Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110491287 |
| gene name | LOC106602850 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 51233705 ~ 51236559 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: beta-crystallin A1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021564639.2 | True | 1157 | mRNA | 0.50 | 5 | 51233705 | 51236559 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110491269 | LOC106560677 | coding | upstream | 96805 | 51114207 ~ 51136900 (+) |
| LOC118944166 | NA | coding | upstream | 138858 | 51094723 ~ 51094847 (+) |
| LOC110491259 | LOC106560678 | coding | upstream | 146574 | 51067491 ~ 51087131 (+) |
| sat2b | sat2 | coding | upstream | 225153 | 50982958 ~ 51008552 (+) |
| LOC110491193 | LOC106560681 | coding | upstream | 261532 | 50960131 ~ 50972173 (+) |
| LOC110491302 | LOC106560674 | coding | downstream | 11182 | 51247741 ~ 51294746 (+) |
| LOC110501653 | LOC106560673 | coding | downstream | 80562 | 51317121 ~ 51339537 (+) |
| LOC110491314 | LOC106560671 | coding | downstream | 138765 | 51375324 ~ 51405615 (+) |
| rl28 | rl28 | coding | downstream | 175562 | 51412121 ~ 51417154 (+) |
| LOC118944199 | NA | coding | downstream | 185297 | 51421856 ~ 51422029 (+) |
| G154817 | NA | non-coding | upstream | 85808 | 51145536 ~ 51147897 (+) |
| G154837 | NA | non-coding | upstream | 121930 | 51111535 ~ 51111775 (+) |
| G154836 | NA | non-coding | upstream | 124631 | 51108800 ~ 51109074 (+) |
| G154829 | NA | non-coding | upstream | 135264 | 51098221 ~ 51098441 (+) |
| G154825 | NA | non-coding | upstream | 142988 | 51090489 ~ 51090717 (+) |
| G154901 | NA | non-coding | downstream | 58243 | 51294802 ~ 51299854 (+) |
| G155515 | NA | non-coding | downstream | 114067 | 51350626 ~ 51355466 (+) |
| G155489 | NA | non-coding | downstream | 151418 | 51387977 ~ 51400214 (+) |
| G155491 | NA | non-coding | downstream | 173778 | 51410337 ~ 51410863 (+) |
| G155492 | NA | non-coding | downstream | 194307 | 51430866 ~ 51501997 (+) |
| G154859 | NA | other | upstream | 66531 | 51165415 ~ 51167174 (+) |
| LOC110491026 | LOC106560691 | other | upstream | 1133231 | 50098387 ~ 50100624 (+) |
| G152167 | NA | other | upstream | 2676019 | 48556782 ~ 48557686 (+) |
| G150997 | NA | other | upstream | 3686126 | 47497948 ~ 47547579 (+) |
| uevld | uevld | other | upstream | 4248479 | 46981686 ~ 47007672 (+) |
| G155541 | NA | other | downstream | 184288 | 51420847 ~ 51421122 (+) |
| G156000 | LOC106560791 | other | downstream | 579951 | 51816510 ~ 51824182 (+) |
| G158778 | LOC106560766 | other | downstream | 2785049 | 54021608 ~ 54021904 (+) |
