LOC110490115 (LOC106605031)


Basic Information

Item Value
gene id LOC110490115
gene name LOC106605031
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43046413 ~ 43056269 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021563298.2
GGCACCACCTATGGACTACCCGGACACAAGGGAGTGTCGGAATTTCCGGTGACGTCACCGCGTCTCAATATCCATAATGGGTCTGCAGCTGTCTGGAGAGCAACAATAACAAGAGAAGCTCAGCGATAAAACGAGTTATTGTCTCGTCTCTGACACCTTTGCTAGCCCCAACTTTACATCATTCTGTCACCAACACCCTCGGAGAATTAACTCTGGCCTCCGCTTCCTCCGACTCAGAAACCGTCGGAGCGTCGCCGCCACTGCGAAAGAAATACCGAGCTTCGGTGGCGGAGGGAGCAGGGGGGCTTGGGGCTGCAATTGGGTCAGCGGCCCTGTCTACAGTTGTGGGGATTTGAACTTTTCCCAATTCACCCGTTGCTCCTATCATTCGATTCAAGCCTCACAGTGTAGCCCACATCAACATTAATAACATGCAGGCCAACGGGGCAGGGCAGGGTCAAGATTCGGAGCTGTCCTGCCTAAACAACAGTGCGCAAAACGGAGAGTCGTCCTCCGCCGGGGAAGCTCACACTAACGTTAATGGACTATCCACAACAAACAATGGGAACTCTGTCAGTAACAACGACGGTATCCCAGCCCCAGCAGCATCCAACAACACCGTGTCTTCGGATGCAAACTCCGTGAAAAAGAAGAAACGTCTTTCTCAGTCAGAGGAAGATGTCATTAGACTTATAGGGCAACATTTACACGATTTAGGACTTAATCAGACAGTGGACCTGttgatgcaggagtctggctgcAGACTGGAGCATCCCTCTGCCACGAAGTTCCGCAACCATGTGGTGGAAGGAGAGTGGGACAAGGCTGAAAGTGACCTGAATGAGCTAAAAGCATTGATGCATTCTCCAAGTGCTATTGTGCGGATGAAGTTCCTGCTTCTGCAGCAGAAGTACCTGGAGTGTCTGGAGGATGCCAAGGTCCTGGAGGCGCTGCAGGTCCTGAGAGCTGAGCTCACTCCCCTCAAGTACAACACAGAGCGTATCCACATCCTGAGCGGGTACCTGATGTGCAGCCATGCAGAGGACCTGAGAGCAAAGGCAGAGTGGGAGGGCAAAGGCACTGCCTCCCGCACTAAACTCCTTGACAAGTTACAGACGTACCTGCCTCCCTCTGTGATGCTGCCTCCGCGCCGGCTGCAGACCCTGCTGAGGCAGGCTGTGGAGCTGCAGAGAGAGCGTTGCCTCTACCACAACACCAAACTGGACAGTGGCCTGGACTCTGTGTCCCTCCTCCTGGACCACGCCTGCAGCCGGAAACAGTTCCCTTGCTACACCCAGCAGATCCTCACCGAACACTGCAATGAAGTGTGGTTCTGTAAGTTCTCCAATGACGGCACCAAACTGGCCACGGGATCCAAAGACACCACAGTCATCGTGTGGCATGTCAACACAGAGAGTCACCAGTTGAAGCTGATGAAGACTCTAGAGGGCCACGCCTACGGTGTCTCATACCTGGCCTGGAGCCCTGATGACACTTACTTGATTGCCTGTGGCCCCGATGACTGCTCAGAGCTGTGGCTGTGGAACGTACAGACGGGTGAGTTGCGGACAAAAATGAGCCAATCACACGAGGACAGTCTGACCAGTGTGGCTTGGAATCCAGACGGCAAACGCTTCGTCACCGGAGGCCAGAGGGGCCAATTCTACCAGTGTGATCTGGATGGTAACCTGCTGGACTCGTGGGAAGGAGTAAGGGTTCAATGCCTGTGGTGCCTGGGTGACACTCGGACCGTCCTAGCATCAGACACACACCAGCGTATCCGTGGTTACAACTTTGAGGACCTTACGGACAGAAACATAGTCCAGGAGGACCATCCAATCATGTCTTTCACAGTTTCAAAGAACGGGAGGTTAGCTCTGCTGAATGTGGCTACTCAGGGTGTGCACCTGTGGGACCTACATGACCGGGTGCTGGTGAGGAAgtatcagggtgtgacacagggCTTCTACACCATCCACTCCTGCTTTGGAGGACACAACGAAGACTTCATCGCCAGTGGGAGTGAGGATCACAAAGTGTACATCTGGCACAGGCGCAGTGAGCTGCCCATCGCAGAGTTGACAGGTCATTCACGTACAGTGAACTGTGTGAGCTGGAATCCTGTAGTGCCCGGTCTCCTGGCCAGCGCCTCAGACGACGGCACTGTCCGAATCTGGGGCCCCGCCCCTTTCCTTGATGTCCAGGACGCTGAGGGGCTAAACGAATGTTGTAGCATGGACAGCTGATGGTGACCCTGGAGCAGAAGACACTACTTCTCGAATCCAGGAGAAAAACACTAAACTCTAACGAATGAAGCAGAGAAACTATTGCGTTTTGACAGCTGCTTTCTGAAGGTTTTGCTCTGGGGCTGTGCTCCAGTGGCAGGTGATAGCGTCACACACACGGAGATGTCAGACAAATCACTTAAATTAACTGATTACCAAGCAGGCACCTTGACTGACCTCCCACCTCTTCTTACCTGTGTGGCTCACAGTGTCTGATGTCTGTTGCACCTCCTGTGTTCAGCCAGGCCCCATCCTCTTTCGTCTTGGAGCTAACCCCAGGTCTGCCACCTTTCACCTGCCTCGTCGAgagtttattatttattattgatAGTATTATTTATTGTCATGATTAGTACgttgatatatagagagagggctGTAGTGGTGGAGAGTGGTATGGgtatatacagtgctgtgaacAAGTATTTGCCCCTTTTTAattctctacttttgcatatttttgatactaaatgttatcagatcttcaaccaaaaccgaatattagataaagggaacctgagtgaacaaataccacaacaattacatacttatttcataaacaaagttatgcaacacccaattcccctgtgtgaaaaaatAATTGCACCCTTACAGTCAGTAACTGGTTGTGCCATCTTTAGCTACAATGACTCGAACCAAactcttcctgtagttgttgatcagtctctcatgtCGCTGTGGAgaaattttggcccactcttccatgcagaactgctttaactcagcgacattgTAGGTTTTCCAGCATGAACTGCatgtttcaagtcctgccacaacatctcaattgggattaggtctggactttgactaggccattccaaaacttcaaatttgttgctttttagccatttt

Function

NR:

description
WD repeat-containing protein 26-like

GO: NA

KEGG:

id description
K22382 WDR26; WD repeat-containing protein 26

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021563298.2 True 3158 mRNA 0.51 14 43046413 43056269

Neighbor

gene id symbol gene type direction distance location
LOC110490077 LOC106605036 coding downstream 26588 42998825 ~ 43019825 (-)
clec3ba tetn coding downstream 59862 42984409 ~ 42986551 (-)
LOC110501576 LOC106605029 coding downstream 84140 42922668 ~ 42962273 (-)
LOC110490051 LOC106581764 coding downstream 253638 42779410 ~ 42792775 (-)
LOC110490045 LOC106605033 coding downstream 318864 42724078 ~ 42727549 (-)
LOC110490105 LOC106605024 coding upstream 683 43056952 ~ 43088889 (-)
LOC110490133 lyplal1 coding upstream 69429 43125698 ~ 43131145 (-)
LOC110490140 LOC106605021 coding upstream 141319 43197588 ~ 43225313 (-)
rrp15 LOC106605018 coding upstream 171673 43227942 ~ 43236818 (-)
LOC110490160 LOC106605017 coding upstream 204897 43261166 ~ 43264245 (-)
G145584 NA non-coding downstream 97266 42948886 ~ 42949147 (-)
G145580 NA non-coding downstream 101094 42945063 ~ 42945319 (-)
G145553 NA non-coding downstream 102818 42896465 ~ 42943595 (-)
G145573 NA non-coding downstream 112093 42932912 ~ 42934320 (-)
G145097 NA non-coding downstream 278469 42767717 ~ 42767944 (-)
G145604 NA non-coding upstream 40679 43096948 ~ 43097815 (-)
G145669 NA non-coding upstream 44212 43100481 ~ 43100709 (-)
G145678 NA non-coding upstream 63106 43119375 ~ 43119711 (-)
G145682 NA non-coding upstream 68042 43124311 ~ 43124646 (-)
G145010 NA other downstream 339134 42706818 ~ 42707279 (-)
LOC110489860 LOC106605053 other downstream 1315991 41714269 ~ 41730507 (-)
G142918 NA other downstream 2182692 40863214 ~ 40863721 (-)
LOC110489653 LOC106605072 other downstream 2805009 40224622 ~ 40298333 (-)
G141363 LOC106605077 other downstream 3280940 39763933 ~ 39765473 (-)
G145767 NA other upstream 214448 43270717 ~ 43272516 (-)
LOC110490183 LOC106605015 other upstream 316571 43372725 ~ 43392160 (-)
LOC110490298 LOC106605170 other upstream 719794 43776063 ~ 43783884 (-)
LOC110490352 NA other upstream 1378521 44434790 ~ 44464449 (-)
LOC110490449 scmh1 other upstream 1515679 44571948 ~ 44606865 (-)

Expression


Co-expression Network