LOC110501576 (LOC106605029)


Basic Information

Item Value
gene id LOC110501576
gene name LOC106605029
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 42922668 ~ 42962273 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110501576
TCAATGCATGTGACCATATCAAGAGGCGGGGTTTGAATGTTACAatttagctaacacaatgtaACCATCTCAAGTGTCCAATATAACGGACTGAAAAACCGCAGACTAACTTGGTATTCAGCACTCGTTTCAACTGCTCACCACAAATGCAACAGAAACGGATATCAAATGGTAGAAAACAGATTGTCAACAAAACGGAACCGCTGAGAGGACAGGGCCAGAGAACAGTCATATGAGGCTAATGCAGGAAGTAACTGCAGCCCTAAGGAATCACAGAATACTgttccacctcttctctccttctccggGAGCATGCCATCTGAACCTTGTGTCAGGTATTCCAAGACGGGTGAAGACTTCCACTGGGCTAGAGTCAGCACACCATTTGCTGTTGATGAAGAGTCATACCCCTCCCCTTCTAGGATTTCTCTGAATCCAATGTCCTGTTCGCTTGGTGAATGGAGAATCCATCGAGTTGGATAGCCATGGGGGTATCTTTTCCAAAAGCAATGTTTCAGAAAAGCATTGTATTGTAATATTGCAGTTATGAGAGTCCTGCTGATATCAAATTCATGATTGGAGGTCATCCATCATCCATCTTATTATCAAGTGTCTGGCCAATAAAATGGAGGGAAGAGTTGGCCGGTTATCTAtcggttgtttgtttgttttgtgtgtgctgATCAAGCAAAAATATGAACTTCCGTTCTCTCTAAGACAATGGGCAATatagttttttattattattttttgccgGTGGAACAGGCGGCTATATcggtccactaatacaggactagtaaagacccagtGCACTATTTTTCGTATTTATTATTATGATATTTCAGGGGGTgcttcagcacccctacttctcGCATCTGAGGCCATATACAGTTGTTTTTGTAATTCAACTATGCTGTAGCCTATTTATAGATCAGGTTTGCTGTGCCTATGTCTgaggtctcctctctctgtctcttgtctctctctctctctctctctctctctgtctgtgtgtgtgtgtgttctcaggtcATGTTCAGTCTGTGCATGGTGGAGAGTGAGGCAGATGAGGTGACTCTTCAGGGAGTGACAAGTGTGGGACTGAAACATGCACTAGACTTTGCCTACACAGGACAGGAGCTGAACAGTGTTAATTACCTGGACCTGTACCGTGTGGCCGATCTGTTCCACCTCCCTGCTCTGGAGGAGGCTGTGGTCAGCTTCCTGGTAGAACACCTGTCTGAGCTGCAGCAGAGCCGCCTGGAGGAGGTGCTGCTGCTCCCCTACCgcctcctcagggatgtgttgaTGAGCGACCGCCTCACCTCCCTCAACGAGGAGGAGATCTGGCAGCTGGTGGTGTGCTGGTTAGAGCATGACTGTCGGTACCAGTACACAGAGGACCTGATACAGCACGTTCGTTACGGCCTTATGGATGTGGCCGCCCTGCACCACGTGGCACAGTGCCACCCGCTGGTCCAGTCCAGTGCCACCGCCTCCGCCCTAGTGGACGAGGCTCTAGAGTACCACCGTGCCACCTTCGCCCAACCCCTCCGCCAGACCGCCCACACCAAGCCCCGCTTCCAGTCTCCCACCCTCTACATTGCCGGCGGGCGCAAGCGCGAGGTGAGCCGCGTGCGGGAGCTGCGCTACTTCAACCCAGCCGCCCAGGAGAACGTGCGCGTGGCCGGGTGCTCCAACTGGAGCGAGCTGGCGCCAATGCCCGCTGGGCGCAGCCACCACTGCGTGGCCGTCATGGGCCACTTCCTGTTTGTGGCAGGCGGTGAGGTGGAGCATTCCACGGGGAGAACGTGTGCGGTGAGGACAGCCTGTCGGTACGACCCCCGGGGGAACCGCTGGACGGAGATAGCCTCCATGAAGGCGTGCAGGGAACACTTTGTCCTGGGGGCTCTGGGCCAGTACCTGTACGCGGTGGGGGGGAGGAACGAACTGAGACAGGTGCTGCCCACCGTGGAACGCTACTGTCCGAAGAGGAACAAGTGGACCTTCGTCCAGTCCTTTGACCGCTCGCTGTCCTGCCATGCAGGCAGTGTGGCTGACGACCTGCTCTGGgtctcagGTGGAGTCACAAACACAGCTCAGTACCAGAATAGACTGATGGTGTACAACCCAGAACAGaacAAGTGGCTGGCCCATGCTACAGAGGCGAGTGTACCATGTCATGGCCGTGGCGAGAAGGCTGGGAGGAAATGACCTGGACTACAACAACGATCGCATCCTGGTCCGCCACATCGACTCCTATGACATAGACATGGACCAGTGGACCCGCTGCACCTTCAGCCTACTCACGGGTCAGAACGAATCTGGCGTGGCAGTCCATGATGACCGAATCTATGTTGTCGGTGGATATTCTATTTGGACCAATGAGCCCCTAGCGTGTATTCAGGCGAGTGACCTTGACAGGTTTATGTAACCTAAAAAATTGTATGTATTATTAAACTATGCTGTGCGTAGTTTATaaggttataatgcattatgggGAAAGAGGGTATTCATAGCAAATGTTATCTTATTACAATATTCTATTGTTTCCTAGGAACgcaaagcgaggcggccatctctgtcggcgccggaagtacacGTCTATTGTTCCATGTGCATGACATGTTTATTTCACTTCCTGTTGTCCAGGTGTTAGATGTGAGCatggaggggaaggaggaagtgTTCTACGGACCAACTCTACCGTTCGCCTCCAATGGAATAGCAACGTGTTTCCTCCCTGCTCCATGCTTCACCTGCCCCAACCTACAGACTCTACAAGTGCCCCATCACAGGATAGGGGCTTTCTAACACACTAATAGAGACTACAGAGACTacagagactatagagactaatagagaccattgttactctaacttccgcgacgcatataaggccctgccccgcccccctttcggaaaagctgaccacgactc

Function

NR:

description
PREDICTED: kelch-like protein 32 isoform X2

GO: NA

KEGG:

id description
K10468 KLHL32; kelch-like protein 32

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110501576 True 2940 mRNA 0.51 8 42922668 42962273

Neighbor

gene id symbol gene type direction distance location
LOC110490051 LOC106581764 coding downstream 129893 42779410 ~ 42792775 (-)
LOC110490045 LOC106605033 coding downstream 195119 42724078 ~ 42727549 (-)
LOC118936750 NA coding downstream 235668 42686139 ~ 42687000 (-)
LOC110489980 LOC106605028 coding downstream 405387 42510322 ~ 42517281 (-)
LOC110489971 LOC106605027 coding downstream 420771 42495466 ~ 42501897 (-)
clec3ba tetn coding upstream 22136 42984409 ~ 42986551 (-)
LOC110490077 LOC106605036 coding upstream 36552 42998825 ~ 43019825 (-)
LOC110490115 LOC106605031 coding upstream 84140 43046413 ~ 43056269 (-)
LOC110490105 LOC106605024 coding upstream 94679 43056952 ~ 43088889 (-)
LOC110490133 lyplal1 coding upstream 163425 43125698 ~ 43131145 (-)
G145097 NA non-coding downstream 154724 42767717 ~ 42767944 (-)
G145028 NA non-coding downstream 189587 42732800 ~ 42733081 (-)
G145027 NA non-coding downstream 189936 42732494 ~ 42732732 (-)
G145026 NA non-coding downstream 190210 42732136 ~ 42732458 (-)
G145025 NA non-coding downstream 190954 42731368 ~ 42731714 (-)
G145603 NA non-coding upstream 80574 43042847 ~ 43076675 (-)
G145609 NA non-coding upstream 84066 43046339 ~ 43058386 (-)
G145604 NA non-coding upstream 134675 43096948 ~ 43097815 (-)
G145669 NA non-coding upstream 138208 43100481 ~ 43100709 (-)
G145678 NA non-coding upstream 157102 43119375 ~ 43119711 (-)
G145010 NA other downstream 215389 42706818 ~ 42707279 (-)
LOC110489860 LOC106605053 other downstream 1192246 41714269 ~ 41730507 (-)
G142918 NA other downstream 2058947 40863214 ~ 40863721 (-)
LOC110489653 LOC106605072 other downstream 2681264 40224622 ~ 40298333 (-)
G141363 LOC106605077 other downstream 3157195 39763933 ~ 39765473 (-)
G145767 NA other upstream 308444 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 410567 43372725 ~ 43392160 (-)
LOC110490298 LOC106605170 other upstream 813790 43776063 ~ 43783884 (-)
LOC110490352 NA other upstream 1472517 44434790 ~ 44464449 (-)
LOC110490449 scmh1 other upstream 1609675 44571948 ~ 44606865 (-)

Expression


Co-expression Network