LOC110533774


Basic Information

Item Value
gene id LOC110533774
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42876224 ~ 42877363 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021618290.2
CTGAGAGCCAGTCGACCGGTCAGCTTGCCTTACTGCAAGAAATGGAACAACTTAACCCCTCCACCTCTAATGCCTCCTTCTGGGGTCTGGCTCCTGgcatggccttgtctctgtactgccTGCTCGGTATTCCTGGTAACATTGCAGTTATAGTCGTCCTCCGTCAGAACCAAGATCTATCCAGTTTGAGCAGGAGACTGATGTTGAACTTGGCTGCATCGGACCTACTCTGCATCCTTACCCTACCTTTGCGTATCTACAACCTAGTCTTCACCTGGAGCCTGGGTTTAGTGCTCTGTCAGCTCAACATGTACTTCTTCTACTGCAGTATCTGTACCGGTCTGCTGACTGTCACACTTCTgagcatccagcactacctccaGGTGGTGCATTCTCACAGCTGGGCCAGACCGGGATTGGCAAAGGAGAGGGTGCTACTGGTTGTCCTGTGGGGGGTAGCTGGGGTCCTGTCCATTCCTTATGGGGTGACGGTGCGGGATGTGAAGGATGATAATGGATGGGTCAGGTGCCAGTATGATTTTGCATCAGATGCTGAGCTGGTGGCTGTGTTGCTCCTGCAGACTCTGCTGTCATTTGTAGTTCCtttctccatcatggccacagcCTATATGCGCCTCCAGCGAAGGGTGAACCAAACAGCTTTCTTCAGGAGCCACAGGACAACCAGATTAGTGAGCCTTATCGTTGGGACCTTCATCGTTCTATGGACTCCTCACCATGTCATGAATGTGCTGGGAGTGACAGCCATCTTGGCAAAGAATAAGGCTCTGAGAGTGTTCTGGGAGGACAATTGGAGGATTGCTGGATCTCTGGTCTTCATCAACAGCAGCTTGGATCCATTCCTCTATGCCTTTGCCTCCAGAAACAACCAGAGAGCACAGAGCAGCGACGTTCAGGTAGTGACCACGAGTAGTCACAATCTGTAAGATTTCAAGTCACTCATTGGTAATTTCAACCATTGAAATGTTCCCCTTGATACAGGCAAATACGACACACATATACCGTATTGAGATTAGCACACCTGTCCTAACTTGTAATAACCACCCCGAAAAACAAAGGACCTGTATGCATTGTTTATGTTTATTGTAAACCTTTAAATTATGTTTAAATAAAGTAATA

Function

NR:

description
leukotriene B4 receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021618290.2 True 1140 mRNA 0.49 1 42876224 42877363

Neighbor

gene id symbol gene type direction distance location
LOC110490029 LOC106605030 coding upstream 192875 42664424 ~ 42683349 (+)
LOC110490022 LOC106605035 coding upstream 234064 42617702 ~ 42642160 (+)
LOC110490015 LOC106605038 coding upstream 259736 42593932 ~ 42616488 (+)
LOC110489996 pnisr coding upstream 283672 42582359 ~ 42592552 (+)
LOC110489991 LOC106605026 coding upstream 303551 42529081 ~ 42572673 (+)
LOC110501569 mms22l coding downstream 850 42878213 ~ 42910743 (+)
LOC110490056 LOC106605039 coding downstream 93652 42971015 ~ 42975154 (+)
LOC110490064 LOC106605040 coding downstream 98037 42975400 ~ 42978004 (+)
LOC100301866 LOC106584110 coding downstream 148037 43025400 ~ 43042479 (+)
LOC110490122 LOC106605034 coding downstream 213675 43091038 ~ 43097854 (+)
G145045 NA non-coding upstream 109806 42766106 ~ 42766418 (+)
G145044 NA non-coding upstream 113714 42762201 ~ 42762510 (+)
G145043 NA non-coding upstream 114925 42760981 ~ 42761299 (+)
G144812 NA non-coding upstream 144089 42731930 ~ 42732135 (+)
G144731 NA non-coding upstream 232286 42642203 ~ 42643938 (+)
G145191 NA non-coding downstream 18069 42895432 ~ 42895766 (+)
G145211 NA non-coding downstream 52739 42930102 ~ 42933210 (+)
G145224 NA non-coding downstream 71558 42948921 ~ 42949201 (+)
G145271 NA non-coding downstream 145620 43022983 ~ 43023204 (+)
G145310 NA non-coding downstream 211451 43088814 ~ 43089105 (+)
G144661 NA other upstream 310194 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 906907 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 1334633 41539240 ~ 41541654 (+)
G139179 NA other upstream 4824480 38051359 ~ 38051744 (+)
G139101 NA other upstream 4932212 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 853509 43730872 ~ 43731218 (+)
G146091 NA other downstream 891344 43768707 ~ 43769162 (+)
G146114 NA other downstream 922041 43799404 ~ 43799853 (+)
G146165 NA other downstream 1009233 43886596 ~ 43889609 (+)
G146226 NA other downstream 1119417 43996780 ~ 43997065 (+)

Expression


Co-expression Network