plscr3a (LOC106560726)


Basic Information

Item Value
gene id plscr3a
gene name LOC106560726
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 50124561 ~ 50127403 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564378.2
AAAACACACCTTACACGCCTGAATCACTTCTGATTGCGTCGATTACTTAGCACATACAGAGAACAACACCAACACAGAGAGCAACACCGTCAGAAGCTCTGGCAACAGATAGCAAGGAATTTGTATGCTGCTACTGATCCTACCACGCCATGGAAAATAGCTTTCGATCAACAGGAGTGCCCCCTGGCCTGGAGTACCTAACACAGATCGATCAAATCTTGATCCATCAGAAAATGGAACTGCTGGAGGCCATCACTTCCTTTGAGACTAAAAACCGGTACGTAATCAAGAACAGTTTGGGACAGGAAATCTACACGGCCAAGGAGGATAGTGACTGCTGCACCCGGAACTGCTGCGGTCCCAACCGCATGTTTGAGATGAAGATCAAAGACCACAGTGGCCAGGAGGTCATGCACCTGGTCAAGCCCTTCCGCTGCACCTCCTGCTTCTGGCCCTGCTGCCTGCAAGAGATGGAGGTCCAATCCCCTCCTAGCACCACCATAGGTTATGTGGTTCAGAACTGGCATCCCTTCAAGCCAAAACTGTCCATCCTAGGAGCTGCCAAAGAGACTCTCCTGACGATTGAAGGTCCTTTCTGTGCCTGTAGCTGCTGTGGAGATGTTGATTTTGAGGTGATGGGTAAGGACAGTGACCAGCCCATTGGGAGAATAAGTAAGCAGTGGAGTGGGCTGATAAAGGAGGCCTTCACTGACTCAGACAACTTTGGGATCCAGTTCCCCATGGACCTGGATGTCAAGATGAAGGCTGTGCTGATGGGGGCCTGCATCCTTATTGATTTCATGTTCTTTGAAAGGAGTGGTGACAGTGATCAACGGTGTTCTGTATTTGGATAAGAGATTGAGTTTTTGATCATGTACAAATTACATGATACTATAGTTGATAATGACATGGCTATTGGATGCATATGAATCACATAACATGACATTTAAGACAAAACAAATATGTGTTCTTTATTAATTCAATATATTCATCTGTATTTTGGATGTCTGAATACAATATTCAAACATTTGTAA

Function

NR:

description
phospholipid scramblase 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564378.2 True 1034 mRNA 0.46 7 50124561 50127403

Neighbor

gene id symbol gene type direction distance location
LOC110490984 LOC106560693 coding downstream 86669 49962896 ~ 50037892 (-)
LOC110490968 LOC105006464 coding downstream 287514 49801952 ~ 49837047 (-)
LOC118936760 NA coding downstream 385315 49738842 ~ 49739246 (-)
hmg20a hmg20a coding downstream 649190 49451688 ~ 49475371 (-)
peak1 peak1 coding downstream 697278 49166669 ~ 49427283 (-)
LOC118937274 NA coding upstream 2112 50129515 ~ 50131269 (-)
LOC110491057 LOC100136935 coding upstream 144815 50272218 ~ 50287727 (-)
LOC110491068 larp1 coding upstream 347229 50474632 ~ 50561307 (-)
rbm41 rbm41 coding upstream 537893 50665296 ~ 50678813 (-)
LOC110491182 LOC106602821 coding upstream 779233 50906636 ~ 50954275 (-)
G154310 NA non-coding downstream 4973 50119320 ~ 50119588 (-)
G154307 NA non-coding downstream 8310 50116049 ~ 50116251 (-)
G154271 LOC105007919 non-coding downstream 31256 50091176 ~ 50093305 (-)
G154249 NA non-coding downstream 139552 49984745 ~ 49985009 (-)
G154241 NA non-coding downstream 146743 49977608 ~ 49977818 (-)
G154313 NA non-coding upstream 320 50127723 ~ 50127951 (-)
G154316 NA non-coding upstream 4112 50131515 ~ 50131798 (-)
G154355 NA non-coding upstream 51400 50178803 ~ 50196982 (-)
G154430 NA non-coding upstream 174421 50301824 ~ 50304149 (-)
G154300 NA other downstream 17114 50101430 ~ 50107447 (-)
G152024 NA other downstream 1820898 48303311 ~ 48303663 (-)
G151920 NA other downstream 1897617 48226299 ~ 48226944 (-)
G151875 NA other downstream 1936283 48187958 ~ 48188278 (-)
G151474 NA other downstream 2273213 47850785 ~ 47851348 (-)
G154338 NA other upstream 29283 50156686 ~ 50157825 (-)
G155003 NA other upstream 288340 50415743 ~ 50452147 (-)
G155072 NA other upstream 452395 50579798 ~ 50581349 (-)
G155281 LOC106560681 other upstream 843673 50971076 ~ 50971935 (-)
LOC110491241 LOC106560679 other upstream 912467 51039870 ~ 51050197 (-)

Expression


Co-expression Network