fem1b (fem1b)


Basic Information

Item Value
gene id fem1b
gene name fem1b
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54458665 ~ 54462837 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565541.2
TCCGTGACCCGGAAGTACCTTTTTTTTAGTGTTGCTGACGAGACGTTGATAGCCTTGCTCTGTTctcaaaacatttacatttgttggCTAATATAGCCGAATGCATTCTTCTTTGACCTTGCCTGCTTTAACGTGTTTAAAGGGGAGTACTGTAATTCAAGAGAAGCGAGATTTAACAGCACGAAGTTCTGATACTTGCACGGTTTTGAATGtgagcttgctagctagctatcttcagatgatgcattagctagctagctcggtGCCACCGAAATTGGGGACAACAAAGTTGATAATCGAATCCAGAAGTTAGCCCAAACAAACAATACGAATTAGTTTGGATGCAGCTTGTTTTGTGCTTTGAAATAATGGGTTTCAGTCAAACGAATTACTGTATCAACCAAGCTCAATTGAGTTTTTCATGTGAGCACTGAATAACCTTGTTTCGGTATTTTAATGGGAGGCGGGCTGCGTTGGAGTAGTACATCTAGTGGGCGACACTTGCGAAGAAGGCGAAGGTGCCGGCGACGTGCTGGGCTTGGATGGACTCGCTTGCCGGGTACGTATACAAAGCGGCTGCTGAGGGCCGAGTCCTGACGTTGGCCGCCCTGCTGCTCAACCACTCCGAGGCTGAGACACGATATTTACTCAGTTACGTGACCCACCTCGCTGGCCAACGGTCAACTCCTCTCATCATTGCATCTCGAAACGGACACGACAAAGTTGTGAGGCTGCTGCTGGATCACTACAAGGTGGATACTGAACAGACTGGCACAGTCAGATTTGACGGGTATGTCATTGATGGGGCCACCGCCTTGTGGTGTTCGGCTGGCGCAGGACACTTTGAGGTGGTCCGCCAGTTGGTGTGCCACCAGGCGAATGTCAACCACACCACTGTCACCAACTCCACCCCCCTGAGAGCGGCCTGCTTTGACGGGCGCCTGGACATTGTGAAATACCTGGTGGAACACCAGGCCAACATCGGCATCGCCAACAAGTATGATAACACCTGCCTGATGATCGCCGCCTACAAGGGCCACACGGACGTGGTGGGCTTTCTGCTGGAGCATGGCGCTGACCCCAATGCCAAGGCCCACTGCGGGGCCACAGCCCTGCACTTTGCTGCTGAGGCAGGCCACCTGGACATCGTGAAGGAGCTGGTGCGCTGCCAGGCAGCCATGGTGGTGAACGGCCATGGCATGACACCGCTCAAAGTGGCGGCGGAGAGCTGCAAGGCGGACGTGGTGGAGTTGCTGCTGTTGCACGCCGAGTGTGACCCACACAGCCGCATCGAGGCTCTGGAGCTCCTGGGTGCCTCGTTCGCCAACGACCGGGAGAACTATGACATCCTCAAGacctaccactacctctacctggccatgctGGAGCGCCACCGCGATCTCGGCGCGCTCATCGCCAAGGAGCTGCTGCCACCCATCGAGGCCTACGGCGGTAGGGGCGAGTGCCGCACCCCGCAGGAGCTGGAGGCCATCCGGGCGGACCGCAATGCGCTGCACATGGAGGGTCTGATGGTGCGCGAGCGCATCCTGGGCTCGGACAACATCGACGTGTCACACCCTATCATCTACCGGGGTGCCGTGTATGCCGACAACATGGAGTTCGACCAGTGCATCAAGCTGTGGCTGCACGCGCTGCTCCTGCGCCAGAAGGGCAACCGCAACACTCACAAGGACCTGCTGCGCTTCGCCCAGGTCTTTTCGCAGATGGTGCACCTGAAGGAGCCGGTGGGGGCGGAGCCAGTGAAGCAGGTGCTGCACTGCAGCGTGCTGGAGATCCAGAGGAGCATGGCCAGGGTGGAAGCAGCGCCTGAGGCCGAGCTTCACACGGCCATGGACAACTACGAGTCCAACGTGTTCACCTTTCTTTACCTGGTGTGCATCAGCACCAAGACAGTGTGTGGTGAGGAGGAGCGCGCCCGCATCAACAAGCAGATCTACAACCTGATCCAGCTGGACCCGCGCTCGCGGGAGGGCTCGTCCCTCTTGCACCTGGCCATCAGCTCCAGCACTCCAGTGGACGACTTCCACACCAACGATGTGTGCACCTTTCCCAACGCGCAGGTAACCAAGCTGCTGCTGGACTGCGGCGCGCAGGTGAACGCGGTGGACCACGAGGGCAACAGTCCGCTGCACATCATTGTGCAGTACAACCGGCCCATCAGCGACTTCCTGACGCTGCACGCCATCATCATCAGCCTGGTGGAAGCGGGCGCCCACACTGACATGACCAACAAGCAAAAGAAGACGCCACTGGACAAGAGCACCACGGGAGTGTCGGAGATCCTGCTCAAGACCCAGATGAAGATGAGCCTCAAGTGCCTGGCGTCGCGGGCCGTTCGCCAGCACCAAATCACATACCGCAACCAGATCCCTAAGACTCTGGAGGAGTTTGTGGAGTTCCACTGATCCACCTGGCCATGGAGACCTTTTAAACAATTAGAATCTCTTGTTCTTTTTTTGTTTTATAATTTTCTAACAAATCAGAACAGTGCTGGCTGGGGATGATTATGAACAGTTTGACACATTGTGGTTTTTAACAATGGTTCCCTTTTTTTCTATTATAAGTATGAATTGCGAGTACCAGCAGGAGCGCCCATGTTCTCGTTCTCCAGATCTCTTACTGAAGTGTGTTACTGTCTGTGGTTGTCATTCTGACTACTGGGTGTCACCAGCAGAATGAGGAAATTGACAGCCTGCTTTGTGCTTTCACTTTCCCAGAGTGTTCCAAAGAGAATACTTGGCACAGCCAAGCATCCACACAATGGTGACAACAGCAGGACCATTTGACAGCTTGTACTGCATGGATCCAATTGTCCCAGACATCCAGCTGGGTTCGCAACCATGAAAAGTAACATTACACTCTTGATTCTTTTTGCCTTATCATGTTTGCCTGTTGCAGGGATGCTGTGTGCCATGTTGCAATGATTATTGGGGTCAGTGTTTTTTTGGTGTGTGTTTGAGGGAGCGAATGCGTGTCAGTCAGAAAAAGGCTGGGAGGTGAGACGGTAGTAGTTAGTCTTGGCGATAGAGAATAAGCAAGAAATGCACGGCTTTGCCAAGCAGCCAGTCAAACTTGTGTGTTAGACAGTGACGCAGAGATCTTGTGGGACTTTCTTTTATTTCAGTCACCCATTGCTCTTTAAAGTTTTCACGGTTCCACTGATGTCTACATTTTAGACAGTGGTTTGCCTTGTGATTCTCATTTCTAGTTGGATTGTCTGCCTATGTTTGGTTCCAAACTCATGACTGGTGATTGAGTATTGCATTATAATAACAGATCGTTTCAGATTTCTCTAGAAGAACAGCGAGCCAACCcacacagtacagagagagagagagaactgctggACAGCACTTTATACTTATAATAGGAgtattttatttttctttcataactgatatttaaaaaaaactaaaaatcaAAAGAAGTTTTATTTAAGAGGGTATGTTTGAAGATATATTTTTATGGAAAAAACATCTGTGGAAGTAGATGTAAAAGGAGCTTTCTTTTACACAAACACTGACTGGTAAAGATGTGCCTGTGATTCTATTTAGATTTTCTCTATCGGAGTAATTAGGCGTAGATGTCCCCTTTTAACCAAGTCACCAACGCATGTGGGTTGTTGGCCATCCTGATGAGCTTTACTACAGTGTGAGGGAACGAGCTTGGCGGCTGTCTGTGGAGACTCCATGGCTTTGGCTGAGTATGACCACATACGGGCCTTTAAATGGATGCTGCTGGTATTGATGTTTGAGCATGTCTTCCATTCTACGTCTCTTGGATTTGTGTGTGGGTGCGCATGCTGAGATCGAGGGAAGGACTGTGGAATGTTCCTGGCGGGGTTGAATGTAGGCCTATAATCTTTTCCCTCATGCTTGTAACATGTCGTTTGTCCATGATAGCCAACGATTTGTACTGTCCGTCCCTGTTCTGTTTCCCAATCAGATGGTCAGAGATTAAAGCTGAGAATGAAAGGTGA

Function

symbol description
fem1b Predicted to be active in nucleus. Orthologous to human FEM1B (fem-1 homolog B).

NR:

description
protein fem-1 homolog B

GO: NA

KEGG:

id description
K10349 FEM1B; Fem-1 homolog b

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565541.2 True 4000 mRNA 0.51 2 54458665 54462837

Neighbor

gene id symbol gene type direction distance location
coro2bb coro2b coding downstream 118830 54303365 ~ 54339835 (-)
nox5 nox5 coding downstream 159719 54281716 ~ 54298946 (-)
ambra1b LOC106560763 coding downstream 190271 54213602 ~ 54268394 (-)
chrm4b LOC106560739 coding downstream 247709 54209058 ~ 54210956 (-)
phf21ab LOC106560766 coding downstream 400509 53996094 ~ 54058156 (-)
LOC110491804 LOC106560756 coding upstream 58305 54510925 ~ 54525000 (-)
ciao2a fam96a coding upstream 384755 54847592 ~ 54852144 (-)
si:ch211-284k5.2 LOC106560792 coding upstream 516080 54978917 ~ 55001034 (-)
LOC110491875 NA coding upstream 1213212 55676049 ~ 55698528 (-)
mpi LOC106560745 coding upstream 1364919 55827756 ~ 55840888 (-)
G159425 NA non-coding downstream 99957 54358472 ~ 54358708 (-)
G159418 NA non-coding downstream 104169 54354275 ~ 54354496 (-)
G159408 NA non-coding downstream 113813 54344613 ~ 54344852 (-)
G159353 NA non-coding downstream 156895 54301555 ~ 54301770 (-)
G159589 NA non-coding upstream 6480 54469317 ~ 54469653 (-)
G159591 NA non-coding upstream 7533 54470370 ~ 54470688 (-)
G159592 NA non-coding upstream 8124 54470961 ~ 54471212 (-)
G159604 NA non-coding upstream 25796 54488633 ~ 54488987 (-)
G159605 NA non-coding upstream 27724 54490561 ~ 54490815 (-)
cd59 cd59-2 other downstream 487326 53969443 ~ 53971367 (-)
G159120 NA other downstream 601113 53856686 ~ 53857552 (-)
snx33 snx33 other downstream 1346374 53032902 ~ 53112547 (-)
G155610 NA other downstream 3041555 51412269 ~ 51417110 (-)
G159890 LOC106562215 other upstream 265462 54728299 ~ 54728860 (-)
LOC110491905 ppip5k1 other upstream 1472834 55935649 ~ 56006747 (-)
G161823 NA other upstream 1838518 56301355 ~ 56302095 (-)
G162657 NA other upstream 2364459 56827296 ~ 56830576 (-)
G162745 NA other upstream 2651730 57114567 ~ 57117150 (-)

Expression


Co-expression Network