XLOC_020654 (myhz1.1)


Basic Information

Item Value
gene id XLOC_020654
gene name myhz1.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 268352 ~ 278328 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040852
GAGGCCCTGCTCATCACCACCAACCCTTATGACTATCCAATGATCAGCCAGGGTGAAATCACTGTCAAGAGCATCAATGATGTGGAGGAGTTCATTGCCACAGATACTGCCATTGACATTCTGGGCTTCACTGCTGATGAGAAAATCGCCATCTACAAGCTGACCGGTGCTGTGATGCATCATGGGAGCATGAAGTTCAAACAGAAGCAGAGAGAGGAGCAGGCTGAACCTGATGGCACTGAGGTGGCTGATAAAATCGCCTACCTCATGGGCCTCAACTCTGCTGACATGCTGAAAGCTCTGTGTTACCCCAGAGTGAAGGTCGGAAACGAGATGGTGACTAAAGGCCAGACAGTCCCGCAGGTGAACAACGCAGTGTCAGCTCTCTGCAAGTCTGTCTATGAGAAAATGTTCTTGTGGATGGTCATCCGTATCAATGAGATGTTGGACACAAAGCAGCCCAGACAGTTCTTCATTGGTGTGCTGGACATTGCTGGATTTGAGATCTTTGATTTCAACAGCTTGGAGCAGCTTTGCATCAACTTCACAAATGAGAAACTGCAACAGTTCTTCAACCACCACATGTTTGTTCTGGAGCAAGAGGAGTACAAGAAAGAAGGCATCGAATGGGAGTTCATTGACTTCGGTATGGACTTGGCTGCCTGCATTGAGCTCATTGAGAAGCCAATGGGCATCTTCTCCATCCTTGAAGAGGAGTGCATGTTCCCCAAGGCCACAGACACAAGCTTTAAAAACAAACTACATGACCAGCATCTGGGCAAATGTTCAGCTTTCCAGAAGCCCAAGCCTGCCAAAGGTAAGGCAGAGGCTCACTTCTCTCTAGTGCACTACGCCGGCACTGTGGACTACAACATTGTTGGCTGGCTGGATAAGAACAAGGATCCACTGAATGACTCTGTTGTGCAACTCTACCAAAAGTCTTCGCTCAAAGTGCTGGCCTTCCTGTATGCCTCTCATGGAGGTGAAGCTGAGGGTGGCGGCGGCAAGAAAGGAGGCAAGAAGAAGGGTGGTTCCTTCCAGACTGTGTCTGCACTGTTTAGGGAGAACTTGGGTAAGCTGATGACTAACCTGAGGAGCACTCACCCTCACTTTGTGCGCTGCTTGATTCCTAATGAGTCCAAGACTCCAGGTCTGATGGAGAACTTCCTGGTTATCCACCAGCTCAGGTGTAACGGTGTGCTGGAGGGTATCAGAATCTGCAGGAAGGGTTTCCCCAGCAGAATCCTCTACGGTGACTTCAAGCAGCGGTACAAAGTATTGAATGCTAGTGTCATTCCTGAGGGACAGTTCATCGACAACAAAAAGGCTTCAGAGAAGCTCTTGGGCTCTATTGATGTTGATCACACCCAATACAAGTTTGGACACACCAAGGTGTTCTTCAAAGCTGGTCTGCTGGGTACTCTTGAGGAGATGAGAGACGAAAAACTTGCCTCACTGGTTACCATGACTCAAGCTTTGTGCCGTGGATATGTCATGAGAAAGGAGTTTGTCAAAATGATGGAGAGGAGAGAAGCAATTTATTCCATCCAATACAACATCCGCTCATTCATGAATGTCAAACATTGGCCATGGATGAAGCTCTACTTCAAGATCAAGCCTCTTCTGAAGAGTGCAGAGACTGAGAAAGAAATGGCAGCCATGAAGGAGAATTATGAGAAAATGAAAGAAGATCTTACGAAGGCATTGGCTAAAAAGAAGGAGCTGGAGGAGAAAATGGTGTCACTTCTTCAGGAGAAAAATGACCTTCAACTACAAGTAGCATCTGAAGGTGAAAACCTCTCAGATGCTGAGGAGAGATGTGAAGGTCTCATCAAAAGCAAGATCCAGCTTGAGGCTAAACTCAAAGAGACAACCGAGAGGCTGGAAGATGAGGAGGAAATCAATGCTGAACTGACGGCCAAGAAGAGGAAGCTGGAGGACGAATGCTCCGAGCTGAAGAAAGACATTGATGACCTGGAGCTCACTTTAGCCAAAGTGGAGAAGGAGAAACATGCAACAGAAAATAAGGTGAAAAACCTGACAGAGGAGATGGCCTCTCAGGATGAGAGCATTGCCAAGCTGACCAAAGAGAAGAAAGCCCTCCAAGAGGCGCATCAGCAGACCCTTGATGACCTTCAGGCAGAGGAAGACAAAGTCAACACTCTGACTAAATCTAAGAGCAAGCTTGAGCAGCAAGTGGATGATCTTGAGGGCTCCCTGGAGCAAGAGAAGAAGCTCCGTATGGATCTTGAGAGAGCCAAGAGGAAGCTTGAGGGTGACCTGAAACTGGCCCAAGAGTCCATAATGGACCTGGAGAACGACAAGCAGCAATCcgaggagaagatcaagaaGAAAGACTTTGAGATAAGCCAGTTCCTCAGCAAGATTGAGGATGAACAGTCTTTGGGAGCACAGCTTCAGAAGAAGATCAAAGAACTTCAGGCCCGTATTGAGGAGCTGGAGGAGGAAATCGAGGCTGAACGAGCTGCTCGTGCTAAAGTGGAGAAGCAGAGAGCCGATCTCTCCAGGGAACTTGAAGAGATCAGTGAGAGGCTTGAGGAAGCTGGAGGTGCCACTGCTGCCCAGATTGAGATGAACAAGAAGCGTGAAGCAGAATTCCAGAAGCTGCGTCGTGATCTGGAAGAGTCCACCTTGCAGCATGAAGCTACGGCTGCAGCTCTCCGAAAGAAGCAGGCAGACAGTGTGGCTGAGCTCGGAGAACAGATCGACAACCTCCAGCGGGTCAAGCAGAAGCTGGAGAAGGAAAAGAGTGAATACAAGATGGAGATTGATGACTTGTCAAGCAACATGGAGGCTGTGGCTAAAGCAAAGGCTAATTTAGAGAAGATGTGCCGCACTCTTGAAGATCAGCTGAGTGAAATCAAGACCAAAAGTGATGAAAATATTCGCCAGTTGAATGACATGAATGCACAACGGGCAAGACTTCAGACTGAAAATGGTGAATTTAGCCGACAACTGGAAGAGAAAGAAGCACTTGTTTCACAGTTAACTAGAGGAAAACAGGCCTATACACAGCAAATTGAGGAGCTCAAGAGACATGTTGAGGAAGAAGTCAAAGCCAAGAACGCTTTGGCCCATGCGGTTCAGTCTGCCCGCCATGACTGTGATCTGCTCAGAGAGCAGTTTGAGGAAGAGCAAGAGGCCAAAGCTGAACTCCAGCGTGGAATGTCTAAGGCCAACAGTGAGGTGGCACAATGGAGAACCAAATATGAGACTGACGCCATCCAGCGTACAGAGGAGCTTGAGGAATCCAAgaAAAAGCTGGCTCAGCGTCTGCAGGATGCTGAAGAATCCATTGAGGCAGTGAACTCCAAGTGTGCATCGCTGGAGAAAACAAAACAGAGACTGCAGGGTGAAGTAGAGGACCTCATGATTGATGTGGAGAGAGCAAATGCATTGGCTGCTAACCTTGACAAGAAGCAGAGAAACTTTGACAAGGTCCTCGCAGAGTGGAAGCAGAAGTATGAGGAAGGCCAGGCTGAACTAGAAGGGGCTCAGAAAGAAGCTCGCTCTCTCAGCACTGAAATTTTCAAAATGAAGAACTCTTATGAAGAAGCCCTGGACCAGCTTGAGACCCTGAAGAGGGAGAACAAGAATCTGCAACaGGAGATTTCTGACCTCACTGAGCAGCTTGGAGAGACTGGAAAGAGCATTCATGAGTTAGAGAAAGCCAAGAAGACTGTGGAGTCTGAGAAAGTAGAGATCCAGACTGCACTTGAAGAAGCCGAGGGCACCCTGGAGCATGAGGAGTCCAAGATTCTGCGTGTGCAGCTGGAGCTGAACCAGGTGAAGAGTGAGATTGACAGGAAGCTTGCTGAGAAGGATGAAGAGATAGAACAGATCAAGAGGAACAGCCAAAGAGTGCTTGATGCCATGCagagcactctggactctgaggTCAGGAGCAGAAATGATGCCCTGAGAGTCAAAAAGAAGATGGAGGGAGATCTGAATGAGATGGAGATCCAGCTGAGTCATGCCAATCGCCAGGCTGCTGAAGCCCAGAAACAGCTCAGGAACGTTCAAGGCCAACTCaagGATGCCCAACTGCACCTTGATGAAGCCGTCAGAGGACAAGAGGACATGAAGGAGCAGGTGGCCATGGTGGAGCGCAGGAATAACCTGATGCAAGCAGAGATTGAGGAGCTGAGAGCCGCACTGGAGCAAACAGAGAGAGGCCGCAAAGTAGCAGAGCAGGAGCTGGTGGATGCCAGTGAGCGTGTGGGACTGCTGCACTCACAAAATACAAGTCTTATTAACACCAAGAAGAAGCTTGAGGCTGATCTGGTCCAAATTCAAGGTGAGGTGGATGATGCAGTTCAGGAGGCCAGAAACGCAGAGGAGAAGGCCAAGAAGGCCATCACTGATGCTGCCATGATGGCTGAGGAGCTGAAGAAGGAGCAGGACACCAGTGCTCACCTGGAGAGGATGAAGAAGAACCTGGAGGTGACTGTCAAAGACCTGCAGCACCGTCTGGATGAGGCAGAGAATCTGGCCATGAAGGGTGGAAAGAAACAGCTCCAGAAACTGGAGTCCAGGGTTCGTGAGTTGGAGAGTGAAGTTGAAGCTGAACAGAGACGCGGTGCAGATGCTGTTAAAGGAGTGCGTAAATATGAAAGGAGGGTGAAGGAGCTCACCTACCAGACCGAGGAAGACAAGAAGAACGTGACTCGCCTGCAGGATCTGGTGGACAAGCTGCAGCTGAAAGTGAAGGCCTACAAGCGCCAGGCTGAAGAAGCTGAGGAGCAGGCCAACACTCACCTGTCCAGGTACAGGAAGGTGCAGCATGAGATGGAGGAGGCTCAGGAGCGTGCTGACATCGCCGAGTCCCAGGTCAACAAGCTGAGAGCCAAGAGCCGCGATGCAGGAAAG

Function

symbol description
myhz1.1 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within somite specification. Predicted to be part of myosin complex. Is expressed in several structures, including adaxial cell; brain; eye; musculature system; and somite. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita; disease of cellular proliferation; and distal arthrogryposis (multiple). Orthologous to several human genes including MYH1 (myosin heavy chain 1) and MYH8 (myosin heavy chain 8).

GO:

id name namespace
GO:0001757 somite specification biological_process
GO:0016459 myosin complex cellular_component
GO:0005524 ATP binding molecular_function
GO:0000166 nucleotide binding molecular_function
GO:0051015 actin filament binding molecular_function
GO:0003774 motor activity molecular_function
GO:0003779 actin binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-000322-5 Predicted to enable ATP binding activity; actin filament binding activity; and cytoskeletal motor activity. Acts upstream of or within somite specification. Predicted to be part of myosin complex. Is expressed in several structures, including adaxial cell; brain; eye; musculature system; and somite. Human ortholog(s) of this gene implicated in arthrogryposis multiplex congenita; disease of cellular proliferation; and distal arthrogryposis (multiple). Orthologous to several human genes including MYH1 (myosin heavy chain 1) and MYH8 (myosin heavy chain 8).

Ensembl:

ensembl_id ENSDARG00000102414

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040852 True 4893 mRNA 0.49 30 268352 278328

Neighbor

gene id symbol gene type direction distance location
XLOC_020653 zgc:66156 coding downstream 5235 254390 ~ 263117 (-)
XLOC_020652 zgc:66156 coding downstream 30701 225937 ~ 237651 (-)
XLOC_020651 ora1 coding downstream 58611 208644 ~ 209741 (-)
XLOC_020650 fbxo42 coding downstream 75118 191931 ~ 193234 (-)
XLOC_020649 slc25a34 coding downstream 80240 184670 ~ 188112 (-)
XLOC_020655 CABZ01079178.1 coding upstream 462 278790 ~ 282498 (-)
XLOC_020656 CABZ01079179.1 coding upstream 12763 291091 ~ 294700 (-)
XLOC_020657 NA coding upstream 35382 313710 ~ 315380 (-)
XLOC_020658 necap2 coding upstream 63662 341990 ~ 347424 (-)
XLOC_020659 tmem240b coding upstream 70793 349121 ~ 354592 (-)
XLOC_020646 NA non-coding downstream 166905 101082 ~ 101447 (-)
XLOC_020641 NA non-coding downstream 232236 27146 ~ 36116 (-)
XLOC_020664 NA non-coding upstream 114291 392619 ~ 395900 (-)
XLOC_020672 NA non-coding upstream 381589 659917 ~ 697504 (-)
XLOC_020673 NA non-coding upstream 421885 700213 ~ 704907 (-)
XLOC_020675 NA non-coding upstream 454916 733244 ~ 735244 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000186_00873286_00934953 MMYHEMB1, MYHB, MYHM86-1 coding CI01000186 null 873131 ~ 934953 (-)