XLOC_020643 (CABZ01085139.1)



Basic Information


Item Value
gene id XLOC_020643
gene name CABZ01085139.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 56644 ~ 57177 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00040840
gtGACTCTGGACTGCTCAGGCAGTGATGAAGCTCCGCGTGTGGATAAGTTAGTGGAGCGTATCCTGCACTGCAGCTGCCAGTCCTGCAGTAAAGAGAGCAGCCAGGAGGGGGCGCTGCTGCAGCTGTACCCTCATGAGGGAGCCCAGGACTTGCCATCACTGCCcgatgccacacacacacacccccagcACGCTCACATGCAAGCAGACCAAAGAGATGCAGACGCACATTTAGACATGCACGCGCCCGAGGCtgggtgaaacacacacacacacgcacatgcttTACACAGCCTACTGAATAACACTCTCCCTCTTCCTAAAGCACTTTCCTCACAACACTAATCAATACTTCAAGAATAAATGCGCTCACATTTGCAACTATATATTACTAGCTTTGTTTCTATTTTATGCACATTGTGGAATATTGCATACAATATTAATGGAAATACACATTAAAAACGATTAGACTTGGATAAACATTTGTCTGATAAGGAATAAACTCTGCTGTATACAGCTGTAGTAAGTAAACTC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000102687

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00040840 True 534 mRNA 0.46 1 56644 57177

Neighbor


gene id symbol gene type direction distance location
XLOC_020642 CABZ01085140.1 coding downstream 5766 44365 ~ 50878 (-)
XLOC_020641 NA coding downstream 20528 27146 ~ 36116 (-)
XLOC_020640 mrpl20 coding downstream 45818 9165 ~ 10826 (-)
XLOC_020639 atad3 coding downstream 49594 5156 ~ 7050 (-)
XLOC_020644 CABZ01101813.1 coding upstream 19292 76469 ~ 80533 (-)
XLOC_020645 ndufaf3 coding upstream 28420 85597 ~ 94519 (-)
XLOC_020646 NA coding upstream 43905 101082 ~ 101447 (-)
XLOC_020647 si:ch1073-335m2.2 coding upstream 73790 130967 ~ 155627 (-)
XLOC_020648 fblim1 coding upstream 100935 158112 ~ 164944 (-)
XLOC_020657 NA non-coding upstream 256533 313710 ~ 315380 (-)
XLOC_020664 NA non-coding upstream 335442 392619 ~ 395900 (-)
XLOC_020672 NA non-coding upstream 602740 659917 ~ 697504 (-)
XLOC_020673 NA non-coding upstream 643036 700213 ~ 704907 (-)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000186_00542490_00549351 NBL1 coding CI01000186 null 542490 ~ 549605 (+)