calml4b (calml4)


Basic Information

Item Value
gene id calml4b
gene name calml4
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 54491725 ~ 54504596 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565562.2
TGTAACCAAACAATATAAACGGTAAAAGTTTAAAACTATATAAAAACGTGATGCTATTCTGCATCCATAGCTTCTTCCAGTTACGAATTTGAGAGTAACGTTAGTAGGCTGGGCTACATTTATCCAGCCCTACAGCAAACCAAGTGGTGGGTCTTTCGGCGAATACATAAATTAAGGATTGTGCCTTTATTGTGACAGACCGTTTCATGGTGATCGGAGATAAATAACATAGTAACCTATAATTTGGTGTGGGGTCTAGTTCACCATGTGCTCATGGCAACACTGTATCAATAATGCAAACTTCAAAATAAAGGTTACTCACGCAGGTTTAACAAGCGGACCTGACACGTCGAGTGTGTCTAGGAGCACTGACTGAGCGTAACCACGATGGCAAAGTTCCTGACTCAAGACCAAATAAATGATAAGTGTGGAGAGCTGGACTTCTCCACCTTCCTAACTATGATGCACCAGCAGATCCAGCAGGAGGACCCCAGAGCAGAGATTCTGGAGGCCATGAGGATGACAGACAAGCAGAAGAAGGGCTACATCCTGTCCTCGGAGCTCCGGGCCAAGCTCACCGGGCTGGGAGAGAAGCTCACTGATAAAGAAGTTGACGAGCTGCTGAAAGAGACTGGCGTGGGACCAGACGGATGTGTCCACTACGAGGAGTTTGCCAAAACAATGACCCTTCCTTCTACAAACTGCTGAGCAGCCATCCGATCATACTGTACCACAAAGGTGCACTGATTCAAAGCATCTGCATGCTGGCTGCCCACTAACAACATGTTGAGATGAgaagtttttttattttctttattagCTTTCTGAGGTATGTGTTTCTATAGTTATTACGGTTTCCTTATATTTCTATTATGTATCCCTTATATAGATTTGTATGTTGAAGGAAGCAATGGTGTGCCTGGTTGAAATGTCTGCACTTTAAATATATAGCTAATACTAACTGGCATTGTTATAGCTTATCACTATTACCAAGTAATCACTAAAAAGCCTACTGACATTTTCACAAAGTAATGACATTGTTCTTATTGATATAAAGAGCAACTTGATTTCTTGATAATAAATGGACAAATCATTTTGGGTCCAAACTTGCTGTAAAA
>XM_021565556.2
GTAAAAGTTTAAAACTATATAAAAACGTGATGCTATTCTGCATCCATAGCTTCTTCCAGTTACGAATTTGAGAGTAACGTTAGTAGGCTGGGCTACATTTATCCAGCCCTACAGCAAACCAAGTGGTGGGTCTTTCGGCGAATACATAAATTAAGGATTGTGCCTTTATTGTGACAGACCGTTTCATGGTGATCGGAGATAAATAACATAGTAACCTATAATTTGGTGTGGGGTCTAGTTCACCATGTGCTCATGGCAACACTGTATCAATAATGCAAACTTCAAAATAAAGGTTACTCACGCAGGTTTAACAAGCGGACCTGACACGTCGAGTGTGTCTAGGAGCACTGACTGAGCGTAACCACGATGGCAAAGTTCCTGACTCAAGACCAAATAAATGAATTCAAGGAATGCTTTTCACTCTATGACAAGAAGCACAAGGGTAAAATTGAGGCCAAGGACCTGATTATAGTCATGCGCTGCCTGGGGGTCAGCCCCACTTTCATTGAGGTGGACAGACACCTGCAAATCTCCAAGATTGATAAGTGTGGAGAGCTGGACTTCTCCACCTTCCTAACTATGATGCACCAGCAGATCCAGCAGGAGGACCCCAGAGCAGAGATTCTGGAGGCCATGAGGATGACAGACAAGCAGAAGAAGGGCTACATCCTGTCCTCGGAGCTCCGGGCCAAGCTCACCGGGCTGGGAGAGAAGCTCACTGATAAAGAAGTTGACGAGCTGCTGAAAGAGACTGGCGTGGGACCAGACGGATGTGTCCACTACGAGGAGTTTGCCAAAACAATGACCCTTCCTTCTACAAACTGCTGAGCAGCCATCCGATCATACTGTACCACAAAGGTGCACTGATTCAAAGCATCTGCATGCTGGCTGCCCACTAACAACATGTTGAGATGAgaagtttttttattttctttattagCTTTCTGAGGTATGTGTTTCTATAGTTATTACGGTTTCCTTATATTTCTATTATGTATCCCTTATATAGATTTGTATGTTGAAGGAAGCAATGGTGTGCCTGGTTGAAATGTCTGCACTTTAAATATATAGCTAATACTAACTGGCATTGTTATAGCTTATCACTATTACCAAGTAATCACTAAAAAGCCTACTGACATTTTCACAAAGTAATGACATTGTTCTTATTGATATAAAGAGCAACTTGATTTCTTGATAATAAATGGACAAATCATTTTGGGTCCAAACTTGCTGTAAAA

Function

symbol description
calml4 Predicted to enable calcium ion binding activity and enzyme regulator activity. Predicted to be involved in regulation of catalytic activity.

NR:

description
calmodulin-like protein 4 isoform X1

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565562.2 False 1118 mRNA 0.41 4 54491725 54504596
XM_021565556.2 True 1238 mRNA 0.42 5 54491746 54504596

Neighbor

gene id symbol gene type direction distance location
cln6b cln6 coding upstream 4816 54474023 ~ 54486909 (+)
itga11b itga11 coding upstream 35771 54364918 ~ 54455954 (+)
dgkzb LOC106560764 coding upstream 300138 54100767 ~ 54191587 (+)
kcnj11l irk11 coding upstream 522562 53941853 ~ 53969163 (+)
bbs4 LOC106560769 coding upstream 564902 53905934 ~ 53926823 (+)
spg11 spg11 coding downstream 348216 54852812 ~ 54944780 (+)
LOC110491832 LOC106560753 coding downstream 447305 54951901 ~ 54976149 (+)
LOC118940499 NA coding downstream 495843 55000439 ~ 55024185 (+)
znf609a LOC106560750 coding downstream 736804 55241400 ~ 55426308 (+)
LOC110491849 LOC106560749 coding downstream 973951 55478547 ~ 55535685 (+)
G159466 NA non-coding upstream 2318 54488779 ~ 54489407 (+)
G159417 NA non-coding upstream 137394 54354056 ~ 54354331 (+)
G159412 NA non-coding upstream 140003 54346852 ~ 54351722 (+)
G159407 NA non-coding upstream 147350 54344009 ~ 54344375 (+)
G159405 NA non-coding upstream 147777 54343670 ~ 54343948 (+)
G159507 NA non-coding downstream 26189 54530785 ~ 54530990 (+)
G159697 NA non-coding downstream 89664 54594260 ~ 54594503 (+)
G159896 NA non-coding downstream 231204 54735800 ~ 54736001 (+)
G159923 NA non-coding downstream 247571 54752167 ~ 54752497 (+)
G159940 NA non-coding downstream 256735 54761331 ~ 54761557 (+)
G159415 NA other upstream 138337 54352983 ~ 54353388 (+)
G158778 LOC106560766 other upstream 469821 54021608 ~ 54021904 (+)
G156000 LOC106560791 other upstream 2667543 51816510 ~ 51824182 (+)
G155541 NA other upstream 3070603 51420847 ~ 51421122 (+)
rl28 rl28 other upstream 3074607 51412121 ~ 51417154 (+)
G159889 LOC106562215 other downstream 223700 54728296 ~ 54728860 (+)
G160569 NA other downstream 1441547 55946143 ~ 55947245 (+)
G161687 NA other downstream 1740448 56245044 ~ 56252598 (+)
G162130 NA other downstream 2543718 57048314 ~ 57053642 (+)
G163513 LOC106561046 other downstream 3423554 57928150 ~ 57931991 (+)

Expression


Co-expression Network