mpi (LOC106560745)


Basic Information

Item Value
gene id mpi
gene name LOC106560745
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 55827756 ~ 55840888 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021565703.2
aacgcggcatagGATGAGCCCATGGCCATATAAAGACGTCAGAACTACAGTGATAGCCGACGTTGCAGCCATGGAGGAAGTAAGAGTATTCCCGCTATCCTGTGCAGTGCAGAACTATGCATGGGGGAAGGTCGGTCTGGACAGTGAGGTGGCCAAACTGGTTGTTGGTGGGGATACCTCGGCTGTCATTGAAGCTGACAAACATTATGCCGAGCTTTGGATGGGTGCTCACCCCAAAGGAGACGCCCTCATCAAGGACAACCGGATAGCCCAGAGGACGCTCGGTCAGTGGATTGCAGACTACCCAGCATGCTTGGGGTCAAAGGTCAAAGACACCTTCCAGGGCCAGCTTCCCTTCCTCTTCAAGGTCCTGTCGGTCAACACCGCTCTGTCAATACAGGCCCATCCGAACAGGGAGTTGGCTGGACGGCTCCATGCTCAGTTTCCAGAGCATTACCCTGACAACAACCACAAACCTGAGATGGCCGTCGCACTCACCCATTTTGAAGGCCTCTGTGGCTTCAGGCCCGTGGAAGAGATCATTGGCTTTCTCAAATCCGTGCCAGAATTCCACGCTCTTGTAGGGAGTGAGACGGCAGAGGAGCTGGTGAGCAGTAGAGGGGAGGCGGGTCGCACCTCGCTGGCCCTGAAGAAGTGCTTCACCCGCATGATGAACTGTGAGAAGAAAGTGTTTGTGGACCAGCTGAACATGCTGGTGAAAAGAGTCACTGAGGAAGCTGCTGCAGGGAAGGACACATCAGACAGTAACAGTGAACTGTTGCTCCGGCTCCACTCCCAGTATCCGGGTGACATCGGCTGTTTTTCCATCTACTTCCTAAACCGCATTGTGCTGGAGCCAGGCGACGCCATGTTTCTGGGTGCCAATGAACCGCACGCGTACCTCAATGGAGACTGCATCGAGTGCATGGCCTGCTCAGACAACACGGTGCGCGCCGGCCTGACGCCCAAGTTCATCGACGTCAACACCCTGTGTGAGATGCTGAACTACAGCCCCGCTCCAGCCAGCGCCAAGATCTTCCCCTCCATACAGGACCCCTCAGACCCCTTTGTCTACCTCTATGACCCCCCTGTTCCTGACTTCACTGTCATGAGGATACAGgtGCCAGACTCAGTCAGGCAGTACACGGTGGCCCCGGTGGACTGTGCGGGCATCCTGCTGGTGATTGAGGGCGAGGCCACCGGCACCTCCGCCGCTGCCCTCTCTGACATCACCCTGAGCCGGGGCACTGTCCTCTTCATCTCAGCCAATGAGAGCGTCTCCCTTCACATCACCTCCCCCTCCGGAATGACTATGTACCGGGCCTGCAGTCTCCTGTAGCCCCAGGCCTTCTGATAATGTCACCTACCAACATCAACCCAACCCGTGGTTCTCCCATTCGTCATGCCGGGGTGTCCCCTGACATAAGGCCAGTAGTGATAGACTGAAGATGGCCTACTAACAGTTTTAACCCCTCTTTAACTGTAGTCTATGTGCAGTTCCATTCATTTTTCTCAGACAATCGCCCTGACAGGTACAGGAACATgcacagcttgtgtgtgtgtgatacacgCCCTTGTGGTTTGTGTACTCGCTGTGGTCCTTTTTATTCGGCCCATGTTTCTGTGAAGGTTTACACAGTATCGGTGATTATGGAGTTTTCATTGGTACAGTATGCCTCAGCTCACATCTCGCTGTAAGTGTCACATACTCTGTCGTTGCTGATGGTTTTTTTAATTGAGCATGTTGTAATTAATTACCTCTaagctttttttttttcagtGGGGGAAATCTTCTGTTCAATAGTAGTGCTTTTAAGACAATGCATCATAACAAAAACAGAGTATTTTAAATATATCAGCTGTATTGGGAACATTTGGCGTTTTACAGTATGCTGAGATTCCTGTGCATGTTTGCGGAACAAAGGCACCTGCCCATTCACGCATGCATATTTGCGCGCCGCATACATAGTGTACTTACAACTAGAGCATAGAGTAAGAATGTATAGCTACTGTATGGGGAGGCCTTTTCTTCAGCTGGATCACCAACATTGAAGTTGGTTTAGTTGAAGAAAATGTATGCTGTAAGGCTTAAGCATCATGTGACCATGCAATTCAACAGAAATGCATTCAGCAGTAGTCTGGACTGAAGGTGAGCTGTACTGTGTCAATGGTAACACCTCACACTCTATTACAGGATACAAAGTTGGTGTTTGAGAGGGACTGCATTGCAGTTGGTGACTGTAGACTGCCGACTCATCTTGCatcctaaatgactactgattATAACTTGTATAGCAGACAGTCTGTAGTCGCAGACTGCAATGTAGTCTCTCAAACACTCAAAATAGCTTTCCCCAAAGGTCAAAAAAGTGAAATTTTGTATGTTTGTTCATTCATTTTGAATGAAGCTCTGTTGGGTCAGGCATGTCTCCTGGTTGGTGTTCATTAGAGCACATCGTAGCAAAAGGAAAATTAGTTTCTTATTGGAGAAGTACTGATTGTACCTCCCCGTTTCTGTTTTGTGCTTAATGAGCATGACCCTGGTGCTTTCAATTGAACAGCGATGATCTACTTACGATTTGTGAATGAAGGACGGGAACAGAACGATAACTTAAATAATTTGTTCTGAACTTGTTTGTATGCCAACTGGTGTTGTCCAGGATATTTTAAATTACATGAACGGTTTGCACtacaatagtttaaaaaaaatatatatatatattatatatatatatactagttTGCAATCAAACCTACAGTagtaggtgtctgtgtgtgtatgtgtatgtatgtatgtatatatatatatatatatatatatacacagacacCTACTACTGTAGGTTTGATTGCAAACTAGTCTATGGGTTAAAGGTATAACGGTTTTACTTATTTTTCAATAGGAGCTGGAATGAGAGCATGGTTTTGCATTTGACTATACTACAGTAGCATGGCTCTCTAGAGTGTCTGTATGTAAACCTAAATAAAACATTCTGTACTAGTG

Function

NR:

description
mannose-6-phosphate isomerase

GO:

id name namespace
GO:0009298 GDP-mannose biosynthetic process biological_process
GO:0001889 liver development biological_process
GO:0090171 chondrocyte morphogenesis biological_process
GO:0005975 carbohydrate metabolic process biological_process
GO:0009790 embryo development biological_process
GO:0004476 mannose-6-phosphate isomerase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K01809 manA, MPI; mannose-6-phosphate isomerase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021565703.2 True 3004 mRNA 0.47 8 55827756 55840888

Neighbor

gene id symbol gene type direction distance location
LOC110491875 NA coding downstream 129228 55676049 ~ 55698528 (-)
si:ch211-284k5.2 LOC106560792 coding downstream 826722 54978917 ~ 55001034 (-)
ciao2a fam96a coding downstream 975612 54847592 ~ 54852144 (-)
LOC110491804 LOC106560756 coding downstream 1302756 54510925 ~ 54525000 (-)
fem1b fem1b coding downstream 1364919 54458665 ~ 54462837 (-)
LOC110491905 ppip5k1 coding upstream 94761 55935649 ~ 56006747 (-)
LOC110491965 LOC106561100 coding upstream 226659 56067547 ~ 56084173 (-)
LOC110491985 LOC106561098 coding upstream 250324 56091212 ~ 56136350 (-)
LOC110492010 LOC106561097 coding upstream 330657 56171545 ~ 56177565 (-)
LOC110492018 i20l1 coding upstream 352790 56193678 ~ 56197521 (-)
G161396 LOC106593556 non-coding downstream 8323 55815892 ~ 55819433 (-)
G161226 NA non-coding downstream 212039 55615374 ~ 55615717 (-)
G161178 NA non-coding downstream 278270 55548531 ~ 55549486 (-)
G161100 NA non-coding downstream 401585 55423239 ~ 55426171 (-)
G161411 NA non-coding upstream 17468 55858356 ~ 55858644 (-)
G161412 NA non-coding upstream 18010 55858898 ~ 55859175 (-)
G161484 NA non-coding upstream 176575 56017463 ~ 56017842 (-)
G161486 NA non-coding upstream 183081 56023969 ~ 56024170 (-)
G159890 LOC106562215 other downstream 1098896 54728299 ~ 54728860 (-)
ambra1b LOC106560763 other downstream 1559403 54213602 ~ 54268394 (-)
cd59 cd59-2 other downstream 1856417 53969443 ~ 53971367 (-)
G159120 NA other downstream 1970204 53856686 ~ 53857552 (-)
snx33 snx33 other downstream 2715465 53032902 ~ 53112547 (-)
G161823 NA other upstream 460467 56301355 ~ 56302095 (-)
G162657 NA other upstream 986408 56827296 ~ 56830576 (-)
G162745 NA other upstream 1273679 57114567 ~ 57117150 (-)
G162897 NA other upstream 1399391 57240279 ~ 57241372 (-)

Expression


Co-expression Network