATTTATTGCAAGTGAGGCAAGGAGTTCAAGGAGAGATCCACCAGAAAAGATCAGTTCAAGGTGAGAAGAAATTAGAGTAAACCAGTGAAAATTATGTATCAGGAGAGCATGTTCTGCTTGACCTTAATCCCTGAGGTCAACTTCTAGATTCTGGAGTGATCTGAGCATGATCCCAGAAGAGATAGAAGACAAACTGGGCTGGAGAAGCTGAAGAGGGAGCTCACGTATGATACGTTTGTTGCATGGACCAGGTGGGACATATGCACTTCCCCAGATTGAAGATGGAGAAGACCTGCGACCTAAAAGCAGTTCTGGTCAGCATGGGCATGATGGACTCCTTTGAAGAGTTCAGGAGCAATTTCTCAGGTACGTCACCCAACACCCACCCAACAACCTGGAGATGCCTTTGTAGAGGTGAATGAGGAAGGCACCGAAGGCTGCAGCTGCCACAAGGCGGTCTCCCTGATCAGTAATGTTAAATATACATACCTTCAAAACAGACCACCCCTTTCTGTTCTTCATGCGCCACAACAATACTCAAAACATCCTCTTCTGTGGCAGGTACTGCTCCCCTTAA

Function


NR:

description
PREDICTED: leukocyte elastase inhibitor-like

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
LOC118936750 True 862 mRNA 0.47 1 42686139 42687000

Neighbor


gene id symbol gene type direction distance location
LOC110489980 LOC106605028 coding downstream 168858 42510322 ~ 42517281 (-)
LOC110489971 LOC106605027 coding downstream 184242 42495466 ~ 42501897 (-)
LOC118940237 NA coding downstream 345666 42314091 ~ 42340473 (-)
LOC110489954 LOC106605048 coding downstream 462381 42217647 ~ 42223758 (-)
LOC110501561 LOC106605047 coding downstream 585844 42085411 ~ 42100295 (-)
LOC110490045 LOC106605033 coding upstream 37078 42724078 ~ 42727549 (-)
LOC110490051 LOC106581764 coding upstream 92410 42779410 ~ 42792775 (-)
LOC110501576 LOC106605029 coding upstream 235668 42922668 ~ 42962273 (-)
clec3ba tetn coding upstream 297409 42984409 ~ 42986551 (-)
LOC110490077 LOC106605036 coding upstream 311825 42998825 ~ 43019825 (-)
G144995 NA non-coding downstream 2794 42681408 ~ 42683345 (-)
G144968 LOC106605035 non-coding downstream 43446 42640499 ~ 42642693 (-)
G144941 NA non-coding downstream 93535 42588558 ~ 42592604 (-)
G144654 NA non-coding downstream 272137 42413717 ~ 42414002 (-)
G144621 NA non-coding downstream 287989 42397901 ~ 42398150 (-)
G145015 NA non-coding upstream 30734 42717734 ~ 42717959 (-)
G145019 NA non-coding upstream 33720 42720720 ~ 42720929 (-)
G145025 NA non-coding upstream 44368 42731368 ~ 42731714 (-)
G145026 NA non-coding upstream 45136 42732136 ~ 42732458 (-)
LOC110489860 LOC106605053 other downstream 955717 41714269 ~ 41730507 (-)
G142918 NA other downstream 1822418 40863214 ~ 40863721 (-)
LOC110489653 LOC106605072 other downstream 2444735 40224622 ~ 40298333 (-)
G141363 LOC106605077 other downstream 2920666 39763933 ~ 39765473 (-)
G140879 NA other downstream 3621721 39063862 ~ 39064418 (-)
G145010 NA other upstream 19818 42706818 ~ 42707279 (-)
G145767 NA other upstream 583717 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 685840 43372725 ~ 43392160 (-)
LOC110490298 LOC106605170 other upstream 1089063 43776063 ~ 43783884 (-)
LOC110490352 NA other upstream 1747790 44434790 ~ 44464449 (-)

Expression



Co-expression Network