phlda2 (phla2)


Basic Information

Item Value
gene id phlda2
gene name phla2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 48275074 ~ 48277572 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564155.2
CACTCTCTGTTCATTCATAACGCAACTCTGGATTATCAAGCCTCCGCTGAGAAGCTCCTTCTCCGAGGACTTCGGAAGAAACAACTGAGGAATCTACCACCTCTGCCAGCGTCTGCTTCTCTCAAACAATTATAAACACAACCAGAATTGTATCACTGATACTAAAACCATGAAAATGTCAGCAGAGCAGATTTCCGAGGTCCTGAAAGAGGGAGAGCTGGAGAAGAGGAGTGACAACCTCCTTCAGTTCTGGAAAAGGAAGACATGTGTCCTGACCACGGATAGCCTCAACATCTACGCCGACACGCAGAAGCGTACCAAGAGCAAGGAGCTCAAACTCCAGTCTATCAAGAAAGTGGACTGTGTTGAGCGCACCGGCAAGTTTGTCTACTTCACTATTGTTACCACGGACAATAAGGAGATAGATTTCCGGTGCTCCGGTGAAGATAACTGCTGGAATGCAGTGATCACCATGGCACTGATTGACTTCCAGAACAGAAAGGCTATTCAGGACTTTAAAACGCGACAGGACGACGAGAGCGGGTCCCCGGGACTGCACGAGAGCCGCATGGCCAGAGCTCCCTGAATGGCTTTGGGAGATTAGCTACCACACTCCGAATATGAGTCAGTTATGGACCATGAAGAACAGGAACTTGGACCAAAGAAAGACGTCACCCGGTCCGTGGATGAAGGATTGTTCGGGACAGATCAGCGCATTCCCTTAGGGACCTCTGTCCTGATAAGCTTCTAAAAGAGAATTTAAAATGCTCAAAACTCAAGACTGAATCCTTGAACTTTCAAGTATTTCAACGTGCGCTTTTCTGAGGAGGGATGCCTCCTGAATGACATTGCAAAAATGTGTTAATTTATTTGTGTCAAGAAAATGTTTTTCTTAGACACATGCTTATGTTGTTTAAATTATTTACTATTTCAGTGTGTATTTATTTGAATAAATATTCATACATTTTTGAAGAAAATGTGGTCCTATagcccagtggttcccaaccggTGTTCAGCAGGAACTCTCAGGTGTGTCGCAAACTTTTCCTGatcttgattttttttatttttacactcACTTATCAACGTAACCTGTTGAATGCACATGGCATTTTGACTTGGGAGCGCTTGTACTGCTCAGATAATACATTAAATAGTACATGGATACATCCGTATCATTGTTTCAAGTCCAGTGTGCTCAGGCTGTTGGTACATTTGTATCATTTGAGGAGCGCACATCACAAGCAAAGTCATTTGTTTGATTTGACTTTGTCTGTGAAAAGGGGTAAACACAAATGAACTATCTTGCTATCTTTCTATGGCAGAGAGGGAGTGGTATGGCTAAGCCCAGAGCCATAAAAAATACATGGCTCTGGCTAAGCCTAATCAGACTTTtcacaagcatttttctacacccgcaaaaacatctgttaaacatgtgtatgcgaccaataacatttgattaactATCAAATAATCCTAATTCATCTATAAAACCACTTATCACAGAAAATGTATGATTTTTCAATTTGGAaaagatgagatagggacatttTAGGTGCACAGctgaattttattttatttaactaggcatgtcagttaagggaaaattcttatttacaatgacggcctaccccagccaaacccagacggcactgggccaattgtgtgccaccctatgggactcccaatcacggccggatgtgatgcagcctggattccaaACCAGGTGCTGCAATGACgccttttgcactgagatgcagtgtcttaggccactcgGGAGCAATTTTCTATCCCATGAAGGTGTGCCAAGGttaaaaaaggttgggaaccactgcaatAGCCTATGTTTTTCTCTCATATATTGGTCAGTTAATGTTATGGATAAAATTTTGAGTGATGTTACATTGACAAAAATACAGATCTTCATATTAA

Function

NR:

description
pleckstrin homology-like domain family A member 2

GO:

id name namespace
GO:0016020 membrane cellular_component
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K23793 PHLDA; pleckstrin homology-like domain family A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564155.2 True 1935 mRNA 0.42 2 48275074 48277572

Neighbor

gene id symbol gene type direction distance location
mrpl23 LOC105008177 coding downstream 276617 47864812 ~ 47998457 (-)
si:ch211-236l14.4 LOC106560706 coding downstream 963369 47227366 ~ 47311705 (-)
si:dkeyp-19e1.3 LOC106560684 coding downstream 1144557 47033009 ~ 47130517 (-)
tmem86a tmem86a coding downstream 1353466 46844180 ~ 46921608 (-)
b4galnt4a b4galnt4 coding downstream 1519071 46318557 ~ 46756003 (-)
nap1l4a LOC106560703 coding upstream 41648 48319220 ~ 48384812 (-)
commd9 commd9 coding upstream 171571 48449143 ~ 48457258 (-)
th th coding upstream 260258 48537830 ~ 48560832 (-)
ptdss2 ptdss2 coding upstream 383879 48661451 ~ 48697994 (-)
LOC118940428 NA coding upstream 423877 48701449 ~ 48711230 (-)
G152002 NA non-coding downstream 2980 48271615 ~ 48272094 (-)
G151936 NA non-coding downstream 39120 48234024 ~ 48235954 (-)
G151922 NA non-coding downstream 47549 48227319 ~ 48227525 (-)
G151911 NA non-coding downstream 55080 48219703 ~ 48219994 (-)
G151909 NA non-coding downstream 56100 48218721 ~ 48218974 (-)
G152017 NA non-coding upstream 20774 48298346 ~ 48298589 (-)
G152026 NA non-coding upstream 27392 48304964 ~ 48305183 (-)
G152038 NA non-coding upstream 35724 48313296 ~ 48313529 (-)
G152328 NA non-coding upstream 127600 48405172 ~ 48455258 (-)
G152371 NA non-coding upstream 186251 48463823 ~ 48507440 (-)
G151920 NA other downstream 48130 48226299 ~ 48226944 (-)
G151875 NA other downstream 86796 48187958 ~ 48188278 (-)
G151474 NA other downstream 423726 47850785 ~ 47851348 (-)
G150675 LOC100653436 other downstream 1069641 47194893 ~ 47205433 (-)
G150618 NA other downstream 1281409 46964734 ~ 46993665 (-)
G152024 NA other upstream 25739 48303311 ~ 48303663 (-)
G154300 NA other upstream 1823858 50101430 ~ 50107447 (-)
G154338 NA other upstream 1879114 50156686 ~ 50157825 (-)
G155003 NA other upstream 2138171 50415743 ~ 50452147 (-)
G155072 NA other upstream 2302226 50579798 ~ 50581349 (-)

Expression


Co-expression Network