XLOC_002066



Basic Information


Item Value
gene id XLOC_002066
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007121.7
NCBI id CM002894.2
chromosome length 45420867
location 20501776 ~ 20502178 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00005704
CTTTGTATGAGCCTGGAGAGTGAATTGACCTTTGCATTAGTGGATGAAGCAACGCAGTTGCAGAGGTCAGTTTTCTCATGCGGTTAACACACGTGACGGACCATCTAACAAGACCATACAGCTCCAAATTTCCTTCAGCATAACCCAAATAAAGCTTCCATCCCTGATGACGTGAGTATTTACATTTCACAGGCATTTCCATGAGCTGATGGCCATGTGACTACAGAAGGAACGCAGGACTGTAGGATTATGGAATTTGTGCACTGATGTGTGTAAGTTACACAAACTGGGTTTTTATattttgatggcataattgtgaaAAAAACACACTACCCTTTTATTCTGGAGTTTGACCAAGTTTGGACTGTACTAAAAATGGTGACTTGCATATAGCTTAAAATAA

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00005704 True 403 lncRNA 0.40 1 20501776 20502178

Neighbor


gene id symbol gene type direction distance location
XLOC_002065 NA coding upstream 49146 20448467 ~ 20452630 (+)
XLOC_002064 r3hcc1 coding upstream 99615 20392083 ~ 20402161 (+)
XLOC_002063 NA coding upstream 120463 20377088 ~ 20381313 (+)
XLOC_002062 golga7 coding upstream 129507 20364009 ~ 20372269 (+)
XLOC_002061 TCIM coding upstream 244601 20256454 ~ 20257175 (+)
XLOC_002067 letm2 coding downstream 87791 20589969 ~ 20626795 (+)
XLOC_002068 prnpb coding downstream 126520 20628698 ~ 20632779 (+)
XLOC_002069 NA coding downstream 141157 20643335 ~ 20645459 (+)
XLOC_002070 NA coding downstream 162838 20665016 ~ 20667861 (+)
XLOC_002071 BX548043.1 coding downstream 181858 20684036 ~ 20684150 (+)
XLOC_002058 CABZ01059623.1 non-coding upstream 776182 19602334 ~ 19725594 (+)
XLOC_002056 CABZ01059627.3 non-coding upstream 912043 19583289 ~ 19589733 (+)
XLOC_002045 AL928714.1 non-coding upstream 1699341 18798927 ~ 18802435 (+)
XLOC_002072 NA non-coding downstream 229436 20731614 ~ 20738676 (+)
XLOC_002073 NA non-coding downstream 601743 21103921 ~ 21106710 (+)

Expression



Co-expression Network