LOC118941118


Basic Information

Item Value
gene id LOC118941118
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 60714653 ~ 60719958 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005037406.1
gTTACAGAGCAAGACGTGCAAATATTATTGATACTGTAGTTATCTGGTTGGTCGGTGTGGAGCCTATTTTAAGATGGGGACCAGACTGACCCTCATGACACGTGTCACCTCTCATGATGTAGAATAATGCAAGAGCCAACCTTCGCTTGCGGATGGCGGGATATGATGATATTACAGGGCATGACAGGGCAGTATATCAGGTTGACAGGGGCCGGCAGCATAATTTTCTATTACCATAAAGACCGTAGGAAAAAATACCATGTAGAGGGAGGGATAAACAACTGGCATCCACTATTAGCATTTAATACTGTGTACTGCCTCGTTCATCTGCCAGTGGCTTGCCATCCTCTCACAGCTGCTCTTCATTTCTCATCATTGTTTCTCTCATAGgtattttcataaaactgctttgttggttaagggcttGAAAAAGATGACATCGAGTCGCAGTGGTCATCTGATGAGCTTGATGCTTTTGATTGCCCATGACCTGCTGGAGGTAGAAGCAGTAAAGGAAAAGGCAGCGTATGTAGAAGATAACTGCTCTGCTCCCGGATATGCCTCGGGGTCTTCCTGAGCTGCAGGTATCATACCACTCTGACCAATTTATTCTCATTTGATCTGCTTTGAATACCTGACTTGTGAAATCACCCATACAGTCATACAAAATCCTAACTTAATTATCTTCTGTGCTACATGTTGATTTTGCAGTATGTGTTAAAGCTTATTTTGGATGGATTTGATTTGCATGGAAACTAAATGAATTGAATGAAATTAATCGATCTTAAACTTCCTCCTTGAAATCTGTGCAAAAAGCTGAATCCGACCATTGAGAGACACACTGTGTAGACACTGGTGCCACATTGCTTAAAAAGTTTGCCCAGACCATCAACGAGTTTGAGGaccatatatacactgctcaaaaaaataaagggaacacttaaacaacacaatgtaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005037406.1 True 959 mRNA 0.42 4 60714653 60719958

Neighbor

gene id symbol gene type direction distance location
LOC110492964 LOC106561014 coding upstream 2455 60697379 ~ 60712198 (+)
LOC110492922 LOC106561015 coding upstream 18767 60682980 ~ 60695886 (+)
LOC110492948 LOC106561016 coding upstream 48052 60654601 ~ 60666601 (+)
syt8 LOC106561125 coding upstream 75137 60627938 ~ 60639516 (+)
LOC110492846 LOC106561021 coding upstream 307833 60398876 ~ 60406820 (+)
LOC100170211 LOC100170211 coding downstream 5632 60725590 ~ 60734031 (+)
LOC110492990 LOC106561017 coding downstream 15167 60735125 ~ 60740362 (+)
LOC110493043 LOC106561013 coding downstream 61757 60781715 ~ 60846975 (+)
LOC110493059 LOC100194658 coding downstream 131459 60851417 ~ 60866455 (+)
LOC118937285 NA coding downstream 153267 60873225 ~ 60875437 (+)
G167059 NA non-coding upstream 44940 60669512 ~ 60669713 (+)
G167025 NA non-coding upstream 96601 60617769 ~ 60618052 (+)
G166991 NA non-coding upstream 108791 60605591 ~ 60605862 (+)
G166907 NA non-coding upstream 165096 60549349 ~ 60549557 (+)
G166900 NA non-coding upstream 176175 60537821 ~ 60538478 (+)
G167137 NA non-coding downstream 80489 60800447 ~ 60829029 (+)
G167154 NA non-coding downstream 121703 60841661 ~ 60891125 (+)
G167164 NA non-coding downstream 136634 60856592 ~ 60907513 (+)
G167198 NA non-coding downstream 201158 60921116 ~ 60921322 (+)
G167204 NA non-coding downstream 216295 60936253 ~ 60936489 (+)
G166878 NA other upstream 198773 60515632 ~ 60515880 (+)
G166131 lmod2 other upstream 761488 59945708 ~ 59953165 (+)
G163660 LOC106561040 other upstream 2498270 58215677 ~ 58216383 (+)
G163513 LOC106561046 other upstream 2782662 57928150 ~ 57931991 (+)
G162130 NA other upstream 3661011 57048314 ~ 57053642 (+)
G167288 NA other downstream 342635 61062593 ~ 61074591 (+)
G167325 LOC106561003 other downstream 512238 61232196 ~ 61232545 (+)
LOC110510683 LOC106560954 other downstream 811631 61525283 ~ 61535728 (+)
G167609 LOC106560954 other downstream 1007001 61726959 ~ 61727454 (+)

Expression


Co-expression Network