si:dkeyp-19e1.3 (LOC106560684)


Basic Information

Item Value
gene id si:dkeyp-19e1.3
gene name LOC106560684
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 47033009 ~ 47130517 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036949765.1
AGGAACAGCGACAAGATGGTGAAGCGTGTGTACAAGGGAATCCCCCTCCAGTTGAGAGGCCAGGCCTGGGCTCTGCTACTGGACATAGAGAAGGTGAAGCAGGAGAACTCTGGAAAGTATGAGGCAGCAGGCCCTGTTCCATGTGCTAGCGGCCTACTCCGTATACAAtacgGAGGTGAGCTACTGCCAGGGGATGAGTCAGATCGCCGCCATCCTGCTCATGTACCTGAACGAGGAGGACGCCTTCTGGGCCTTGTCCCAGCTCCTCACAAACAACAACCACACCATGCATGGATTCTTCATCCCTGGGTTCCCCAAGCTGCAGCGCTACCAGGCCCACCACGAGCAGATCCTGTCCAAGCTCCTCCCCAAGCTAAAGAAACACCTGGACAGAGAGCAGATGTCCAACGGAATATACACCACTAAATGGTTCCTGCAGTGCTTCATAGATAGGACCCCGTTCACCCTGACCCTGCGCTTGTGGGACATCTACAtcctagagggagagaggatactCACAGCCATGGCCTACACCACCCTCAAAATACACAAGAAGCGCTTGCTGAAGCTTCCTCTGGAGGACCTGAGGGAGTTCCTCCAGGAGCACCTGTCCAGCTCATTCTTCCTACCCGACGACGTGGTGGTGGAGCAGCTGCAGGCGTCCATGGCCGAGCTCCGTAAGATGAAGCTGGACCTCCCACCGTCAGCCAAGTCAGAGGAGCTGCCTAAGAAGCACCTCGGTGAGGAGCGGCCTGTTCTCCTGATGCCCTTCCAGCGTGATCTAGCCCTCCCTCTGGACCAGCCCAAGACCAGTCTCCAGCCCCCGCTCCAGCTCCAGCCCCACATAGAGGCCCACAGGCCGGACACCATCACCCTTGACCGCTCCTTCTGTCCCGGAGACACCCAGGACACTAGCAGCATCCCTGGGGCCCACGACCCCCTGCGCCCCATGCCCTCTCAGGAACCGGTGGTAGTCCACAATCAGGCTCTGATGCCAGAAGGGCCTAAAATGTGTCCAGTCACCCCACCCAAGCCTCCGCCGAAGCCACATAAGGTTGGTTCCACTCCAGGGGTGCGGGGTGTCAGGGATAGGGTGGAGGAGTGTCCGAGTGACCATGTCTCAGAGgtggagaaagaaggagaaaggaGTCTGTCTGAGGTTAGGGGTGGTAGAGTGGGGATGGAGGCCCGATCTGCAGGTCCAGAGACCCAGGAAGAGCCCGGTTACTGGCCTCCGCCCTACGAGCCCCCTGTTGGGGATGTTTCCATCACACAGTCTGGATCAGGGTCTAAGACACTGGAGTTCCCAGATCTACCCCCTCCACCCTTTTACTCTATGGAAGAGAGCGCCCACACACCCCTGGGCCCCGAACCTCTATGCTTGCGAGACGGGACCAAGGTAGGGCTGAAGTCGGACTCTGTGCCCCCCTGCTCGGCTCTTTCACTAGGGGTAGAACCCCTACCGAAGCCTAAGagtccgcgtccacctccaccCACGTCCCTGGACCTCATCCTGGAGGAATCCCCGTCCTCGCGGCCCTCTTTTTCCCTCGCCTTTGCCAAGCCGTCCCCCCGAATCACCTTCAAGCCCACTATGTTCCCCGTGTCACTCTGCGTGCCCCAGACGGCAGGGGACCGCCGGCCCTCAAACACCTCCCAGTACGACAACCTCTCGGAGGCTGACGGCGAGGACTGCTTCATGGACCGGCTGCTGGAGGTGGCCACTGCCCTGCCGCAGAGCCCCTTGCCAGGCACCAGCCCTCAGGAAACACTGGGGATGTTCGGCCTACCACCACCGCCGCGCATACCTGAGCTAGATGATgacccctcatcctcctctcttttccatcCCCTACCGCCGCCTCCTCCGGTGTTCTTCCTTTCCCTGCCCGacacctcctctcccacccttctctctgcctctccctccccctctcctcttcctaccACCTTCTCagcccttccctctcttccacaGGAGCCGGACTATGAAGGACAGGAGGAGAGCTGGGTGGTAGATTCCATCGTCATCCCTCCGCCGCCGCCCTGCTTCGCCGATAGACTGGCTCCTTTCCAGTGTAGCCCTCCTCCTAACCACCACACTGGGCTCCACAGCCTAACGGACACACACAGAGCCACCACTGCCAACCAGAGCCAAAGCTCAAACCagaaccaggtctcctcccagtTACAAAAACTGCCCACGGCCCACAGGCCCCTCCCTGCCCTGCCTGCCTTCACGGCCCAGATGCTGCTTCCAGGGCCCTCATCTGGACAGTCGGCAGGAGAGGTCACCTCAGTGCGATCCAACCCAGACTTTTATAGAATGCATGCTGGAAGCCACCAGCTGTCCAAATCGGTCACCTTTTAGGGTTTCTATAGTTTGAAAGCGTTTGAAAGGTAAAGAATTTGAGACACGTGACTGTGTGGGAACGAGACAATGGACTGAAGAGACTGCTGCAATTACCTACTGTGCTCATCTAACATACAAAGCCATtttgtaggagggagagggaaaagccCTTAGTGTGGTCAGTTGCTGTTTTTGGAGGGAGCAAATCACTTTTTCATAGTTATGTATAGATATTTTGTGGTATTTGCACCTTTTTATTAAGGGCAACAAGTAGTTTTCTAAATGTTCACCTAAATTTGAAACCGTAGTCTTGCCTCACATTTTGGAGGTAGTTTtaaggtgtgtgtgcatgcatgtgtctgGCAATATGACCAGTTGGTATTTTCATCATGTAGGAATCTGTTTATTTCGGTTCCTTTTTCCTGTAACAGCAGTGTCTTAAGCATTGAGCAGTTTAACATCCAATGAAAACAGGAATTTCTGTTCAAGAACTTATCTCAAAGGGCTTTCCAAGTTGGCATACAGTCATTGTGAAGCACCAAAGGCCTATATCCCATACCAGTACTTAATTTATTTGAGCAGGCTCACAGAACTCAATAAAATATAGTTAGACCATA
>XM_021564121.2
GCATTTTGTGAATACCATTAACCATGTACTATTTTATCCACCTCAGTAATTATGATACCGTTGGAAGTAACCTGGATGACAACACCTTTCACATATTTTATCTTTCCTAAAACACCTTGTCGTGTGCGCGCTTCCTGCCGCTGCTGCGCGTGGTCCATTCTGTCACTGCTGGCACCCAGACAGCTGCAAGCTCGTGGCAATGCATCTTTcgaacgagagggagggagaacagcaGCAGTCGTCTGGGCACTCAACAAACTATCGCAGTTGTCTGGGTGACAGCTACCTCGGCTCGACAGTTTATGAGCGAGTAAAGAATGAGAAGAGAGGATTCTCTTACCGACTGGACAGCGCAGGAGACTCACCCTAAAAAAACTTTGACATGAAGAAGGATATTGAGACGCTGATAGCAGAGGAACGGGCTGACATCATCTCCAAGTATGACAAGGGCAGGCAGGAGGGTGTCCACATCGACCCCTGGGAGGATACTGACTACAGCATCTATAAGGTCACAGACCGCCACGGCTTCCTGCACGAAGAGGAGCTGCCCACTCCGAGTGCAATTGAAGAGAAGCAAAAGCATCACGAGATAGAGCGGGTGGAGAAATGGCTGAAGATGGTCAAGAAGTGGGACAAGTACAGGAACAGCGACAAGATGGTGAAGCGTGTGTACAAGGGAATCCCCCTCCAGTTGAGAGGCCAGGCCTGGGCTCTGCTACTGGACATAGAGAAGGTGAAGCAGGAGAACTCTGGAAAGTATGAGACTATGAAGGAGCAGGCCAGGAGTTTCTCTACAGAGATCAAACAGATTGATCTGGATGTCAACAGAACCTTCCGGAACAACATCATGTTCATGGAACGCTTTGGAGTCAAGCAGCAGGCCCTGTTCCATGTGCTAGCGGCCTACTCCGTATACAAtacgGAGGTGAGCTACTGCCAGGGGATGAGTCAGATCGCCGCCATCCTGCTCATGTACCTGAACGAGGAGGACGCCTTCTGGGCCTTGTCCCAGCTCCTCACAAACAACAACCACACCATGCATGGATTCTTCATCCCTGGGTTCCCCAAGCTGCAGCGCTACCAGGCCCACCACGAGCAGATCCTGTCCAAGCTCCTCCCCAAGCTAAAGAAACACCTGGACAGAGAGCAGATGTCCAACGGAATATACACCACTAAATGGTTCCTGCAGTGCTTCATAGATAGGACCCCGTTCACCCTGACCCTGCGCTTGTGGGACATCTACAtcctagagggagagaggatactCACAGCCATGGCCTACACCACCCTCAAAATACACAAGAAGCGCTTGCTGAAGCTTCCTCTGGAGGACCTGAGGGAGTTCCTCCAGGAGCACCTGTCCAGCTCATTCTTCCTACCCGACGACGTGGTGGTGGAGCAGCTGCAGGCGTCCATGGCCGAGCTCCGTAAGATGAAGCTGGACCTCCCACCGTCAGCCAAGTCAGAGGAGCTGCCTAAGAAGCACCTCGGTGAGGAGCGGCCTGTTCTCCTGATGCCCTTCCAGCGTGATCTAGCCCTCCCTCTGGACCAGCCCAAGACCAGTCTCCAGCCCCCGCTCCAGCTCCAGCCCCACATAGAGGCCCACAGGCCGGACACCATCACCCTTGACCGCTCCTTCTGTCCCGGAGACACCCAGGACACTAGCAGCATCCCTGGGGCCCACGACCCCCTGCGCCCCATGCCCTCTCAGGAACCGGTGGTAGTCCACAATCAGGCTCTGATGCCAGAAGGGCCTAAAATGTGTCCAGTCACCCCACCCAAGCCTCCGCCGAAGCCACATAAGGTTGGTTCCACTCCAGGGGTGCGGGGTGTCAGGGATAGGGTGGAGGAGTGTCCGAGTGACCATGTCTCAGAGgtggagaaagaaggagaaaggaGTCTGTCTGAGGTTAGGGGTGGTAGAGTGGGGATGGAGGCCCGATCTGCAGGTCCAGAGACCCAGGAAGAGCCCGGTTACTGGCCTCCGCCCTACGAGCCCCCTGTTGGGGATGTTTCCATCACACAGTCTGGATCAGGGTCTAAGACACTGGAGTTCCCAGATCTACCCCCTCCACCCTTTTACTCTATGGAAGAGAGCGCCCACACACCCCTGGGCCCCGAACCTCTATGCTTGCGAGACGGGACCAAGGTAGGGCTGAAGTCGGACTCTGTGCCCCCCTGCTCGGCTCTTTCACTAGGGGTAGAACCCCTACCGAAGCCTAAGagtccgcgtccacctccaccCACGTCCCTGGACCTCATCCTGGAGGAATCCCCGTCCTCGCGGCCCTCTTTTTCCCTCGCCTTTGCCAAGCCGTCCCCCCGAATCACCTTCAAGCCCACTATGTTCCCCGTGTCACTCTGCGTGCCCCAGACGGCAGGGGACCGCCGGCCCTCAAACACCTCCCAGTACGACAACCTCTCGGAGGCTGACGGCGAGGACTGCTTCATGGACCGGCTGCTGGAGGTGGCCACTGCCCTGCCGCAGAGCCCCTTGCCAGGCACCAGCCCTCAGGAAACACTGGGGATGTTCGGCCTACCACCACCGCCGCGCATACCTGAGCTAGATGATgacccctcatcctcctctcttttccatcCCCTACCGCCGCCTCCTCCGGTGTTCTTCCTTTCCCTGCCCGacacctcctctcccacccttctctctgcctctccctccccctctcctcttcctaccACCTTCTCagcccttccctctcttccacaGGAGCCGGACTATGAAGGACAGGAGGAGAGCTGGGTGGTAGATTCCATCGTCATCCCTCCGCCGCCGCCCTGCTTCGCCGATAGACTGGCTCCTTTCCAGTGTAGCCCTCCTCCTAACCACCACACTGGGCTCCACAGCCTAACGGACACACACAGAGCCACCACTGCCAACCAGAGCCAAAGCTCAAACCagaaccaggtctcctcccagtTACAAAAACTGCCCACGGCCCACAGGCCCCTCCCTGCCCTGCCTGCCTTCACGGCCCAGATGCTGCTTCCAGGGCCCTCATCTGGACAGTCGGCAGGAGAGGTCACCTCAGTGCGATCCAACCCAGACTTTTATAGAATGCATGCTGGAAGCCACCAGCTGTCCAAATCGGTCACCTTTTAGGGTTTCTATAGTTTGAAAGCGTTTGAAAGGTAAAGAATTTGAGACACGTGACTGTGTGGGAACGAGACAATGGACTGAAGAGACTGCTGCAATTACCTACTGTGCTCATCTAACATACAAAGCCATtttgtaggagggagagggaaaagccCTTAGTGTGGTCAGTTGCTGTTTTTGGAGGGAGCAAATCACTTTTTCATAGTTATGTATAGATATTTTGTGGTATTTGCACCTTTTTATTAAGGGCAACAAGTAGTTTTCTAAATGTTCACCTAAATTTGAAACCGTAGTCTTGCCTCACATTTTGGAGGTAGTTTtaaggtgtgtgtgcatgcatgtgtctgGCAATATGACCAGTTGGTATTTTCATCATGTAGGAATCTGTTTATTTCGGTTCCTTTTTCCTGTAACAGCAGTGTCTTAAGCATTGAGCAGTTTAACATCCAATGAAAACAGGAATTTCTGTTCAAGAACTTATCTCAAAGGGCTTTCCAAGTTGGCATACAGTCATTGTGAAGCACCAAAGGCCTATATCCCATACCAGTACTTAATTTATTTGAGCAGGCTCACAGAACTCAATAAAATATAGTTAGACCATA

Function

NR:

description
formin-like protein 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036949765.1 False 2970 mRNA 0.56 9 47033009 47066156
XM_021564121.2 True 3720 mRNA 0.54 14 47033009 47130517

Neighbor

gene id symbol gene type direction distance location
tmem86a tmem86a coding downstream 111401 46844180 ~ 46921608 (-)
b4galnt4a b4galnt4 coding downstream 277006 46318557 ~ 46756003 (-)
LOC118940396 LOC106604981 coding downstream 440286 46589886 ~ 46592723 (-)
abtb2b abtb2 coding downstream 743666 46139256 ~ 46289343 (-)
ldha ldha coding downstream 1541091 45469242 ~ 45491918 (-)
si:ch211-236l14.4 LOC106560706 coding upstream 96849 47227366 ~ 47311705 (-)
mrpl23 LOC105008177 coding upstream 734295 47864812 ~ 47998457 (-)
phlda2 phla2 coding upstream 1144557 48275074 ~ 48277572 (-)
nap1l4a LOC106560703 coding upstream 1188703 48319220 ~ 48384812 (-)
commd9 commd9 coding upstream 1318626 48449143 ~ 48457258 (-)
G150586 spty2d1 non-coding downstream 63933 46967505 ~ 46969076 (-)
G150609 NA non-coding downstream 82503 46950272 ~ 46950506 (-)
G150596 NA non-coding downstream 101660 46930978 ~ 46931349 (-)
G150261 NA non-coding downstream 166628 46860847 ~ 46866381 (-)
G150681 NA non-coding upstream 46220 47176737 ~ 47177819 (-)
G150675 LOC100653436 non-coding upstream 64376 47194893 ~ 47205433 (-)
G150758 NA non-coding upstream 75629 47206146 ~ 47206386 (-)
G150759 NA non-coding upstream 76243 47206760 ~ 47206959 (-)
G150618 NA other downstream 39344 46964734 ~ 46993665 (-)
G150290 NA other downstream 183393 46846152 ~ 46849616 (-)
LOC110490531 LOC106560723 other downstream 1864910 45134476 ~ 45168260 (-)
G147800 NA other downstream 2169450 44863085 ~ 44863559 (-)
G151474 NA other upstream 720268 47850785 ~ 47851348 (-)
G151875 NA other upstream 1057441 48187958 ~ 48188278 (-)
G151920 NA other upstream 1095782 48226299 ~ 48226944 (-)
G152024 NA other upstream 1172794 48303311 ~ 48303663 (-)

Expression


Co-expression Network