Gene
RNA
| Item | Value |
|---|---|
| gene id | trnas-gcu |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 48810352 ~ 48810433 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| dipeptidyl peptidase 3 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| trnas-gcu | True | 82 | mRNA | 0.51 | 1 | 48810352 | 48810433 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118940428 | NA | coding | downstream | 99122 | 48701449 ~ 48711230 (-) |
| ptdss2 | ptdss2 | coding | downstream | 112358 | 48661451 ~ 48697994 (-) |
| th | th | coding | downstream | 249520 | 48537830 ~ 48560832 (-) |
| commd9 | commd9 | coding | downstream | 353094 | 48449143 ~ 48457258 (-) |
| nap1l4a | LOC106560703 | coding | downstream | 425540 | 48319220 ~ 48384812 (-) |
| trnas-gcu-2 | NA | coding | upstream | 1038 | 48809911 ~ 48812873 (-) |
| trnas-gcu-3 | NA | coding | upstream | 2156 | 48812589 ~ 48812670 (-) |
| ifitm5 | LOC106560727 | coding | upstream | 265660 | 49076093 ~ 49078840 (-) |
| cat | cata | coding | upstream | 292553 | 49102986 ~ 49114529 (-) |
| syt12 | syt12 | coding | upstream | 304309 | 49114742 ~ 49155261 (-) |
| G152618 | NA | non-coding | downstream | 4149 | 48805952 ~ 48806203 (-) |
| G152605 | NA | non-coding | downstream | 12544 | 48797541 ~ 48797808 (-) |
| G152596 | NA | non-coding | downstream | 16148 | 48793939 ~ 48794204 (-) |
| G152594 | NA | non-coding | downstream | 18271 | 48791752 ~ 48792081 (-) |
| G152542 | NA | non-coding | downstream | 51347 | 48758783 ~ 48759005 (-) |
| G152833 | NA | non-coding | upstream | 168958 | 48979391 ~ 48979626 (-) |
| G152895 | NA | non-coding | upstream | 232593 | 49043026 ~ 49043255 (-) |
| G153535 | NA | non-coding | upstream | 401169 | 49211602 ~ 49211822 (-) |
| G153538 | NA | non-coding | upstream | 408874 | 49219307 ~ 49219528 (-) |
| peak1 | peak1 | non-coding | upstream | 527251 | 49166669 ~ 49427283 (-) |
| G152024 | NA | other | downstream | 506689 | 48303311 ~ 48303663 (-) |
| G151920 | NA | other | downstream | 583408 | 48226299 ~ 48226944 (-) |
| G151875 | NA | other | downstream | 622074 | 48187958 ~ 48188278 (-) |
| G151474 | NA | other | downstream | 959004 | 47850785 ~ 47851348 (-) |
| G150675 | LOC100653436 | other | downstream | 1604919 | 47194893 ~ 47205433 (-) |
| G154300 | NA | other | upstream | 1290997 | 50101430 ~ 50107447 (-) |
| G154338 | NA | other | upstream | 1346253 | 50156686 ~ 50157825 (-) |
| G155003 | NA | other | upstream | 1605310 | 50415743 ~ 50452147 (-) |
| G155072 | NA | other | upstream | 1769365 | 50579798 ~ 50581349 (-) |
| G155281 | LOC106560681 | other | upstream | 2160643 | 50971076 ~ 50971935 (-) |
