XLOC_020662 (ora3)


Basic Information

Item Value
gene id XLOC_020662
gene name ora3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 381143 ~ 382955 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00040862
ATGGCGCCTCAAAAGAAACCCGTGAACATCAGTCAGCGTATCACTTCATCTCCATTCTACATCATGCTGTACGTGGTTCTGGTGCTGCTGGGGAACGCGGGGAACACTACGGTGATCGCGGTGGTCGGACAGAGCCTTCTGCAGGAGACGGGAACCGTGCGGAGCTCGGATGTCATTCTGGTCAACATGGCTTTCTCAAACCTGATGGTGTCGTTGTTGAGGAACACAGTCCTGATGGTGTCCGACCTGGGAGTGGAGATTTTCCTCAGTAGAGATATGTGTCAGTTCATGATGGGCCTGTGGGTTTGGGTCCGCTCTGCTAATGTCTGGTCGACGTTCTTTCTGAGCGCGTTTCACTTCCAAACCTTGCGTCGGGTCGCTCCTCCTGTCATCAACCTGCACGGCCCTCGCGGACCCCCACTATCCCTCATCCTGGGCTTCTGCCTCATCTGGAGCCTCAACCTGATCTACTCCATCCCTGCCTTCATCTTCTCCAAGAACGGAAACGAGAACTCCACAGAGACGCTGATGTTGGTGAGCAGCACCACTCGGCCACTGCTGGGCTGCATCTGGGACTTTCCTTCAGCCTACAGTGGCCTGGCCTTCGCCACCTCCTCCATGATCCTCCACGAGTCCATCCCCATCTGCCTGATGAACATCACCAATCTGGGCTCGCTCTGCACGCTGTATGCACACGGACACAAGCGCACTGTTGCCAGTCAGGGTGAGGACGCTCCGGTGGTCTCCCGCATCCCTGCAGAGCGGCGGGCCGCTAAAGTGATTCTGGCTCTCAACATCCTCTTCATTTCATCCTGGGGCACTAATGTCATCTCGGTCAACTATTTCAATTACAACCGCGGACAGTCCACAGAGTTCCTGCTCATCATTGCTCGATTCGTGAACATGAGCTTCATTGCGTTTTCCCCCATCATCCTTGCTGTGGGACACCGGAAGCTCAGGGCCTTCATAAAGTCAGTCCTGTCGCATATGATCTGA

Function

symbol description
ora3 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of taste. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in liver; olfactory epithelium; and olfactory receptor cell.

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0050896 response to stimulus biological_process
GO:0050909 sensory perception of taste biological_process
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-100721-3 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway and sensory perception of taste. Predicted to be located in membrane. Predicted to be integral component of membrane. Is expressed in liver; olfactory epithelium; and olfactory receptor cell.

Ensembl:

ensembl_id ENSDARG00000059315

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00040862 True 996 mRNA 0.55 4 381143 382955

Neighbor

gene id symbol gene type direction distance location
XLOC_020661 FNDC10 coding downstream 8420 370915 ~ 372723 (-)
XLOC_020660 ssu72 coding downstream 13574 359273 ~ 367569 (-)
XLOC_020659 tmem240b coding downstream 26551 349121 ~ 354592 (-)
XLOC_020658 necap2 coding downstream 33719 341990 ~ 347424 (-)
XLOC_020657 NA coding downstream 65763 313710 ~ 315380 (-)
XLOC_020663 CABZ01072989.1 coding upstream 4118 387073 ~ 392224 (-)
XLOC_020664 NA coding upstream 9664 392619 ~ 395900 (-)
XLOC_020665 dstyk coding upstream 89372 472327 ~ 506522 (-)
XLOC_020666 ccnd3 coding upstream 154762 537717 ~ 547760 (-)
XLOC_020667 bysl coding upstream 167873 550828 ~ 557965 (-)
XLOC_020646 NA non-coding downstream 279696 101082 ~ 101447 (-)
XLOC_020641 NA non-coding downstream 345027 27146 ~ 36116 (-)
XLOC_020672 NA non-coding upstream 276962 659917 ~ 697504 (-)
XLOC_020673 NA non-coding upstream 317258 700213 ~ 704907 (-)
XLOC_020675 NA non-coding upstream 350289 733244 ~ 735244 (-)
XLOC_020676 NA non-coding upstream 356345 739300 ~ 760886 (-)

Expression


Co-expression Network