Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118944140 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 51429454 ~ 51429572 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118944140 | True | 119 | mRNA | 0.54 | 1 | 51429454 | 51429572 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944142 | NA | coding | upstream | 7001 | 51422337 ~ 51422453 (+) |
| LOC118944199 | NA | coding | upstream | 7425 | 51421856 ~ 51422029 (+) |
| rl28 | rl28 | coding | upstream | 12300 | 51412121 ~ 51417154 (+) |
| LOC110491314 | LOC106560671 | coding | upstream | 23839 | 51375324 ~ 51405615 (+) |
| LOC110501653 | LOC106560673 | coding | upstream | 89917 | 51317121 ~ 51339537 (+) |
| cspg4 | cspg4 | coding | downstream | 1473619 | 52903191 ~ 53018812 (+) |
| snupn | snupn | coding | downstream | 1703925 | 53133497 ~ 53167781 (+) |
| ptpn9a | ptpn9 | coding | downstream | 1775509 | 53205081 ~ 53249227 (+) |
| sin3aa | sin3a | coding | downstream | 1823236 | 53252808 ~ 53285424 (+) |
| wdr61 | wdr61 | coding | downstream | 1921528 | 53351100 ~ 53370380 (+) |
| G155491 | NA | non-coding | upstream | 18591 | 51410337 ~ 51410863 (+) |
| G155489 | NA | non-coding | upstream | 29240 | 51387977 ~ 51400214 (+) |
| G155515 | NA | non-coding | upstream | 73988 | 51350626 ~ 51355466 (+) |
| G154901 | NA | non-coding | upstream | 129600 | 51294802 ~ 51299854 (+) |
| G154817 | NA | non-coding | upstream | 281557 | 51145536 ~ 51147897 (+) |
| G155492 | NA | non-coding | downstream | 1294 | 51430866 ~ 51501997 (+) |
| G155845 | NA | non-coding | downstream | 163270 | 51592842 ~ 51593164 (+) |
| G155940 | LOC106613263 | non-coding | downstream | 297949 | 51727521 ~ 51835110 (+) |
| G156000 | LOC106560791 | non-coding | downstream | 386938 | 51816510 ~ 51824182 (+) |
| G156027 | NA | non-coding | downstream | 435900 | 51865472 ~ 51889131 (+) |
| G155541 | NA | other | upstream | 8332 | 51420847 ~ 51421122 (+) |
| G154859 | NA | other | upstream | 262280 | 51165415 ~ 51167174 (+) |
| LOC110491026 | LOC106560691 | other | upstream | 1328980 | 50098387 ~ 50100624 (+) |
| G158778 | LOC106560766 | other | downstream | 2592036 | 54021608 ~ 54021904 (+) |
| G159415 | NA | other | downstream | 2923411 | 54352983 ~ 54353388 (+) |
| G159889 | LOC106562215 | other | downstream | 3298724 | 54728296 ~ 54728860 (+) |
| G160569 | NA | other | downstream | 4516571 | 55946143 ~ 55947245 (+) |
