Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110492948 |
| gene name | LOC106561016 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048566.1 |
| NCBI id | CM023220.2 |
| chromosome length | 103806877 |
| location | 60654601 ~ 60666601 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| troponin I, fast skeletal muscle-like |
| id | name | namespace |
|---|---|---|
| GO:0005861 | troponin complex | cellular_component |
| id | description |
|---|---|
| K12043 | TNNI2; troponin I, fast skeletal muscle |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021567377.2 | True | 1249 | mRNA | 0.41 | 7 | 60654601 | 60666601 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| syt8 | LOC106561125 | coding | upstream | 15085 | 60627938 ~ 60639516 (+) |
| LOC110492846 | LOC106561021 | coding | upstream | 247781 | 60398876 ~ 60406820 (+) |
| LOC110501735 | NA | coding | upstream | 366977 | 60274384 ~ 60288852 (+) |
| LOC110492825 | fezf1 | coding | upstream | 387209 | 60262699 ~ 60267392 (+) |
| LOC110501720 | cadps2 | coding | upstream | 403504 | 59986065 ~ 60251097 (+) |
| LOC110492922 | LOC106561015 | coding | downstream | 16379 | 60682980 ~ 60695886 (+) |
| LOC110492964 | LOC106561014 | coding | downstream | 30778 | 60697379 ~ 60712198 (+) |
| LOC118941118 | NA | coding | downstream | 48052 | 60714653 ~ 60719958 (+) |
| LOC100170211 | LOC100170211 | coding | downstream | 58989 | 60725590 ~ 60734031 (+) |
| LOC110492990 | LOC106561017 | coding | downstream | 68524 | 60735125 ~ 60740362 (+) |
| G167025 | NA | non-coding | upstream | 36549 | 60617769 ~ 60618052 (+) |
| G166991 | NA | non-coding | upstream | 48739 | 60605591 ~ 60605862 (+) |
| G166907 | NA | non-coding | upstream | 105044 | 60549349 ~ 60549557 (+) |
| G166900 | NA | non-coding | upstream | 116123 | 60537821 ~ 60538478 (+) |
| G166899 | NA | non-coding | upstream | 117084 | 60537221 ~ 60537517 (+) |
| G167059 | NA | non-coding | downstream | 2911 | 60669512 ~ 60669713 (+) |
| G167137 | NA | non-coding | downstream | 133846 | 60800447 ~ 60829029 (+) |
| G167154 | NA | non-coding | downstream | 175060 | 60841661 ~ 60891125 (+) |
| G167164 | NA | non-coding | downstream | 189991 | 60856592 ~ 60907513 (+) |
| G167198 | NA | non-coding | downstream | 254515 | 60921116 ~ 60921322 (+) |
| G166878 | NA | other | upstream | 138721 | 60515632 ~ 60515880 (+) |
| G166131 | lmod2 | other | upstream | 701436 | 59945708 ~ 59953165 (+) |
| G163660 | LOC106561040 | other | upstream | 2438218 | 58215677 ~ 58216383 (+) |
| G163513 | LOC106561046 | other | upstream | 2722610 | 57928150 ~ 57931991 (+) |
| G162130 | NA | other | upstream | 3600959 | 57048314 ~ 57053642 (+) |
| LOC110493059 | LOC100194658 | other | downstream | 184831 | 60851417 ~ 60866455 (+) |
| G167288 | NA | other | downstream | 395992 | 61062593 ~ 61074591 (+) |
| G167325 | LOC106561003 | other | downstream | 565595 | 61232196 ~ 61232545 (+) |
| LOC110510683 | LOC106560954 | other | downstream | 864988 | 61525283 ~ 61535728 (+) |
| G167609 | LOC106560954 | other | downstream | 1060358 | 61726959 ~ 61727454 (+) |
