chrm4b (LOC106560739)


Basic Information

Item Value
gene id chrm4b
gene name LOC106560739
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54209058 ~ 54210956 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565432.2
AATTACACTGAAGATTTTGAGTCTTTCTTCTAATTTGAGGGGTAAGTTTATCAGTTAATTCCTGTAAAATATGTAACCCGCATGAATGCAAACAGTATGACAACTTCTAGTGCACAGGTTTGTTTTTCATTCGGCAAGCATACTTCACCTGATCCAACTTGGAAAGTTACATTAGAATTCCCCTTTAGCAATGCATAAAACATTTCTCCACATTAGCTTTTGATAGGCATaggttatatatttatatctcaACATAGACCATAGAATAAAAATACATAGCAGTGTTTATTACAATGCAATTCCCTAATCTATTCCTGATTATTCATCTAATAATTACAAGCACAAAAGGTGTTGCTTTGTGAAAATTCTGGATGGGCAATTAAAATTGAATAGAGGACATTGTAACCATTTTTCGGATGAGATATTTGATCAAAAATCTTCAAATGCAACCTTAGGTATTcaattttttgtttatttgtttgttttcatCAAGTGCCTTCATCTGATATGGAAGACAACGTCAGCTGGGTCCATCCCTACGGCAACCACTCCTATGGAGCTTATGGGAGACCAGGCTGCCGTTACACCACTGCTGAACTGATCCTCATCGTCATAGTGACCGGCTCGCTCAGCTTCATCACCGTCCTGGGCAACGTCCTGGTGATGCTGTCAATCAAAGTCAACCGCCACCTCCAGACAGTCAACAACTACTTCCTGTTCAGCCTGGCGTGTGCTGACCTCATCATCGGTCTTCTCTCCATGAACCTCTACACCCTCTATATCGTCAAGGGCTACTGGCCCCTGGGTGCGGTCATCTGTGACCTGTGGTTGGCCTTGGACTACGTGGTCAGCAACGCTTCGGTTATGAACCTCCTGATCATCTGCTTCGACCGCTACTTCTGCGTGACCCGACCATTGACCTACCCATCCAAGCGGACCACCAGACTGGCTGGGCTGATGATCGCAGCAGCCTGGCTCCTGTCTCTGTTCCTTTGGGCCCCGGCCATCCTCTTCTGGCAGTCCTTCGTCGGCAAACGGATCGTCCCTGATGGGGAGTGCTACATCCAGCTCCTGTCCAAACCCTCGGTTACACTGGGGATGACACTATCTGCATTCTACCTGCCGGCGGTCATCATGATTGTCCTGTACACCCGGATCTCCTTTGCCAGCCGCAGTCGCCTCACTGCAGAGCTGCATAGTAGCAGAGCGAGGACCTCTAGTGGACGACCGAAACAAAGCTGCCATCTGAAGAGGAGCTGTGTCTCAACCCAGACAGACACTGAGCCAAAGAGCGACTTGGCCATTTCCATCGAAGCAGAGACGAGTATCTGCGCTAAGCAGGGGATTATCAAGGCCCTGAAAGACTCTACAGAGCAGGCCAACAATAATGTCATCCCCACTTCAGATGTTATCCCCTCTCTAGACCAATTACCTAGTGAGATTAACCAAGACTGCAGATGGTCCAACAGTAGGGTCACGTTCACAGGGGATAAGAACAGCTCTGCTACCAAGGTCTCCCAGCCAAGCTCTATCCTTAATGGCTCCAATACAACTAGTCAGCTCAGAAAAATGGTTTCCCCATTTCCCAGCTTCAGTAAGACCCAGGTGAAGAGGAGAAGGATTGTAGCGAGGGAGAGGAAAGTGACCAAGACTATTTTTGCTATTCTCCTGGCCTTCATTCTCACCTGGACTCCTTATAGCGTCATGGCCATCATTGGCACCTACTGTCACTTCTGCGTCCCAGACACAGCGTGGACCATGGGCTACTGGCTGTGTTATATCAACAGCACAGTCAACCCAGCGTGCTATGCACTGTGTAACGTCACCTTCAGAAAGACCTTCAAGAACCTACTGAGGTGTCAGTACAGAAACACAGGTGTTGAAGTGAGGATGATGTGA

Function

NR:

description
muscarinic acetylcholine receptor M4-like

GO:

id name namespace
GO:0050789 regulation of biological process biological_process
GO:0016020 membrane cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565432.2 True 1899 mRNA 0.47 1 54209058 54210956

Neighbor

gene id symbol gene type direction distance location
phf21ab LOC106560766 coding downstream 150902 53996094 ~ 54058156 (-)
prdm11 LOC106560765 coding downstream 213480 53977928 ~ 53995578 (-)
cd59 cd59-2 coding downstream 237691 53969443 ~ 53971367 (-)
adpgk adpgk coding downstream 266817 53930055 ~ 53942241 (-)
ppib ppib coding downstream 315210 53890909 ~ 53893848 (-)
ambra1b LOC106560763 coding upstream 2646 54213602 ~ 54268394 (-)
nox5 nox5 coding upstream 70760 54281716 ~ 54298946 (-)
coro2bb coro2b coding upstream 92409 54303365 ~ 54339835 (-)
fem1b fem1b coding upstream 247709 54458665 ~ 54462837 (-)
LOC110491804 LOC106560756 coding upstream 310186 54510925 ~ 54525000 (-)
G159292 NA non-coding downstream 15495 54192843 ~ 54193563 (-)
G159290 LOC106560764 non-coding downstream 22848 54185108 ~ 54186210 (-)
G159201 NA non-coding downstream 150376 54058418 ~ 54058682 (-)
G159197 NA non-coding downstream 175140 54033712 ~ 54033918 (-)
G159196 NA non-coding downstream 175430 54033380 ~ 54033628 (-)
G159342 NA non-coding upstream 80635 54291591 ~ 54291836 (-)
G159343 NA non-coding upstream 80949 54291905 ~ 54292247 (-)
G159344 NA non-coding upstream 82952 54293908 ~ 54294120 (-)
G159120 NA other downstream 351506 53856686 ~ 53857552 (-)
snx33 snx33 other downstream 1096767 53032902 ~ 53112547 (-)
G155610 NA other downstream 2791948 51412269 ~ 51417110 (-)
LOC110491241 LOC106560679 other downstream 3159178 51039870 ~ 51050197 (-)
G159890 LOC106562215 other upstream 517343 54728299 ~ 54728860 (-)
LOC110491905 ppip5k1 other upstream 1724715 55935649 ~ 56006747 (-)
G161823 NA other upstream 2090399 56301355 ~ 56302095 (-)
G162657 NA other upstream 2616340 56827296 ~ 56830576 (-)

Expression


Co-expression Network