LOC110501584


Basic Information

Item Value
gene id LOC110501584
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 43551582 ~ 43558937 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC110501584
ACTCAGCTGACTGCAGTACACCTTGTGGACTCTCATTACTGCGTTGACCCAGCTACGTTCATCTAGGTCTTGTGCACCTGTCCACCATGCTACACGTGGAGCTACCCCACGTCAACATCCTCTCCAAGATGGACCTCATCGAGCAGTACAGCAAACTGGCTTTCAACCTGGACTTCTACACAGATGTTATGGACCTGACATATCTGCTGGATCACTTGGCTGCGGACCCTTTCTTTAGGAAGTTCTTCAAACTAAatgagaaattcgcaggggtcatTTGTCATACAAGACTACGGCCTTGTCTCTTTTGTGCCTCTCAATGTGCAGGACAGGGAGAGTATGACGCAGGTCCTGTGGACAGTGGACAAAGCCAACGGCTGCTGCTTCGGAGACCTGGAGGAGAGGAATCTGGCATGCAATGATGTCAGCCACTGTGGCAGCAGACTTTCAGTTCACCTTAACTCTAGGAGTGCAAGAGAGGTATGTTGGAGATGGTGAAAAGACTGGAGGAGGTGGTGATGGATCTGTAAATCACCAGACACCAATCAATGGATGCTGCTGACCTCCATGTTGCTTGCACTGTGCCAGCAAAGGACTGACAGTACATTTGTCCAGTGGAAGTGGTGTGTCAAACGCAGCAAATGCTATTCTTCTTTTCCTCTTTTCCTGAACACGTAAATGTTCACTCTTTTAGCTTGATATGGCTGGTTCTGGTTATATAGAGGAGAGAAAGGGTTAGAAGCATCAGACTGCAAACATAATCCAAACCAACTGCTTCTTACCCCACAATCCAAGAATTAGATCAGTCTGGGTTAAGAATTTGAATTGATATATCCTTGGCTTTGTGGCTGGGTtacagtgccgtgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC110501584 True 965 mRNA 0.46 4 43551582 43558937

Neighbor

gene id symbol gene type direction distance location
LOC110490176 NA coding upstream 197921 43351127 ~ 43353661 (+)
LOC110490166 LOC106605016 coding upstream 276298 43270666 ~ 43275284 (+)
LOC110490122 LOC106605034 coding upstream 453728 43091038 ~ 43097854 (+)
LOC100301866 LOC106584110 coding upstream 509103 43025400 ~ 43042479 (+)
LOC110490064 LOC106605040 coding upstream 573578 42975400 ~ 42978004 (+)
LOC110490199 NA coding downstream 11353 43570290 ~ 43596359 (+)
LOC110501593 pigv coding downstream 38377 43597314 ~ 43599427 (+)
LOC110490231 LOC106605011 coding downstream 71528 43630465 ~ 43651752 (+)
LOC110490316 LOC106584327 coding downstream 388151 43947088 ~ 43950347 (+)
LOC110490326 LOC106605007 coding downstream 396112 43955049 ~ 43960992 (+)
G145513 NA non-coding upstream 120647 43430711 ~ 43430935 (+)
G145508 NA non-coding upstream 125941 43425437 ~ 43425641 (+)
G145493 NA non-coding upstream 148637 43402459 ~ 43402945 (+)
G145420 NA non-coding upstream 191698 43310168 ~ 43359884 (+)
G145415 NA non-coding upstream 302296 43249037 ~ 43249286 (+)
G146039 NA non-coding downstream 147832 43706769 ~ 43715909 (+)
G146042 LOC106605010 non-coding downstream 160419 43719356 ~ 43719858 (+)
G146050 NA non-coding downstream 163926 43722863 ~ 43723100 (+)
G146043 NA non-coding downstream 164901 43723838 ~ 43724222 (+)
G146053 NA non-coding downstream 170584 43729521 ~ 43729792 (+)
G144661 NA other upstream 985552 42510330 ~ 42566030 (+)
G143938 LOC106605049 other upstream 1582265 41968374 ~ 41969317 (+)
LOC110489834 eny2 other upstream 2009991 41539240 ~ 41541654 (+)
G139179 NA other upstream 5499838 38051359 ~ 38051744 (+)
G139101 NA other upstream 5607570 37943742 ~ 37944012 (+)
G146054 LOC100136012 other downstream 171935 43730872 ~ 43731218 (+)
G146091 NA other downstream 209770 43768707 ~ 43769162 (+)
G146114 NA other downstream 240467 43799404 ~ 43799853 (+)
G146165 NA other downstream 327659 43886596 ~ 43889609 (+)
G146226 NA other downstream 437843 43996780 ~ 43997065 (+)

Expression


Co-expression Network