LOC118944199


Basic Information

Item Value
gene id LOC118944199
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 51421856 ~ 51422029 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>LOC118944199
atatattttattaaaaaaaaatctgttcttatcagtttaatatctgatacgtccccaatcgggggactacatattaaatggatttttcgaacagggattcggaaatggggcttgctccgaccgctccacgcatcgacccggtattgcagtatctccgggaacggtgcaacactt

Function

NR:

description
LOC569167 protein, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
LOC118944199 True 174 mRNA 0.43 1 51421856 51422029

Neighbor

gene id symbol gene type direction distance location
rl28 rl28 coding upstream 4702 51412121 ~ 51417154 (+)
LOC110491314 LOC106560671 coding upstream 16241 51375324 ~ 51405615 (+)
LOC110501653 LOC106560673 coding upstream 82319 51317121 ~ 51339537 (+)
LOC110491302 LOC106560674 coding upstream 127110 51247741 ~ 51294746 (+)
LOC110491287 LOC106602850 coding upstream 185297 51233705 ~ 51236559 (+)
LOC118944142 NA coding downstream 308 51422337 ~ 51422453 (+)
LOC118944140 NA coding downstream 7425 51429454 ~ 51429572 (+)
cspg4 cspg4 coding downstream 1481162 52903191 ~ 53018812 (+)
snupn snupn coding downstream 1711468 53133497 ~ 53167781 (+)
ptpn9a ptpn9 coding downstream 1783052 53205081 ~ 53249227 (+)
G155491 NA non-coding upstream 10993 51410337 ~ 51410863 (+)
G155489 NA non-coding upstream 21642 51387977 ~ 51400214 (+)
G155515 NA non-coding upstream 66390 51350626 ~ 51355466 (+)
G154901 NA non-coding upstream 122002 51294802 ~ 51299854 (+)
G154817 NA non-coding upstream 273959 51145536 ~ 51147897 (+)
G155492 NA non-coding downstream 8837 51430866 ~ 51501997 (+)
G155845 NA non-coding downstream 170813 51592842 ~ 51593164 (+)
G155940 LOC106613263 non-coding downstream 305492 51727521 ~ 51835110 (+)
G156000 LOC106560791 non-coding downstream 394481 51816510 ~ 51824182 (+)
G156027 NA non-coding downstream 443443 51865472 ~ 51889131 (+)
G155541 NA other upstream 734 51420847 ~ 51421122 (+)
G154859 NA other upstream 254682 51165415 ~ 51167174 (+)
LOC110491026 LOC106560691 other upstream 1321382 50098387 ~ 50100624 (+)
G158778 LOC106560766 other downstream 2599579 54021608 ~ 54021904 (+)
G159415 NA other downstream 2930954 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 3306267 54728296 ~ 54728860 (+)
G160569 NA other downstream 4524114 55946143 ~ 55947245 (+)

Expression


Co-expression Network