Gene
RNA
| Item | Value |
|---|---|
| gene id | mrpl23 |
| gene name | LOC105008177 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 47864812 ~ 47998457 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| 39S ribosomal protein L23, mitochondrial |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0005739 | mitochondrion | cellular_component |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02892 | RP-L23, MRPL23, rplW; large subunit ribosomal protein L23 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021564139.2 | True | 1256 | mRNA | 0.45 | 5 | 47864812 | 47998457 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:ch211-236l14.4 | LOC106560706 | coding | downstream | 553107 | 47227366 ~ 47311705 (-) |
| si:dkeyp-19e1.3 | LOC106560684 | coding | downstream | 734295 | 47033009 ~ 47130517 (-) |
| tmem86a | tmem86a | coding | downstream | 943204 | 46844180 ~ 46921608 (-) |
| b4galnt4a | b4galnt4 | coding | downstream | 1108809 | 46318557 ~ 46756003 (-) |
| LOC118940396 | LOC106604981 | coding | downstream | 1272089 | 46589886 ~ 46592723 (-) |
| phlda2 | phla2 | coding | upstream | 276617 | 48275074 ~ 48277572 (-) |
| nap1l4a | LOC106560703 | coding | upstream | 320763 | 48319220 ~ 48384812 (-) |
| commd9 | commd9 | coding | upstream | 450686 | 48449143 ~ 48457258 (-) |
| th | th | coding | upstream | 539373 | 48537830 ~ 48560832 (-) |
| ptdss2 | ptdss2 | coding | upstream | 662994 | 48661451 ~ 48697994 (-) |
| G151475 | NA | non-coding | downstream | 9251 | 47855103 ~ 47855561 (-) |
| G151466 | NA | non-coding | downstream | 19627 | 47844821 ~ 47845185 (-) |
| G151465 | NA | non-coding | downstream | 20993 | 47843473 ~ 47843819 (-) |
| G151458 | NA | non-coding | downstream | 23712 | 47840898 ~ 47841100 (-) |
| G151456 | NA | non-coding | downstream | 25385 | 47839196 ~ 47839427 (-) |
| G151816 | NA | non-coding | upstream | 130017 | 48128474 ~ 48128710 (-) |
| G151815 | NA | non-coding | upstream | 130415 | 48128872 ~ 48129488 (-) |
| G151814 | NA | non-coding | upstream | 133076 | 48131533 ~ 48133957 (-) |
| G151842 | NA | non-coding | upstream | 136322 | 48134779 ~ 48135018 (-) |
| G151854 | NA | non-coding | upstream | 149504 | 48147961 ~ 48148246 (-) |
| G151474 | NA | other | downstream | 13464 | 47850785 ~ 47851348 (-) |
| G150675 | LOC100653436 | other | downstream | 659379 | 47194893 ~ 47205433 (-) |
| G150618 | NA | other | downstream | 871147 | 46964734 ~ 46993665 (-) |
| G150290 | NA | other | downstream | 1015196 | 46846152 ~ 46849616 (-) |
| G151875 | NA | other | upstream | 189501 | 48187958 ~ 48188278 (-) |
| G151920 | NA | other | upstream | 227842 | 48226299 ~ 48226944 (-) |
| G152024 | NA | other | upstream | 304854 | 48303311 ~ 48303663 (-) |
| G154300 | NA | other | upstream | 2102973 | 50101430 ~ 50107447 (-) |
| G154338 | NA | other | upstream | 2158229 | 50156686 ~ 50157825 (-) |
