ptpn9a (ptpn9)


Basic Information

Item Value
gene id ptpn9a
gene name ptpn9
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 53205081 ~ 53249227 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021564770.2
TAGTGCTGCTGGCAGAATAGTAGTCCAGGCGACGTACGTAGAGAATAAAAGATTGAACACCATGCCTTTTGACTTTACTCTTGATTCTTAGCAAAGGTGGGTGACTTTACTGGCTGGACAAATGGGTCAAATTCGATCAACTGCGATTCGTCCCAGAGAAACGCCAAACTGTTGAGGACTAATTTCTTCAGTACTCGAGAAGATTTGACACAACAGCGATTTTCGCTCATGCATGAGTATTTTGATGGAAGATTCCATATAATTTCTTATTCGACTAAAACAGGCCAGACGAACAAAAACAGTATAAGCTTTCCATTTCTATATGAGGAACATTTCAGTTTTGTGAAATGCCAGTAACCTAGGCAAAACCGGTTGATGTACTGCCCGGTACGAGGATAGAACTGTCGTCGTTTACCTTTACGAAAAATAAGGGGAAAAAGGCCACCAAGTTGAAAAATTAAGGTGTCAATCTCAAGAACGAGACTGAAGAATGGCAGCCAGTTTGTCAGCGGAGGAAGAACAGGCTACAAAGGAGTTTCTGGAGGAAATCAACAAGTGGACCACTCAGCATGGAGTGTCCCCCCTGTCCTGGGAAGTGGCCGTCAAGTTCCTCATGGCGCGCAAGTTCGACGTGCTCCGGGCCATCGAGCTCTTCCACAGCTacaggGAGACCCGTCTGAAAGAGGGCATTGTCAAACTacagccccaggaggaacctctGCGCTCAGAACTGCTCAGTGGAAAGTTCACTGTGCTGAGTGTGCGAGACCCATCAGGTGCCTCCATAGCCTTGTACACGGCCAAACTCCACCACCCCAACAAGACAGGCAACCATGTTGTCCTGCAAGCTCTTTTCTACCTCCTGGACCAGGCTGTGGAGAGctTTGAAACTCAAAGAAACGGCCTGGTGTTCATTTACGACATGGCGGGCTCCAACTACACCAACTTTGAGCTGGACCTGAGCAAGAAGATCCTCAACTTACTCAAGGGGGCGTTCCCTGCCAGGCTGAAGAAAGTGTTGATAGTGGGTGCCCCTGTCTGGTTCCGCGTGCCCTACAACCTGCTGAGCCTGCTGCTTAAGGAGAAACTCAGGGAGAGGgtcCAGATGGTCAGAATGTCTGACCTATGCCAGCACCTCCCACGGGACTGTCTCCCTGAGCACCTGGGGGGGCTGCTGCCCCTGGATGCCCACGGCTGGAACCAGCAGCTTCTGGCTGGGCAGAACGGCCGTGTGGACCCCGTGGATGAGCTGGTTGGCATCCCCCTGGAGGACTCGTCGGTCCACAACCCTGGGCCTGAGGCCATGCGTCTGCCTGAGTTCATGGCCCACCTGGGCAGGCTCCAGCGCTCAGGCATCCACCTGGAGTATGAGGAAATCCGCAAGGAGCAACCACCTGGGACATTCCATTGTGCCCTTACTGCATACAACCAGGAGAGGAATCGCTATGGGGATGTCCTGTGTCTTGACCAAACAAGAGTTCACCTGAAAACCAGAAGAAACGAGAGATCAGATTACATCAATGCCAGCTTCATGGACGGCTACAAACAGAAGAATGCGTACATCGGTACTCAAGgaccactggAGAAAACCTATGGGGATTTCTGGAGGATGGTCTGGGAGCAAAACGTGCTAGTCATTGTCATGACAACAAGAGCGGACGAGGGAGGTCGGAAGAAGTGTGGTCAGTACTGGCCTCTAGAGGAAGGCGGCCAGGAGGTGTATGGTCACATGGCTGTGGTCAACCAGAGGGTGGACAATCACTCCCACTACAACCAGACCACCCTGGAGCTGCACAACATGGAGaattGTGAGCAGAGGCAGGTGACCCACTTCCAGTACCTGAGCTGGCCCGACTACGGCGTCCCCACCTCGGCCGTGACACTCATTGACTTTCTGGGGGCTGTCAAGAGGCAGCAGAGGCGGTCAGTGAAGACCATGGGGCCCCAGTGGAGGGGCCACCCCTTGGGACCCCCCATGGTGGTTCACTGCAGTGCTGGCATCGGCAGAACAGgtaCCTTCTGTGCCCTGGACATCTGTCTGTCCCAGCTGCAGGATGTGGGGACGCTCAACGTGTGTCAGACGGTGCGGCGGATGAGAACGCAGAGGGCCTTCACCATCCAGACCCCAGACCAGTACTACTTCTGCCACAACGCCATCCTGGAGCACGCTCAGAGACAGGGCCTGCTCTCAGCCAATCAGTGATGCCTGGGGGTCGCCTCATAGTTCTCACGGCCAATCTGTGATGCCCTGGATGTTGTCGTAGCCTATCAGTGACCCTTCTCGCAGCCAATCTGTGAATCCAGGGGACACTTTGTAGCCAATCAGCATGCCCACTTCTAGCAAATGCCATCACTTCTTCCCTTTTTAAGAGGCCTTTAAGACCAACTCATTCCTCCTTCTGACTCTGCCACTTCTGACAGAGCCACAGTTGTGATGAAAAATGTTAGATAGTAAGACATAATAACATACAAGACACAGCAACCTGGCAACAAATGTTGTCAGTTTTGTGTCTTCTGAGGAAGATTTTGAATCATTATGTGACCGTTATCTGTGTCTATGCGAGTCTGTCGTTAGTGTTGTGACGCACATCATTCGCTTTGGTGTCTTGTGTGATCCAGATACTTAGCAGTAACCGATGACATGAACTTTGCGTTCAACTTCCTTTTTTAAGAACCTATCACATCTGTGACCAGTTCAGTGGTCTTTGAGAAGGctttttctcttgctctctccctctctccatcctctacctgtgaaagcagagaagaatggtattggagaagaaagtaagaaTAGTTTTTTTTCAATGGTCTTTTGCCTCTTGGTATTGTCGTTGTGACCTTAGCGATACAACTATACTTGGCATACAAGCATTGAACCCCTCCTgggatgaccccccccccccccccccccaacttccCCTGGGCCATTGAATCGAATGGCTACATGTAGAAGTTGCCCCTGAGATGCATGTGGACTTCTCATCTTACCCTACCCCCAATCCAAGCCTCAACCATTGAGAGTTAAAATGCATAGATGACCTTAAATTCAACTTTAAGTAATACTAAACACATTAATGTTTTTGTGAGCAGCTGATAAAGTTGGTATCTCAATGCATTTCCTACAGATCTAATAATTAAGAGCTGGCCTCCTGACAACACATGAACCATCTGCCTTCACTCTGTTATTGTAAGTCATTCACATTGGCTGTTCAAACGTTCCTTGTGAAAATCTTGTAGTGATCGTGACATTAAATGTTTGGTCGCCGCTGCTTTCACTCAGTAGTTGTTCCGTATGCTTCAGTTGTGTCATGTACGTCTATTGAGCCTCCTATGCTGCGATGGACCTGGTGTAGGAAGGCCATAACCCTGCTTCCGCTTTAAGACACCAGTCCTAGACCTCACCTCAGTAAAGTGCAATAGACTTTTATACACAGCCATGTTGAAGCACTTTGTGCTTTTAGAGATTACAGTTCTTGTGTTGGTAAAGTGCATTTAAGGTGAAATTACAATTGTAGGAGATTGTATACGTGTGatatacggtgccttcagaaagtattcacacttatttacttattccacattttgttacagcctgaattaaatattttttttttctcacccatctacacacaatacctcataatgacaaagtgaaaaccatgttttgttttttttattacattttattgaaaattaaatacagaaatcgaatgtacataagtattcacacccctgagtcaatactttgtagaagcatctttggcagtgattacagctttaTGTTTTCTTGGGTAAGTTtaagagctttgtacacctggattttacaatcttggtaagcaactccagtgtagatttggccttatgttttaggtaattgtcttgctgaaaggtgaatttgtctaccAGTGTCCTTTGGAAAGCAGagtgaaccaggtttttctctaggatttttttatttgcttatagctgtattctgtttctttttagcTTAAACtcccttgccaatgacaagcatacccataacatgatgcagccaccaccatgctagaaaatatgaagtggtactcattgatgttggattttccccaaacacaaAGTTTTGTATTCAGGgaaaaagtgaatttctttgccacattactttaagtgccttgttgcaaacaatgTACATGTTTTGGAATTTGCGTATCCTGTACGGGCTTCCTATTCACTCTGTCATTAGGTTAgtattgggaaagggggatacctagtcagttgtacaactgaaatgtgtcttcattgtggagtaactacaatgttccATTCTCATATTACAACCATTAAATTCTAACTGTTTTAAAACCA
>XM_021564780.2
GTTTTAGCATTAGCTAGCCTAGAATGCATTGCTGAAGATAATTTGAAGTTTTAATTAAAATCTAGCAGTATTTAATTGTTCTCAAGGTATAATTAGGAGTACAGCGCCCTCTCCCATCCCTGGATTCAGGCTACAAAGGAGTTTCTGGAGGAAATCAACAAGTGGACCACTCAGCATGGAGTGTCCCCCCTGTCCTGGGAAGTGGCCGTCAAGTTCCTCATGGCGCGCAAGTTCGACGTGCTCCGGGCCATCGAGCTCTTCCACAGCTacaggGAGACCCGTCTGAAAGAGGGCATTGTCAAACTacagccccaggaggaacctctGCGCTCAGAACTGCTCAGTGGAAAGTTCACTGTGCTGAGTGTGCGAGACCCATCAGGTGCCTCCATAGCCTTGTACACGGCCAAACTCCACCACCCCAACAAGACAGGCAACCATGTTGTCCTGCAAGCTCTTTTCTACCTCCTGGACCAGGCTGTGGAGAGctTTGAAACTCAAAGAAACGGCCTGGTGTTCATTTACGACATGGCGGGCTCCAACTACACCAACTTTGAGCTGGACCTGAGCAAGAAGATCCTCAACTTACTCAAGGGGGCGTTCCCTGCCAGGCTGAAGAAAGTGTTGATAGTGGGTGCCCCTGTCTGGTTCCGCGTGCCCTACAACCTGCTGAGCCTGCTGCTTAAGGAGAAACTCAGGGAGAGGgtcCAGATGGTCAGAATGTCTGACCTATGCCAGCACCTCCCACGGGACTGTCTCCCTGAGCACCTGGGGGGGCTGCTGCCCCTGGATGCCCACGGCTGGAACCAGCAGCTTCTGGCTGGGCAGAACGGCCGTGTGGACCCCGTGGATGAGCTGGTTGGCATCCCCCTGGAGGACTCGTCGGTCCACAACCCTGGGCCTGAGGCCATGCGTCTGCCTGAGTTCATGGCCCACCTGGGCAGGCTCCAGCGCTCAGGCATCCACCTGGAGTATGAGGAAATCCGCAAGGAGCAACCACCTGGGACATTCCATTGTGCCCTTACTGCATACAACCAGGAGAGGAATCGCTATGGGGATGTCCTGTGTCTTGACCAAACAAGAGTTCACCTGAAAACCAGAAGAAACGAGAGATCAGATTACATCAATGCCAGCTTCATGGACGGCTACAAACAGAAGAATGCGTACATCGGTACTCAAGgaccactggAGAAAACCTATGGGGATTTCTGGAGGATGGTCTGGGAGCAAAACGTGCTAGTCATTGTCATGACAACAAGAGCGGACGAGGGAGGTCGGAAGAAGTGTGGTCAGTACTGGCCTCTAGAGGAAGGCGGCCAGGAGGTGTATGGTCACATGGCTGTGGTCAACCAGAGGGTGGACAATCACTCCCACTACAACCAGACCACCCTGGAGCTGCACAACATGGAGaattGTGAGCAGAGGCAGGTGACCCACTTCCAGTACCTGAGCTGGCCCGACTACGGCGTCCCCACCTCGGCCGTGACACTCATTGACTTTCTGGGGGCTGTCAAGAGGCAGCAGAGGCGGTCAGTGAAGACCATGGGGCCCCAGTGGAGGGGCCACCCCTTGGGACCCCCCATGGTGGTTCACTGCAGTGCTGGCATCGGCAGAACAGgtaCCTTCTGTGCCCTGGACATCTGTCTGTCCCAGCTGCAGGATGTGGGGACGCTCAACGTGTGTCAGACGGTGCGGCGGATGAGAACGCAGAGGGCCTTCACCATCCAGACCCCAGACCAGTACTACTTCTGCCACAACGCCATCCTGGAGCACGCTCAGAGACAGGGCCTGCTCTCAGCCAATCAGTGATGCCTGGGGGTCGCCTCATAGTTCTCACGGCCAATCTGTGATGCCCTGGATGTTGTCGTAGCCTATCAGTGACCCTTCTCGCAGCCAATCTGTGAATCCAGGGGACACTTTGTAGCCAATCAGCATGCCCACTTCTAGCAAATGCCATCACTTCTTCCCTTTTTAAGAGGCCTTTAAGACCAACTCATTCCTCCTTCTGACTCTGCCACTTCTGACAGAGCCACAGTTGTGATGAAAAATGTTAGATAGTAAGACATAATAACATACAAGACACAGCAACCTGGCAACAAATGTTGTCAGTTTTGTGTCTTCTGAGGAAGATTTTGAATCATTATGTGACCGTTATCTGTGTCTATGCGAGTCTGTCGTTAGTGTTGTGACGCACATCATTCGCTTTGGTGTCTTGTGTGATCCAGATACTTAGCAGTAACCGATGACATGAACTTTGCGTTCAACTTCCTTTTTTAAGAACCTATCACATCTGTGACCAGTTCAGTGGTCTTTGAGAAGGctttttctcttgctctctccctctctccatcctctacctgtgaaagcagagaagaatggtattggagaagaaagtaagaaTAGTTTTTTTTCAATGGTCTTTTGCCTCTTGGTATTGTCGTTGTGACCTTAGCGATACAACTATACTTGGCATACAAGCATTGAACCCCTCCTgggatgaccccccccccccccccccccaacttccCCTGGGCCATTGAATCGAATGGCTACATGTAGAAGTTGCCCCTGAGATGCATGTGGACTTCTCATCTTACCCTACCCCCAATCCAAGCCTCAACCATTGAGAGTTAAAATGCATAGATGACCTTAAATTCAACTTTAAGTAATACTAAACACATTAATGTTTTTGTGAGCAGCTGATAAAGTTGGTATCTCAATGCATTTCCTACAGATCTAATAATTAAGAGCTGGCCTCCTGACAACACATGAACCATCTGCCTTCACTCTGTTATTGTAAGTCATTCACATTGGCTGTTCAAACGTTCCTTGTGAAAATCTTGTAGTGATCGTGACATTAAATGTTTGGTCGCCGCTGCTTTCACTCAGTAGTTGTTCCGTATGCTTCAGTTGTGTCATGTACGTCTATTGAGCCTCCTATGCTGCGATGGACCTGGTGTAGGAAGGCCATAACCCTGCTTCCGCTTTAAGACACCAGTCCTAGACCTCACCTCAGTAAAGTGCAATAGACTTTTATACACAGCCATGTTGAAGCACTTTGTGCTTTTAGAGATTACAGTTCTTGTGTTGGTAAAGTGCATTTAAGGTGAAATTACAATTGTAGGAGATTGTATACGTGTGatatacggtgccttcagaaagtattcacacttatttacttattccacattttgttacagcctgaattaaatattttttttttctcacccatctacacacaatacctcataatgacaaagtgaaaaccatgttttgttttttttattacattttattgaaaattaaatacagaaatcgaatgtacataagtattcacacccctgagtcaatactttgtagaagcatctttggcagtgattacagctttaTGTTTTCTTGGGTAAGTTtaagagctttgtacacctggattttacaatcttggtaagcaactccagtgtagatttggccttatgttttaggtaattgtcttgctgaaaggtgaatttgtctaccAGTGTCCTTTGGAAAGCAGagtgaaccaggtttttctctaggatttttttatttgcttatagctgtattctgtttctttttagcTTAAACtcccttgccaatgacaagcatacccataacatgatgcagccaccaccatgctagaaaatatgaagtggtactcattgatgttggattttccccaaacacaaAGTTTTGTATTCAGGgaaaaagtgaatttctttgccacattactttaagtgccttgttgcaaacaatgTACATGTTTTGGAATTTGCGTATCCTGTACGGGCTTCCTATTCACTCTGTCATTAGGTTAgtattgggaaagggggatacctagtcagttgtacaactgaaatgtgtcttcattgtggagtaactacaatgttccATTCTCATATTACAACCATTAAATTCTAACTGTTTTAAAACCA

Function

symbol description
ptpn9 Enables protein tyrosine phosphatase activity. Acts upstream of or within negative regulation of neuron projection development; peptidyl-tyrosine dephosphorylation; and positive regulation of protein localization to plasma membrane. Located in cytoplasm and neuron projection terminus.

NR:

description
tyrosine-protein phosphatase non-receptor type 9

GO: NA

KEGG:

id description
K18038 PTPN9, MEG2; tyrosine-protein phosphatase non-receptor type 9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021564770.2 False 4344 mRNA 0.47 13 53205081 53249227
XM_021564780.2 True 3950 mRNA 0.47 13 53205886 53249227

Neighbor

gene id symbol gene type direction distance location
snupn snupn coding upstream 37300 53133497 ~ 53167781 (+)
cspg4 cspg4 coding upstream 186269 52903191 ~ 53018812 (+)
LOC118944140 NA coding upstream 1775509 51429454 ~ 51429572 (+)
LOC118944142 NA coding upstream 1782628 51422337 ~ 51422453 (+)
LOC118944199 NA coding upstream 1783052 51421856 ~ 51422029 (+)
sin3aa sin3a coding downstream 3581 53252808 ~ 53285424 (+)
wdr61 wdr61 coding downstream 101873 53351100 ~ 53370380 (+)
ireb2 ireb2 coding downstream 166886 53416113 ~ 53438769 (+)
psma4 psma4 coding downstream 194821 53444044 ~ 53466316 (+)
rbpms2a LOC106560779 coding downstream 388078 53637305 ~ 53651854 (+)
G157986 NA non-coding upstream 76060 53121169 ~ 53129021 (+)
G157726 NA non-coding upstream 111984 53092833 ~ 53093097 (+)
G157500 NA non-coding upstream 419496 52742500 ~ 52785585 (+)
G157499 NA non-coding upstream 463321 52741544 ~ 52741760 (+)
G157495 NA non-coding upstream 465659 52739081 ~ 52739422 (+)
G158109 crabp1 non-coding downstream 62797 53312024 ~ 53343526 (+)
G158167 NA non-coding downstream 141023 53390250 ~ 53391247 (+)
G158182 NA non-coding downstream 163293 53412520 ~ 53412744 (+)
G158212 NA non-coding downstream 247630 53496857 ~ 53497265 (+)
G156000 LOC106560791 other upstream 1380899 51816510 ~ 51824182 (+)
G155541 NA other upstream 1783959 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 1787963 51412121 ~ 51417154 (+)
LOC110501653 LOC106560673 other upstream 1882648 51317121 ~ 51339537 (+)
G154859 NA other upstream 2037907 51165415 ~ 51167174 (+)
G158778 LOC106560766 other downstream 772381 54021608 ~ 54021904 (+)
G159415 NA other downstream 1103756 54352983 ~ 54353388 (+)
G159889 LOC106562215 other downstream 1479069 54728296 ~ 54728860 (+)
G160569 NA other downstream 2696916 55946143 ~ 55947245 (+)
G161687 NA other downstream 2995817 56245044 ~ 56252598 (+)

Expression


Co-expression Network