XLOC_020652 (zgc:66156)


Basic Information

Item Value
gene id XLOC_020652
gene name zgc:66156
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 225937 ~ 237651 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040850
AGTAAACCGCAACCATGGGGGATGGAGAAATGGAGTGTTTCGGCCCGGCAGCCATTTACCTCCGGAAGCCAGAAAGAGAGAGAATAGAGGCCCAGAACACTCCCTTTGATGCCAAAACAGCGTACTTTGTGGTGGATGCAGACGAGATGTACCTGAAGGGTACTCTTCAGAGTAAAGAGGGTGGCAAAGCTACTGTCAAAACTCACAGTGGGAAAACCGTCACGGTAAAAGAAGATGAAATCTTCCCCATGAATCCTCCCAAGTTTGACAAAATTGAGGACATGGCCATGATGACCCACCTCAATGAGCCTGCTGTGTTGTATAACCTCAAAGAGCGTTACGCAGCATGGATGATCTATACCTACTCTGGCTTGTTCTGCGTCACTGTCAATCCATACAAATGGCTCCCAGTGTACGACTCAGTCGTTGTGACTGGATACAGAGGCAAGAAGAGGATTGAAGCCCCACCTCACATCTTCTCCATCTCTGACAACGCCTACCAGTTCATGCTCACTGACAGGGAGAATCAGTCTATCCTGATTACTGGAGAATCTGGTGCAGGAAAGACTGTCAACACCAAACGTGTCATTCAGTACTTTGCAACAATTGCTGTGTCTGGAGGAGCAAAGAAGCAAGAACCTGTCCCAGGCAAAATGCAGGGGTCACTGGAGGATCAAATCATTGCTGCAAACCCTCTGCTGGAGGCTTATGGTAATGCCAAGACTGTGAGGAATGACAACTCCTCTCGTTTTGGTAAATTCATCAGGATTCACTTTGCAACAACTGGAAAGCTGGCTTCAGCTGATATTGAAACTTATTTGCTGGAAAAGTCAAGAGTAACATTCCAGCTGTCTGCTGAGAGGAGTTACCACATCTTCTACCAGCTCATGACTGGACACAAGCCAGAGCTGCTGGAGGCCCTGCTCATCACCACCAACCCTTTTGACTATCCAATGATCAGCCAGGGTGAAGTCACTGTCAAGAGCATCAATGATGTGGAGGAGTTCATTGCCACAGATACTGCCATTGACATTCTGGGCTTCACTGCTGAAGAGAAAATCGCCATCTACAAGCTGACCGGTGCTGTGATGCATCATGGGGGCATGAAGTTCAAACAGAAGCAGAGAGAGGAGCAGGCTGAACCTGATGGCACTGAGGTGGCTGATAAAATCGCCTACCTCATGGGCCTCAACTCTGCTGACATGCTGAAAGCTCTGTGTTACCCCAGAGTGAAGGTCGGAAACGAGATGGTGACCAAAGGCCAGACAGTCCCGCAGGTGAACAACGCAGTGTCAGCTCTCTGCAAGTCTGTCTATGAGAAAATGTTCTTGTGGATGGTTGTTCGTATCAATGAGATGTTGGACACAAAGCAGCCCAGACAGTTCTTCATTGGTGTGCTGGACATTGCTGGATTTGAGATCTTTGATTTCAACAGCTTGGAGCAGCTTTGCATCAACTTCACAAATGAGAAACTGCAACAGTTCTTCAACCACCACATGTTTGTTCTGGAGCAAGAGGAGTACAAGAAAGAAGGCATCGAATGGGAGTTCATTGACTTCGGTATGGACTTGGCTGCCTGCATTGAGCTCATTGAGAAGCCAATGGGCATCTTCTCCATCCTTGAAGAGGATGAAGAAGAACCTGGAGGTGACTGTCAAAGACCTGCAGCACCGTCTGGATGAGGCAGAGAATCTGGCC

Function

symbol description
zgc:66156 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is expressed in cephalic musculature; myotome; pectoral fin musculature; and trunk musculature.

GO:

id name namespace
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-040426-1554 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Predicted to be part of myosin complex. Is expressed in cephalic musculature; myotome; pectoral fin musculature; and trunk musculature.

Ensembl:

ensembl_id ENSDARG00000095217

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040850 True 1698 mRNA 0.48 15 225937 237651

Neighbor

gene id symbol gene type direction distance location
XLOC_020651 ora1 coding downstream 16196 208644 ~ 209741 (-)
XLOC_020650 fbxo42 coding downstream 32703 191931 ~ 193234 (-)
XLOC_020649 slc25a34 coding downstream 37825 184670 ~ 188112 (-)
XLOC_020648 fblim1 coding downstream 60993 158112 ~ 164944 (-)
XLOC_020647 si:ch1073-335m2.2 coding downstream 70310 130967 ~ 155627 (-)
XLOC_020653 zgc:66156 coding upstream 16739 254390 ~ 263117 (-)
XLOC_020654 myhz1.1 coding upstream 30701 268352 ~ 278328 (-)
XLOC_020655 CABZ01079178.1 coding upstream 41139 278790 ~ 282498 (-)
XLOC_020656 CABZ01079179.1 coding upstream 53440 291091 ~ 294700 (-)
XLOC_020657 NA coding upstream 76059 313710 ~ 315380 (-)
XLOC_020646 NA non-coding downstream 124490 101082 ~ 101447 (-)
XLOC_020641 NA non-coding downstream 189821 27146 ~ 36116 (-)
XLOC_020664 NA non-coding upstream 154968 392619 ~ 395900 (-)
XLOC_020672 NA non-coding upstream 422266 659917 ~ 697504 (-)
XLOC_020673 NA non-coding upstream 462562 700213 ~ 704907 (-)
XLOC_020675 NA non-coding upstream 495593 733244 ~ 735244 (-)

Expression


Co-expression Network