LOC110492265 (dennd5a)


Basic Information

Item Value
gene id LOC110492265
gene name dennd5a
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 57467108 ~ 57527083 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036951202.1
cacacacaatgaggtaGGCTGCCTCCTACACAACACAGTCATTTCGGGATGACACTAGTCTGACTGCCGACCGTGGACGGAGAACATACAGAAAGGACAATTTCATCCCGAAAAGAATACAAGGTGTTCGTTTGATTTAAAACGGAAATTATCCCACTGTCTAGACTACAGCGTGTCATAATTTGCCCTGCGTATAGGCTACAGGATGGAGGTCCAGAGTATGAAATAGAGACTAACCGAGTAGCATATCTAAACCGATGATGAGCGGGGTTACTTCGGGCACAGGGTCGGCTTCGTGCCGCTTCGCCCACTACTTCGTGGTGTGTGGATTGGACACGGAGACTGGTCTAGAACCCGAAGAATTAGCAGgTGAGAGCTTTGAGCAGAGCCCCCTACGGAGGTCCTTCAAATCCAAGGTTCTGGCCCACTACCCTGAGAGCACAGACAGGAGTCCCTTCAACAGAGATGCAGTCAACATGcTCTGCATGCCGCACGGCCTGTCGTTCCGTAGTCAGGCGGACGGCCGCGAGCACCACTTCCACTCCTTCACGGTCGCCCAGGACGACGGCACGCGCTCCTACGGCTTCGTGCACACGTACTACGAAGCGGTGACGAATGCCCAGATCACCACGGCGATGCAGACCCTTCATCAGATGCACCATGTGGAGCACTATTCCACCTCCTCTTCGTCATCTTCCTccgcctcctccccctccacatcCAGCATGGATTCTCTGGTGAGCAGCCTGGATGAGTTGGATGCCGACTCCCTGGCAGCGCGCCCAATGTCGGCTTGTTTGGGCTGCGCAGCGGGCTCCTTCCAGCCGGCCCGGGACACCCTGTATGCCTCCAAGGCCCTCTGCCTCCTCACGCCCCTCCCCTTCCTGCACGCCGCCCGCCACTTCCTGTCCCAGCTGCACCAGGCGGTGACATCGCACGCGGCCCCGCCACTGCCGCTGGAGAGCTACATCCACAACATCCTGTACGAGGTACCCGTGCCGCCGCCCGGTCGTTCGCTCCGGTTCCACGGGGTCCAGGGGCCTATCGTGTGCCAGCAGCCCGGCCCTGAGGAGCTCCCGCTCGGGGACTACCCACTAGGAGAGGCCTTCTCCCTGCTGGGGGTGGAGAACATGGTGAGGCTGCTCACCTCTGTGCTGCTGGAGACCCAGGTCCTGCTCTACTCACAGGactaCCAGCGGTTGATGACGGTGGCAGAGGGCATCACCAACCTACTGTTTCCATTCCAGTGGCAGCACGTCTACCTGCCCATCTTGCCCGTGCCCCTGCACCATCTCCTGGATGCCCCCGTGCCCTTCTTGATGGGCATCCAACGGAAGGATTGCTCCCAATGCTCCACTTTGGATCTGTCCCATGAGGCCAACCTGTGCTTTGTGGACATAGACAACCACCGCGTGGATCCACCCGAGGACCTGCCCCTCTTCCCAGACCAGCCCGAGCTCATCCTCGAGCTGAACGAGGTGCTGCTGCGTTTCGGCCTCCAGCCACATGGTGGCGCCACCACCACCAACCCCGCCCCTGCCGCTCCCCTCTGCCTCAGCAGCCTCGTCCTGGAGGACCTGATGGAAGACAGGCGCAATGGGAACCTTGGAGGGGAGGAGTTGGCCGTGCTGGAACGACTGCAGGCACTGGCCAGGAGGTGTggagaaggaggggtggaggggggaaaGACCCTTGGACGGGCgttccaggaggaggaggaggaactgaATGCGGCCAAAATGAACGTGCAGCTGAGGGAGGTGTTCGCAGGGCGTTTTGCCGTCATTTTCAGGAGGTACGAAGAGTTTGTGATCCACAGCGCTCCCGACCTGGAGTCCTGGCTAGGCAACCGTGACGGAACGAGCAACTTTGATAAGGGCTCCTTCCTGTCGGCGCAGCCTGCCCCGCACCTGCACTTCCTGTCCTGGTTCCTGGAGACGGCCATGTTCTCATCATTCTTGGACAGCAAGGTGTTGTCTCGCTGGGCCGACCAGGAGCCGCTGCAGCGTGTGTTCGACGGCCGCCTGGAGAGGGAGCACCTCTACGACACGTTCGAGGATGACCCCGGCAACCGTCGCTACAGGAAGTGCAGCGTGCTCCACAAGTCAGCCCAGGCCATGGAACGCAGGCTGCTGAAGGTTGACCACACGGCCATCCACCCCCACCTGTTGGACATGAGGATCGGCCAGGGTCGACACCAACAGGGCTGCTTCCCCAGGCTGCAGGCTGATGTACTGGCACAGGGACATAACACCAATAAGTGGTCAAGCCGTAACACTCGCAGGAGCGACATTAAGAGACCAGTGACCAATGACACGACATCAGGACTGGGCAATGACCAGAGAGAGAAGTATTCCCCGGGGAGGAGGAGCCTACACCAGTCCAAGCTTCTTGACCCCTCCCCCTCAGCTGTCACTCAAATCCAGCGGGGGTTCGTGGAGGGGCTCCTGAGTGAATGTCGCCTGAAGACCAGGCGTATGTTGATGGAGAGGATGGGGAAGGAGAGTgtggagctgggtcagggtgAGGCCAGCATCACAGGCCTGCAGGAGAACACACTGATCCACAGCCTCTGTGACCTGCTGGAGAGGACCTGGGGCCACGGGCTGCTGCTCAAACAGGGAAGGTCGGCTCTGTGGTCCCACCTGCTCCACTGCCAGGCCAATGGAGAGAAGATGGAGCCACCATCACCTGCCGAGTCTCCAGTGTCCAATGGGCTGGACAGCATGAGGCTAGAGGAGGGGCTTGCACCCCCGAAGGGCTCCTTTGTACAGGATATGAGGTTTGTCCAGACAATGAGTGAGGGTCTCAGTGAGGTGGGTCGGGCGCGGGCCTGGATCCATCTTTCCCTGGAGAAGAAAGTGCTCTCGCAACACCTCAAACTGCTGCTGGCCAACCAGAACCTAATCAGGCAGCTGTACAAGCCCCACGCGTTCCTActgtgtgaggaggagagggagcagtTCCTGTTCCACCTGCTGTCCCTCAACACTGTGGACTACCTCTGCTTCACACGCACATTCATCTCCATCAACATTCCATACCGTGTTGTCATAATGCCCATGAAGAAGCTGAGTATTGCCATGACAATGTCCAAcccctgggtgtgtgtgtctggagagcTGGGTGACTCTGGGGTCAGgcagatccccaagaacacacagGAGATCGTCTTCCAGtGCCAGAACCTGGGCAGGCTGAGCACCCTGCAGTTGGGGCAGGAGAACTCTGGCCTACTGGCTAAGTGTCTGGTGGACTGTGTGATTGTGCACAACGAGATCACTGGACACACCTACAGGTTCCCATGTGGCCGCTGGCTGGGGAAGGGTGTGGGTGACGGCAGCCTGGAGAGGGTGCTGATTGGTCAGCTGGTGTCtcccagaggagaggaggagtctgGGAGGTGGACGGGGACACCCCCGGAGCAGGGTTCACCCCCTCAGAGTGGACACATGGGGTCACTGGGGcgcagcaacagtaacaacaGACTGTCTTCTGTCCAGGTGCAGGAGGAAATGAGGGAGGCAGTAAACAACCTCGTCAAGCACTTCCACAAAGCAGAGCAGGAGaggGGGAACCTGACTGCTCTGCTGTGTGGagaggaggggctggtgcactccCTGGAACAGTTCCTCCTACATGGCTTCAAGTCCTCCCGCTTATTCCAAAGGAGTGTGTTCATATGGGACTTTGTGGAGAAGGTGGTGGTTTCCATGGAGACGGCGGATCAAATGGGTGACTTGCGGGGGTCAACCGAACTGTGTGACTCTCTGTGTCACTATGCCAACGCCATCAACGCCTCGCCGCGGAACATCGGCAAGGAGGGCAAGTTCCAGCTGCTGGTCTGCTTGGGAGTCAGGGACCAGCTGCTACCCCAGTGGCTCCCCTTGTTGGCCGAGTCCCACCTGACAGCACGTCTCTACGAGGAGTCGGCTTTGGTccaggaccacgcagccgtcaactCCCTCTCTCGCATCCTTCATACCCTCCACGAGTTCCCCATCACCCTGGAGACGGCCCTCATTAAGGGGGTTGACCTCTAACCCCACCGCCGCTGAGGACACTGGGATATGGAGTTTTACCCCTATTCACATAATGCACAACGTACACAGGGTAGCAGGACCTCAACAGAGTCGAGCGACTgctagggctggcacaattaccgtaTAACCGCTTAACtgacggttatggatgaagactcATGAAAATAAAATCCCCTTCATAACCATTGAAATTATGatcatgtttttttgggggggaggtgGAATGAACAGCTGACCACTATATTGGATGCTGGGCATTTGTGCGGTTGCGTCGGTTTCTGCTGTAACACGGACTCTACAACGGATGAAACTTTGTTGCTCCTTGGTGAAACAGGCAGGATGTTGTAGCAAACTAGTATTCGGTTGCCTAggcaacgcccccccccccccctgcagcaGCAGTCAGTAGAGAGAAAATGTGCGTCTTTAAAGCGGCAATCTGCGGTTGAAACAATAAAGCCCCCTGCTTTTTGTAAAGCTGAGGGACGGGgcaggagaaatgtaaccactctcaaattcataaacagagctatggatgcaaagactgaccatccatgatgtcAGAGTTATAGTATTAACCATGTTTTAGGGTAAAGTGTTAGTTTTagatttactttgtttacaaacattgtagTAAAAACAAGCATATATTTTAGGTTCTGATGGCGTATAACATTTGTACTAAATGAGGCATttgtaagttatattcttcaagaatcaatgagtaCATATCACTCAGTCACAAGTCCCAAAAtgaatgtagcaactgcagattgccccttaaaaaatatatatatatatatatatatatatatatatatatacaatttgtTTTGCTATTCACATGGTTATATAACGATGACCGCGGTCATTTGGCTGACTAATTACCGTCATCCAAAATTacatgaccgtcacagccctaatGACTGCCTCTCACGgtgtcctctctccttcctttccgcACCCATCTGCGTAGATTTGGCAGTTGTAAGTAAGCAGTGTGGCACAAAGCTCGTCATTGGATCATCATCTCTTCAATCCCGTCCGATCCAGTgtagaggaaggaaaggagacaatgACAGGAAGTTACTTTAAGCTGAAGTCACACGAAGCAATCTGAATGCAATTTTTTAAATACTTGCAACAAAGTTGCATCTGGGTTGCTCTGTGTGTCAACCCACAAAAATGGCCAGCAACTTAGTTGCATTGCATCGCAAGTGCTAGAGATTGATCCTATTTCACCAACTGACTGTATGCAATGTCCAATCAGTGAGCTACAAGACTTGTCATATCGTTCTGTTCGGGACTCAGATGTCACTTGCaaccagggttgggtaggtttcTTTCGaaatgtaatccgttagttactagttacctgtccaaaatgtAAGGGTAAAATAACCTTAGAATTACCAAAATTTCATAATGTAATCCGATTACTTTCTCGCTGATTAAAGTTACATGTATTTTATTCTTTTATCCGATTACATGTGACTGATTACATGTAACAAATTATTCCCCATGCAACCCTGTTTGCAACTTACGTCTACAACAGAAATTGCGTCCAAATTGCTTTGTGCGACACAGGCTTTAGACTATTGAGACACAACCACCAGGGCTGGTCAGAACTAGACAGCTGAACTCTCATGAAAAGAGGAAGTTATTTGTGGGTGGTGTCTGGGAGGGGAAGGAACCCAGAAACAAGCCACTGCCAAACGGCAGCTTCTGCAGGCCTCTAATGCCACAGCACAGCAGGCTTATTGCCTTGTCCACTAAATCAGTCAAtgtcatacatactgtacatacacacagaagaaaacatgttttttctttcttctcctcttatGCTTATCTACACTGTGATCTGTCTGTAGGAGGAGTGAGGCGGAGTGATTCCCTTTTACCCAATCAGCTTTGATGTCTCACATCGTGAAGAACAAGGGAGGAGAAAAGAGTTGCGGTGGTAGTGATGGTCATGAACTTTGACCTGCCCACCAGGCCTACTTTGAATCCTATTGCTGTTATGCTTTCCTTGGGAATATAAACCTGACAAATGTATGCATGGCCATATCAGGGgcgtattcactaggaaccaaacgggCCGAAACGAGGAGGGACAAACTTGTCCAATGAGAAACACTAATATTTGCTAATGTTTTCAATGgtatgcactaatgaatacacccctgtttttctctctctgtggtgtatTCTCTCGACACAGTTTTTCTGCCCGCCAATCATGTGTATTTTTATGGTATGGGCATTGTGAATGGATTCATTTAGGATAGTTACTCTGCTCAAAAGCTGGTGTACATGTTTGTCCTCCAAACCTTGGTAACACTTTGTAATATCTTTCATGAAGAAAAACATCAAGTGCTTTATAAACTATAAATGTTATAAAATATTATGCTTATAAAGGCTTACAAATAACACTTAAGtttataaatggtttattaatggcctgccgagtggcgcagtgctagctgtgccactagagatcctggttcgagtccaggctctgtcccagccggccgtgaccgggagacccatggggcggcgcacaattggcccagcattggccgggttaggggagggtttggccggcagggatgttcttgtcccattgcaCTCTAGTGACTCCTATGGCGAGCTGggtgcaatgcacgctgacacagtcgctTTCCAGCTGGCTTCCGAGttaagcaggcattgtgtcaagaagcggtGCTGTTCAGCTCGgttatgtttcggaggacgcacgggtctccaccttcgcctctcccaagtctgtaccggagttgcagcgatgggataagactgtaactaccaattggataccacgacattgggggagaaaaagggggtaattGTTAAAATAAATATGTTTATGAATGCCCATTCATGAAAGTTGAtttaaagtgttaccaaaatCTCATGTCATTTTTTCTTGAAATTGTCTCTGTGCAACAGTTGCCTAGTCCTGTACATTGGAGGTTTTATTTGACCTACTGAAGCCATAAGAGGCACGACTCTTAATGTTCCCTGACTTATTGATCTGTGTTGTTCGATTCACTGTTTGCCTCCGGGGTCATTCTGGTTTTGCTGACAAATATAGATTAGTGAAATATTGAAATTGGTCTTGTGTTAAATGAACATTTTGTTCAcgcagcttcttttttttttttttactgtgaatGTTTGTTTATTTGAACGTCGCCTAGTAAGAAGTCGTCCTTCAGTCATCCAATGTCACAATATACAATGTTACTTACAGTAGACTTGTGAAAACAATCTGTCAACGAGTAGAAAAGTGTTTTCTGCATTTTCTGATCGTAATATCGTGATGCTTATTTAATTGTAATTGCTAGGTCGAAACACTGAGTACAGAAATAAGCTTCATATTATATTGATATTACATGTGCTTTCTTTGTTGACAAGGTCCCAAGATACTGTCTCGTGCGTTGTCCTGCAAGCACTGTCCTTAGTCAAAGCCACAATGACCAAGTCTCTACTAATATTACCTGAACATAGATATGAGGGTAAGCAATAATGTATTATTGTTCCTTTGAATATTTATGAAACGTGTCGTTAAAGATTAAAGTCTAAGATAAACTGTT

Function

symbol description
dennd5a Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 49. Orthologous to human DENND5A (DENN domain containing 5A).

NR:

description
DENN domain-containing protein 5A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036951202.1 True 7663 mRNA 0.51 21 57467108 57527083

Neighbor

gene id symbol gene type direction distance location
LOC110492368 LOC106561072 coding upstream 9022 57454370 ~ 57458086 (+)
LOC110492381 LOC106561071 coding upstream 13012 57449413 ~ 57454096 (+)
LOC110492347 LOC106561068 coding upstream 17844 57440643 ~ 57449264 (+)
LOC110492386 LOC106561075 coding upstream 35001 57430187 ~ 57432107 (+)
swap70b LOC106561063 coding upstream 68922 57371576 ~ 57398186 (+)
LOC110492340 LOC106561069 coding downstream 9864 57536947 ~ 57546176 (+)
LOC110492398 LOC106561074 coding downstream 23869 57550952 ~ 57556023 (+)
LOC110492308 LOC106561065 coding downstream 29722 57556805 ~ 57560839 (+)
LOC110492452 ccdc34 coding downstream 47165 57574248 ~ 57579830 (+)
LOC110492461 LOC106561056 coding downstream 53071 57580154 ~ 57583524 (+)
G162955 NA non-coding upstream 120619 57346238 ~ 57346489 (+)
G162944 NA non-coding upstream 148428 57318470 ~ 57318680 (+)
G162939 NA non-coding upstream 156277 57310584 ~ 57310831 (+)
G162922 NA non-coding upstream 189093 57277803 ~ 57278015 (+)
G162299 NA non-coding upstream 341664 57125145 ~ 57125444 (+)
G163047 NA non-coding downstream 3867 57530950 ~ 57531175 (+)
G163048 NA non-coding downstream 4866 57531949 ~ 57532168 (+)
G163049 NA non-coding downstream 6865 57533948 ~ 57534243 (+)
G163352 NA non-coding downstream 134869 57661952 ~ 57664441 (+)
G162130 NA other upstream 413466 57048314 ~ 57053642 (+)
G161687 NA other upstream 1214510 56245044 ~ 56252598 (+)
G160569 NA other upstream 1519863 55946143 ~ 55947245 (+)
G159889 LOC106562215 other upstream 2738248 54728296 ~ 54728860 (+)
G159415 NA other upstream 3113720 54352983 ~ 54353388 (+)
G163513 LOC106561046 other downstream 401067 57928150 ~ 57931991 (+)
G163660 LOC106561040 other downstream 688594 58215677 ~ 58216383 (+)
G166131 lmod2 other downstream 2418625 59945708 ~ 59953165 (+)
G166878 NA other downstream 2988549 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 3324349 60851417 ~ 60866455 (+)

Expression


Co-expression Network