XLOC_020646


Basic Information

Item Value
gene id XLOC_020646
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 101082 ~ 101447 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00042226
GGTGCAGGTTGAAGGCCAGCAGCACGTTGATGAAGAGGTCCGGCAGCTGCTCAGTGCTGTCTGTGGGCAACCCGTCCTCAATCACATCCAGCAGGAACTGCAGGAAACCAGCGTTCAGCAGACAGAAAACCGGCAGACCGCTCGGGGCAGTGGCAGCTGTACGGgtcgggatcatccgcatgtctagcagacAAATATTACAGCACAATgtgcagcgatcgccg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00042226 True 224 lncRNA 0.58 2 101082 101447

Neighbor

gene id symbol gene type direction distance location
XLOC_020645 ndufaf3 coding downstream 6563 85597 ~ 94519 (-)
XLOC_020644 CABZ01101813.1 coding downstream 20549 76469 ~ 80533 (-)
XLOC_020643 CABZ01085139.1 coding downstream 43905 56644 ~ 57177 (-)
XLOC_020642 CABZ01085140.1 coding downstream 50204 44365 ~ 50878 (-)
XLOC_020641 NA coding downstream 64966 27146 ~ 36116 (-)
XLOC_020647 si:ch1073-335m2.2 coding upstream 29520 130967 ~ 155627 (-)
XLOC_020648 fblim1 coding upstream 56665 158112 ~ 164944 (-)
XLOC_020649 slc25a34 coding upstream 83223 184670 ~ 188112 (-)
XLOC_020650 fbxo42 coding upstream 90484 191931 ~ 193234 (-)
XLOC_020651 ora1 coding upstream 107197 208644 ~ 209741 (-)
XLOC_020657 NA non-coding upstream 212263 313710 ~ 315380 (-)
XLOC_020664 NA non-coding upstream 291172 392619 ~ 395900 (-)
XLOC_020672 NA non-coding upstream 558470 659917 ~ 697504 (-)
XLOC_020673 NA non-coding upstream 598766 700213 ~ 704907 (-)
XLOC_020675 NA non-coding upstream 631797 733244 ~ 735244 (-)

Expression


Co-expression Network