ric3b (ric3)


Basic Information

Item Value
gene id ric3b
gene name ric3
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 57302760 ~ 57310851 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951336.1
GTTACACTTCCGTTTTTCAGCGAAGGACGTGTGCACAAATGGATGATGCTGAGGAGCCCGACGCAGCATCCACTTGACCCTCTGTGTTGAATTGTTTGTGTATTCGTGTTGCCTTTTAAGTACATTTACCTGCAAAAGCAACCGTGCGGCTGTAACAATGTCGATGTCAACATTTCAAAAGGTTACGCTAGTGTCTTGTCTCGTGCTCTGCGTTGCTCTTCTGCTTCCGAAAATGCTGCTAGGCGGAGGGAAGGGTGCACAGACCGAGGGTTCAGGACGGTTTCCTCCCATGGTGCACCGGCAGATGGCTCCGGACAGTCAGGGCCAGAGTGCTGCTGGGTCCACCAGGGCACACAACACCGAGGCTATCGCCAGGGCTAAGGGGGGTGGGGGCACAGGGGTAGGAACCGGGGGCAAGTCCAACCTGGCAGGGCAGATCATCCCCATCTACGGCTTTGCGATCCTTCTTTACATCCTCTACATCCTGTTTAAGATAACCTCAAAGGGGAAGTGCGCTGTACCTTCTGAACCCAGatttccctcagtaagagcagaGAACCGGAAGAGAAAGATCAcgGACTTTGAGCTGACTCAGCTGCAGGATAagctgagggagacagagatggtgatggagaggaTTGTGTCCAAAGCCAGCTACAGTCCTGAAAGGGTGACAGGGGTGAGTGCCGACCAGGAGGAGAGACTGCTTCTCCAGCTGAGAGAGATCACGCGGGTGATGCAGGAGGGCCGCCTGGTGGAGGGGGTTGCCCCCACAGAGATGGGGGCACAACACTGGGAAGGTTTCCCAGAGGATCCCCATCCATGCTGGGAAGAGCCCTTCTGTGGATACGACCATACCCAGGCAACCAGCACAGAAGAGCAGCCAGAGAGGACCGACGAGTGTGGGGCTGACCAGGAGGGTGTGGCTTACCAGGAGAAGGGTGGGGCTTACCAGAAGGAGAGTGGGGCTTACCAGAAGGAGGGTGGGGCTTACCAGAAGGAAGGTGGGGCTGACCAGGAAGAGGGTGTGGCAAACAAGGAGAGTGGGGTTGACCAGGAAGAGGGCAGGGCTGACCAGAAAGACGTTGGGCTTAACCAGGAAGAGAGCGTAGTTGACCAGGAGGTGGTTGGGGTTGACCAGGATGAGGGCAGGGCTGACCAGAAAGACATTGGGCTTAACCAGGAAGAGAGCGTAGTTGACCAGGTGGTGGTTGGGGTTGACCAGGAAGAGGGCAGGGCTGACCAGAAAGACATTGGGCTTAACCAGGAAGAGAGCGTAGTTGACCAGGAGGTGGTTGGGATTGACCAGGAAGAGGGCAGGGCTGACCAGAAAGAAGGTGGGCTTGACCAGGAAGAGAGCGTAGTTGACCAGGAGGTGGTTAGAGTTGACCAAGAAGAGGGCAGGGCTGACCAGGAGGAGGGTGCGGCTGAGGATGATGTAGGTGTAGCTAAGGCAGGGGCTGATTTGAATACTGATGAGGAGGGATGTGCTGATTTGGCCACTGGGAATGAGGAATGTGGGGCTAAGCGTGATGTGGGTGGGACTGAGGTGGAGAAAGCAGGAATGGACAGGGAGGAGGGTGGGGCCAATGACAAGCTGGGTCTGGCTGATGAAGACAGGGGTGGTGCAGAGGAGGAGCTTGAGTTTACACTGAAGATGCCCACCATGTTGGAGCGAGAGGAAAAGGACGGTGTTAACCTGTCAACGGAGATGTCAACTAGCCGTTCTCGTGTTAGAAGGAAAAGGAACAAGAAGCAGAAGAAATGACCAAAAGAAAACAGAGTTGATTGACTTCCCCTAAATTCCTTCCTATAATTGGGAAAGTAGAGTGCGCCCCACAAACTTGAGTCTGGCTATGCCCGTCTAGCAACATTTCTTCCTAGCCTCCAATGCTTCCAAACAGGATGGGCCATAGCATGAAGGTTAGCAGTAGCCAGTCTATAAACATAGGATCAAAAAGCTCCACCTGAGAAAGATGGTATCTCTTCCTAAGTGACAGTCTGAAGCAGAAGTCATACCCACAGTATTGTACCAATGCTTTGTTCAGATGTTCACTATCGCATAATAGCTTTGGCACAATGCGCATTACAGTGAACTGAATGATTTGGAAGGCACTGTGCTCCTACAGTCTTGATTCACATCTGGGCTTGAGAGTATGCTTGTTGTCCTCTTAGTGCAATAAACCATAATTAGAATACATGGGAATGATCTTATTTCATGGGTATAAGTTATTGAAAAAGCATTCACTTTTATACACTATTTATTCACTACTGATGACTATATTTACCAGGAGCGTTATGTCAGCGTTACAAAAAAAGTAACTACTGTGGAATCTCACAAATAAAATATTCTGGTTTGACAACAA

Function

symbol description
ric3 Predicted to enable acetylcholine receptor binding activity and protein folding chaperone. Involved in positive regulation of protein localization to cell surface. Predicted to be located in Golgi membrane; endoplasmic reticulum membrane; and synapse. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle; neuron projection; and neuronal cell body.

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951336.1 True 2366 mRNA 0.51 6 57302760 57310851

Neighbor

gene id symbol gene type direction distance location
LOC100135818 LOC100135818 coding downstream 52605 57244381 ~ 57250155 (-)
LOC110492288 LOC106561064 coding downstream 67509 57152918 ~ 57235251 (-)
zgc:113516 eki1 coding downstream 184466 57048311 ~ 57118294 (-)
LOC118941077 NA coding downstream 265979 57034436 ~ 57039319 (-)
LOC118941078 NA coding downstream 330974 56968148 ~ 56971786 (-)
c2h11orf16 cssa10h11orf16 coding upstream 21300 57332151 ~ 57340310 (-)
LOC110492469 NA coding upstream 285099 57583975 ~ 57601508 (-)
LOC110492538 LOC106561048 coding upstream 486928 57797779 ~ 57886941 (-)
dusp8a LOC106561046 coding upstream 617272 57928123 ~ 57994689 (-)
LOC110492572 ptpn5 coding upstream 687454 57998305 ~ 58025998 (-)
G163131 NA non-coding downstream 18722 57283827 ~ 57284038 (-)
G163130 NA non-coding downstream 19018 57283460 ~ 57283742 (-)
G163127 NA non-coding downstream 24365 57278160 ~ 57278395 (-)
G163115 NA non-coding downstream 41877 57260673 ~ 57260883 (-)
G163113 NA non-coding downstream 46071 57254147 ~ 57256689 (-)
G163147 NA non-coding upstream 3964 57314815 ~ 57315157 (-)
G163104 rpl27a non-coding upstream 16969 57327820 ~ 57329185 (-)
G163163 NA non-coding upstream 135463 57446314 ~ 57449277 (-)
G163232 NA non-coding upstream 145742 57456593 ~ 57457164 (-)
G163277 NA non-coding upstream 221430 57532281 ~ 57532697 (-)
G162897 NA other downstream 61388 57240279 ~ 57241372 (-)
G162745 NA other downstream 185610 57114567 ~ 57117150 (-)
G162657 NA other downstream 472184 56827296 ~ 56830576 (-)
G161823 NA other downstream 1000665 56301355 ~ 56302095 (-)
G163839 LOC106561050 other upstream 465618 57776469 ~ 57789383 (-)
G164003 NA other upstream 800490 58111341 ~ 58118221 (-)
LOC110492612 LOC106561041 other upstream 818558 58118987 ~ 58200644 (-)

Expression


Co-expression Network