zgc:113516 (eki1)


Basic Information

Item Value
gene id zgc:113516
gene name eki1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 57048311 ~ 57118294 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021566563.2
CCTCTCAATCTAGAACAGGTCTAGTTTAAGCACACAGAGAGATGAACGCTATAACCCCCAGATTTCCCCCTCAAGCCCTCTCAATCACTATTGTATCTCGGTTGGTGAGGACTCTGAGCAAAAAATATGAAACCAAAAATATACACTCTTGGTTCATAAAGACGAAGCTGTTCAGAAACGAGAGAAAAGTGTATATATAGACATCTCCGAGAAATTCTCAAAAAgTGTTCACAGAGGGCATCACCAACCAGCTGATGGGCTGCTTCGTGGGCTCACTCCAAGAGTCAGGGGCCGTGCTGGTGCGTGTGTACGGGAGGATGACAGAGCTCTATGTGGAccgggagagagaggtggagatgttCCAGATACTCCACTCTCACAACTGCGGCCCGCAGATCTACTGCAGCTTCCGGAACGGCATCTGCTACGAGTTTGTGAGGGGGACCGTGTTGGACGACACACTGCTCACACAGCCTGCCATCTATAGATTGATTGCGACAGAAATGGGAAAAATCCACTCGATCAAGCTTGAATCGGACAACCCTGTGGAGAATATTCTGTGGAAGAAGATGGCCCAGTTTCTCAAACTTGTCCATAATGCTCTGAGCAACACAACAGCACCACATAGTTCCAAGCTGCTGCAAGAGATCCCTAGCATCGAAACCCTGTCAGATGAAATGGAGACGCTGAAAAGACACCTCTCTCAGATCGGCTCGCCAACCGTGCTGTGTCACAACGACCTCCTGACTAAAAATATAATCTTCGACAACAAAGAGGGCATGGTGAGATTCATTGACTATGAGTATGCTGATTTTAACTACCAGGCCTTCGACATAGGCAACCATTTCAATGAGTTTGCAGGTACGAGTGACACTGACTACAGCCTGTATCCCAGACCTGAACTGCAGAGGGACTGGTTGACTGCTTACCTTGAGAGCTACAAGCACAGTGTGGGGCTGGAGGCCACAGTTACAGAACTAGAGGTTCAGAAGCTCTACGTTCAAGTCTGCAAGTTCTCACTGGCCTCCAACTTTTTATGGGGTCTCTGGGCAATCCTGCAGGCCAGATATTCCTCAATTGATTTTGACTTTGAAAGGTACGCCATAACCCGATTCGATTACTACTTTGAGAAGAAGGAAGAATACTTTGGATTGACTCTCAGTTAGAGAACCGAGCCCGAAGAAATTTAAACAGTTCAGGTCTGCTGCATTTTTATTTGAATTTAAGAGAGTATTTTTATCGACACATAATGCTGAAAGATTGAAAAAGAATGCGGGCAATATAACCATGTGTGTTTCCAGAAAATGTACACTTGATTGTTACAGTTTCCTAAAAAAGAATGGTGTAATTTCAACTGATTCTCCaaatatttgtttcatcacagTGAGGTTGGAGATAACCTCATTTGGCAAATTGACATGGCTTCCAGGCCAGAAAGATGTTCATTTACATTTTAGCCAAGTTACTCAAAGCAACAAGAACTAATACTAAAATCATGAGGGTTATTTCCAGGCTCATTCAACATTAAGCTCAGTTgaggttttttttttaaatgtcccctGGCATGGATTTTCAGTGTTGTATTATTTCAAGATGGTATTACCATCATGCTCTGTTTCAATTGTTTTGTTATAAGACAGCTCTCTTCTGTTGCCCAAAAGATGAATATTAGATAAATAAATTGTTCATACAATGTACATCGAACAgtacattgtacagtatatactgcagCATGCATAGGCAAGTGTTTTTGCTGAACTCCACTTCAGTGCATATCATAACAATTGCATACAAAGCATTTTAGAAATAAAGTGTTGCCTATCCATTT
>XM_021566546.2
CAGGCGGCCACACAAATTGTTAACATTTAGCCCATGTCTATAGTATGTTTTAGCTTTGGCTGTGACTAGTGTCTGTGAGTTTGATGGTTAATGTGTAACCCCCACAAACTAACTGAACCTGGATTCGTGGAGATGTGCTTTGATAAGCCAGCTGGTGTTGCATGCTGAGTCACTGGACACACGACTGGACAAATAGGTGACAAGTTAGCTCACATAATGACAGTTTGACTGGGCCCACACCACCGCAAGACAACGCTGTGTCTGAACACTGTCTGAAAAGCGCATGTTGGACTGAGAATATTTGGACATCACTTTTACATCACTTGGTTGAACGACACTCGGGACTTACTACTACTAGTTGGTCGGAACACCGCTCAACTTGTTCTAAATACTACTCCACTACACTATCTTGGTTGGACTACCACTCAACTTGGTCTGGCTACCGGTCAACGTGGTCTAAAAACGACTTAACCAGCTTGGGCCGACTTCCTCCGACCAAGTTTCAGACCCTGACCCATCTTGAGTAGTAACCCTGCTTCAGGGGGCCATGGAGGGTGGCTCTAAATGCACCAGGGGTCAGCTCCTGcacctggatgtgtgtgtggatgagcaGAAGCCTCGCGGCGGTGTCCTAGAGCTCCTCGGGAGACTAAGGCCCCAGTGGAAGCCACAGGACATCAAGATGAAGgTGTTCACAGAGGGCATCACCAACCAGCTGATGGGCTGCTTCGTGGGCTCACTCCAAGAGTCAGGGGCCGTGCTGGTGCGTGTGTACGGGAGGATGACAGAGCTCTATGTGGAccgggagagagaggtggagatgttCCAGATACTCCACTCTCACAACTGCGGCCCGCAGATCTACTGCAGCTTCCGGAACGGCATCTGCTACGAGTTTGTGAGGGGGACCGTGTTGGACGACACACTGCTCACACAGCCTGCCATCTATAGATTGATTGCGACAGAAATGGGAAAAATCCACTCGATCAAGCTTGAATCGGACAACCCTGTGGAGAATATTCTGTGGAAGAAGATGGCCCAGTTTCTCAAACTTGTCCATAATGCTCTGAGCAACACAACAGCACCACATAGTTCCAAGCTGCTGCAAGAGATCCCTAGCATCGAAACCCTGTCAGATGAAATGGAGACGCTGAAAAGACACCTCTCTCAGATCGGCTCGCCAACCGTGCTGTGTCACAACGACCTCCTGACTAAAAATATAATCTTCGACAACAAAGAGGGCATGGTGAGATTCATTGACTATGAGTATGCTGATTTTAACTACCAGGCCTTCGACATAGGCAACCATTTCAATGAGTTTGCAGGTACGAGTGACACTGACTACAGCCTGTATCCCAGACCTGAACTGCAGAGGGACTGGTTGACTGCTTACCTTGAGAGCTACAAGCACAGTGTGGGGCTGGAGGCCACAGTTACAGAACTAGAGGTTCAGAAGCTCTACGTTCAAGTCTGCAAGTTCTCACTGGCCTCCAACTTTTTATGGGGTCTCTGGGCAATCCTGCAGGCCAGATATTCCTCAATTGATTTTGACTTTGAAAGGTACGCCATAACCCGATTCGATTACTACTTTGAGAAGAAGGAAGAATACTTTGGATTGACTCTCAGTTAGAGAACCGAGCCCGAAGAAATTTAAACAGTTCAGGTCTGCTGCATTTTTATTTGAATTTAAGAGAGTATTTTTATCGACACATAATGCTGAAAGATTGAAAAAGAATGCGGGCAATATAACCATGTGTGTTTCCAGAAAATGTACACTTGATTGTTACAGTTTCCTAAAAAAGAATGGTGTAATTTCAACTGATTCTCCaaatatttgtttcatcacagTGAGGTTGGAGATAACCTCATTTGGCAAATTGACATGGCTTCCAGGCCAGAAAGATGTTCATTTACATTTTAGCCAAGTTACTCAAAGCAACAAGAACTAATACTAAAATCATGAGGGTTATTTCCAGGCTCATTCAACATTAAGCTCAGTTgaggttttttttttaaatgtcccctGGCATGGATTTTCAGTGTTGTATTATTTCAAGATGGTATTACCATCATGCTCTGTTTCAATTGTTTTGTTATAAGACAGCTCTCTTCTGTTGCCCAAAAGATGAATATTAGATAAATAAATTGTTCATACAATGTACATCGAACAgtacattgtacagtatatactgcagCATGCATAGGCAAGTGTTTTTGCTGAACTCCACTTCAGTGCATATCATAACAATTGCATACAAAGCATTTTAGAAATAAAGTGTTGCCTATCCATTT
>XM_036951362.1
cTCTAACAAAGCAATGGTAAATGGgTGTTCACAGAGGGCATCACCAACCAGCTGATGGGCTGCTTCGTGGGCTCACTCCAAGAGTCAGGGGCCGTGCTGGTGCGTGTGTACGGGAGGATGACAGAGCTCTATGTGGAccgggagagagaggtggagatgttCCAGATACTCCACTCTCACAACTGCGGCCCGCAGATCTACTGCAGCTTCCGGAACGGCATCTGCTACGAGTTTGTGAGGGGGACCGTGTTGGACGACACACTGCTCACACAGCCTGCCATCTATAGATTGATTGCGACAGAAATGGGAAAAATCCACTCGATCAAGCTTGAATCGGACAACCCTGTGGAGAATATTCTGTGGAAGAAGATGGCCCAGTTTCTCAAACTTGTCCATAATGCTCTGAGCAACACAACAGCACCACATAGTTCCAAGCTGCTGCAAGAGATCCCTAGCATCGAAACCCTGTCAGATGAAATGGAGACGCTGAAAAGACACCTCTCTCAGATCGGCTCGCCAACCGTGCTGTGTCACAACGACCTCCTGACTAAAAATATAATCTTCGACAACAAAGAGGGCATGGTGAGATTCATTGACTATGAGTATGCTGATTTTAACTACCAGGCCTTCGACATAGGCAACCATTTCAATGAGTTTGCAGGTACGAGTGACACTGACTACAGCCTGTATCCCAGACCTGAACTGCAGAGGGACTGGTTGACTGCTTACCTTGAGAGCTACAAGCACAGTGTGGGGCTGGAGGCCACAGTTACAGAACTAGAGGTTCAGAAGCTCTACGTTCAAGTCTGCAAGTTCTCACTGGCCTCCAACTTTTTATGGGGTCTCTGGGCAATCCTGCAGGCCAGATATTCCTCAATTGATTTTGACTTTGAAAGGTACGCCATAACCCGATTCGATTACTACTTTGAGAAGAAGGAAGAATACTTTGGATTGACTCTCAGTTAGAGAACCGAGCCCGAAGAAATTTAAACAGTTCAGGTCTGCTGCATTTTTATTTGAATTTAAGAGAGTATTTTTATCGACACATAATGCTGAAAGATTGAAAAAGAATGCGGGCAATATAACCATGTGTGTTTCCAGAAAATGTACACTTGATTGTTACAGTTTCCTAAAAAAGAATGGTGTAATTTCAACTGATTCTCCaaatatttgtttcatcacagTGAGGTTGGAGATAACCTCATTTGGCAAATTGACATGGCTTCCAGGCCAGAAAGATGTTCATTTACATTTTAGCCAAGTTACTCAAAGCAACAAGAACTAATACTAAAATCATGAGGGTTATTTCCAGGCTCATTCAACATTAAGCTCAGTTgaggttttttttttaaatgtcccctGGCATGGATTTTCAGTGTTGTATTATTTCAAGATGGTATTACCATCATGCTCTGTTTCAATTGTTTTGTTATAAGACAGCTCTCTTCTGTTGCCCAAAAGATGAATATTAGATAAATAAATTGTTCATACAATGTACATCGAACAgtacattgtacagtatatactgcagCATGCATAGGCAAGTGTTTTTGCTGAACTCCACTTCAGTGCATATCATAACAATTGCATACAAAGCATTTTAGAAATAAAGTGTTGCCTATCCATTT

Function

symbol description
eki1 Enables choline kinase activity and ethanolamine kinase activity. Involved in phosphatidylcholine biosynthetic process and phosphatidylethanolamine biosynthetic process. Located in cytoplasm. Human ortholog(s) of this gene implicated in intellectual disability; megaconial type congenital muscular dystrophy; muscular dystrophy; narcolepsy; and recurrent hypersomnia. Orthologous to several human genes including CHKA (choline kinase alpha) and CHKB (choline kinase beta).

NR:

description
ethanolamine kinase 1-like isoform X1

GO:

id name namespace
GO:0016310 phosphorylation biological_process
GO:0016301 kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021566563.2 False 1828 mRNA 0.43 8 57048311 57088772
XM_021566546.2 False 2292 mRNA 0.45 8 57048311 57089862
XM_036951362.1 True 1628 mRNA 0.43 8 57048311 57118294

Neighbor

gene id symbol gene type direction distance location
LOC118941077 NA coding downstream 11530 57034436 ~ 57039319 (-)
LOC118941078 NA coding downstream 76525 56968148 ~ 56971786 (-)
LOC110492408 smap coding downstream 209490 56835810 ~ 56838821 (-)
LOC110492166 LOC106561081 coding downstream 487524 56547837 ~ 56560787 (-)
LOC110492158 LOC106561083 coding downstream 506777 56527654 ~ 56541534 (-)
LOC110492288 LOC106561064 coding upstream 34624 57152918 ~ 57235251 (-)
LOC100135818 LOC100135818 coding upstream 126465 57244381 ~ 57250155 (-)
ric3b ric3 coding upstream 184466 57302760 ~ 57310851 (-)
c2h11orf16 cssa10h11orf16 coding upstream 213857 57332151 ~ 57340310 (-)
LOC110492469 NA coding upstream 477656 57583975 ~ 57601508 (-)
G162792 NA non-coding downstream 19495 57027999 ~ 57028816 (-)
G162791 NA non-coding downstream 20536 57027285 ~ 57027775 (-)
G162801 NA non-coding downstream 24837 57023176 ~ 57023474 (-)
G162798 NA non-coding downstream 33309 57014476 ~ 57015002 (-)
G162898 NA non-coding upstream 123465 57241759 ~ 57242011 (-)
G163113 NA non-coding upstream 135853 57254147 ~ 57256689 (-)
G163115 NA non-coding upstream 142379 57260673 ~ 57260883 (-)
G163127 NA non-coding upstream 159866 57278160 ~ 57278395 (-)
G163130 NA non-coding upstream 165166 57283460 ~ 57283742 (-)
G162657 NA other downstream 217735 56827296 ~ 56830576 (-)
G161823 NA other downstream 746216 56301355 ~ 56302095 (-)
LOC110491905 ppip5k1 other downstream 1104746 55935649 ~ 56006747 (-)
G159890 LOC106562215 other downstream 2319451 54728299 ~ 54728860 (-)
ambra1b LOC106560763 other downstream 2779958 54213602 ~ 54268394 (-)
G162897 NA other upstream 121985 57240279 ~ 57241372 (-)
G163839 LOC106561050 other upstream 658175 57776469 ~ 57789383 (-)

Expression


Co-expression Network