LOC110492681 (LOC106561133)


Basic Information

Item Value
gene id LOC110492681
gene name LOC106561133
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 58316277 ~ 58322551 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567141.2
tagttaaataaagattaaataaaaaaatgtataaaaagaaGTTACTTAACACTTTGACTCCTTTTACACATGATGTCTACGCAGGTAGGTTAACACATTGTTACCTTCCATGATGATAATCCATGGTGTCATCTGTTTCAAGGCCCACATGCCATCCGGCAGCTCTAACCCAGGGCTTGAGTGTAACGGAGGTGTTGCTATATTAGATGAACCTCCATCCTCCAGCAGAGGAAGATCTGCATACAGTCTACCCACACCAGTCACTTCCTCCCTGCCTTTAACTGGGTCAAGCTGTTCTCTAGCTGCTTATGGTTGGGTCTACTTCCTTCCTGGCCTTCTTCCGCTTCTTATTCTTCCTGGTTTCAGTGTTGCTAGAGTCCTCTCGGGAGACTGTAGGGGTCATCATGTCATATTGACCAGGCTCATTCACGACATCATCCAGACCTGTCATTTAAAAGAGAGCTCCGTGTTCAGAGTTTTTTTTAGGGAGACAAAGAGCATAGCTGTGAAGCACTGTTGCTTCCATTTAGTGCTATTTGTCACACAAAGGTGATACCACAAACTATATTTTATGCATCTTTGTGGGTAGATTGCCCTTTTAGTGTCTATACAACACCACCAGGCTAACTCAAAACATGAATGATCTGCCATATCAAACACTTTGTTATTCGGTTATACAATTCAcgggaaataaataattattatgATGCTGACTCTTTCTGACTCTTGATTGCCTGATACATCCTTATAAAAAGACAAGTGGCAGCTTATTGCCATTTGACAGAAGAACAGGGTGAGTACACGTCACTCTGATAGAGCCTACACATGACCACAATGCAGTTCAATGTACTGAtaaaacaaatgaaacagaaaacTATTTCCTTTCTCAGGTAAGGTGAGCGGTTAAGAGACTCAAAAAATAACACCAGCATACAACTTTATCAGAAGAAAATAGGTTTAGTTTTTCTATAATTTACCTTTGGAAGTCATTGGGCTTTGGAGTGAGGATGATCGCTTACTTGGCTCTGTGTAAATACTTCTCTCTGGCCATAGTTGTGGTCATAGTTTCCTGTGTGAATGGAAAGGACCCTCTATTTGATTGCCTACAAGACTCAGACTATAATGAGCTACTTAGAATAGTGGACAAGGGTCTCCCCCACACCGGCACACCTCATCATATTGCCATCATCGGGGCTGGCATGGCTGGCCTGACGGCAGCAAAGTTTTTGGAGGAGGCAGGACACAAGGTAACCATAATAGAGGCAAGTAATCGTATTGGAGGACGGGTAGAGACGTACCGACCTAAGGGAGAGCATTGGTACGCAGAACTTGGTGCCATGAGGATCCCTAACTTCCATACAATTCTGTTGAAGATTGCAAGCCATGCAGGCCTTAGTCTGAACCCATTCATTGAGGATAACATTAATGCTTACTATTTGGTGAATGGGTTGCTGCACAAAAACTCTCTGGTGAAAGGGGACCCAGACGTCCTCAACTATCCGTTGAATGAAGATGAGAGAGGGAAGTCAGCTGATCAGCTCTTCGACTTGTCTTTGCAGAAGATAAGAGATTATGTGAAGAACAATGGCTGCCGTGCCATGCTGGACAAATATGACATGTTCTCTGTAAAGGAGTACCTTGTGAAGGAGGCCAATCTGAGTCGTGGTGCTTTGCGGATGATTGGGGATATTCTGAATGAGAACAGTTTATTCTACACTGCGCTCACAGAGGCGCTGTATGATCAGTCTGATATCAATGATGAGACTATctACTTTGAGGTGACAGGCGGGTTTGACAAACTACCCAATGCCATTTGCGAGGACTTGAAGGGCACCATCCACCTAAATTCCAAGGTGAAACGTATCAGTCAGACTAGCAATAAAGTGACTGTGTCCTACCAGGACCACCATCTCTGGCACAAACCATCCTCCCTCACCCACCTGACAGTAGACTACGCCTTGTTGACAGCCACCGCCAAGGCTACTCTCTTTATCGACTTCGAGCCCCCGCTATCAGCAGACAAGATGGAGGCGCTGCGTTCGCTGCACTATGATAGCTCCACCAAGGTGGTCCTGATATTCAGTGAGAGGTTCTGGGAGAAGGAGGGCATCAATGGAGGGAGGAGCATCACGGATATGCCCTCTCGTTTCATCTACTACCCCAGCCACAGATTCCCTAACACGGACATCGGGGCCCTCTTGGCTTCCTATACCTTCTCGGATGACTCCACCCTCTTTCAAGGGGTGAATGACGAGGAGCTGCAGGGTCTAGTGCTGGAGGACCTTGTCAAGATCCACGGGGAGGGCATACGGCCACTCTGCATTGGAGGGCTGGTGAAGAAGTGGGCGCTGGATCCCTATAGTCTTGGGGCATTTGCCCTCTTCACCCCGTACCAACATATAGACTATGCCTCAGAACTGTTCAGGAACGACAATAGGATCCACTTTGCTGGGGAGCACACAGCCCTGCCTCATGCCTGGATAGAGACGGCCATGAAATCTGCTCTTAGGGCAGCTAGAAATATCAATAACCTCAGAGAGTAGAGAACGGGTGCAGTACAGTATATACTCTAATCCACTGGTGAAAGCGTATGTCTGTATACTCTGGAGAAGAGAGaacacgtacagttgaagtcggaagtttacatacaccttagccaaaaccatttaaactcaattttcacaattcctgacatttaaccgaag

Function

NR:

description
L-amino-acid oxidase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567141.2 True 2705 mRNA 0.46 8 58316277 58322551

Neighbor

gene id symbol gene type direction distance location
LOC110492647 LOC106561039 coding upstream 19531 58253604 ~ 58296746 (+)
LOC110492604 LOC106561042 coding upstream 205097 58110123 ~ 58111180 (+)
LOC110492579 LOC106561044 coding upstream 206834 58040338 ~ 58109443 (+)
LOC110492531 LOC106561047 coding upstream 518643 57795263 ~ 57797634 (+)
LOC110492500 LOC106561050 coding upstream 526882 57667227 ~ 57789395 (+)
LOC110492721 LOC106561036 coding downstream 474832 58797383 ~ 59033367 (+)
LOC118937284 LOC106609580 coding downstream 1065399 59387950 ~ 59390103 (+)
LOC110492752 LOC106561032 coding downstream 1079626 59402177 ~ 59643249 (+)
LOC118941102 NA coding downstream 1149620 59472171 ~ 59477345 (+)
LOC110492759 gpr37 coding downstream 1451612 59774163 ~ 59781857 (+)
G163662 LOC106561040 non-coding upstream 92792 58216991 ~ 58223485 (+)
G163591 NA non-coding upstream 139978 58116793 ~ 58176299 (+)
G163544 NA non-coding upstream 316782 57995304 ~ 57999495 (+)
G163499 NA non-coding upstream 342498 57903837 ~ 57973779 (+)
G163464 NA non-coding upstream 470840 57845123 ~ 57845437 (+)
G164289 NA non-coding downstream 173641 58496192 ~ 58497512 (+)
G164304 NA non-coding downstream 181497 58504048 ~ 58504313 (+)
G164307 NA non-coding downstream 183329 58505880 ~ 58506095 (+)
G164312 NA non-coding downstream 186758 58509309 ~ 58509560 (+)
G164317 NA non-coding downstream 191624 58514175 ~ 58514592 (+)
G163660 LOC106561040 other upstream 99894 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 384286 57928150 ~ 57931991 (+)
G162130 NA other upstream 1262635 57048314 ~ 57053642 (+)
G161687 NA other upstream 2063679 56245044 ~ 56252598 (+)
G160569 NA other upstream 2369032 55946143 ~ 55947245 (+)
G166131 lmod2 other downstream 1623157 59945708 ~ 59953165 (+)
G166878 NA other downstream 2193081 60515632 ~ 60515880 (+)
LOC110493059 LOC100194658 other downstream 2528881 60851417 ~ 60866455 (+)
G167288 NA other downstream 2740042 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 2909645 61232196 ~ 61232545 (+)

Expression


Co-expression Network