LOC110493394 (akr1d1)


Basic Information

Item Value
gene id LOC110493394
gene name akr1d1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 62268804 ~ 62272122 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567656.2
TACACAGAGAGTAGAGCACGGTGCGCTGGGCGGGTAATTTTGCACTCTGGTAGCTCAAAGGTAGCTCAGTAATACATTAGCCATTAAGTTTCCTACATAAAGAAGCCCTAGCCTCACTTCTCCCATAGTCCAAACAAACTCAGAGATGAACTTGACTGCTGAGAAACACAGTGTTCCCCTCAGTGATGGGAACCGGATTCCCCTATTTGGACTGGGGACTTATGGAGACCCACGAACGACACCCAGAGGCACAGCGTTAAACAGTGTGAAGCATGCAATAGATGTGGGGTACAGACACTTTGATGGGGCTTTGGTGTATTTCAATGAGCACGAAGTAGGTCAAGCCATAAGAGAGAAAATTGCAGATGGAACCGTCAAAAGAGAAGACATCTTTTACTGTGGAAAGCTATGGAACACCTTCCACCCTCCAGAGCTCGTCAGGCCTGCCTTAGAGAGGACACTGAAGGCCCTGAAACTGGACTATGTGGATCTATACATCATCGAGATGCCCACCGCATTCAAGCCTGGTGATGAGTTTTATCCTAAATATGAGGACGGGCGGTACATTTACCATGAGACAGACCTTTGTGCAACATGGGAGGCTTTAGAGGCCTGCAAAGATGCAGGGCTGGTCAAATCTCTgggagtctccaacttcaacagGAGACAGCTGGAGCTCCTACTGCGAAAGCCTGGCCTCAAACACAGACCTGTGTCCAACCAGGTCGAGTGCCATCCATACTTCACTCAGCCCAAGCTGCTTAAGTACTGCCGCCAGAATAACATTGTGATCGTAGGCTACAGCCCCTTAGGCACCTCACGGGACGCCTCCTGGGTGAACCTGAAATGCCCTCCTCTGTTGGAGGATGAGGTCCTGGTGTCCATAGCGAAGAAGTACAGAAAGAACAGTGCTCAGGTGGCCCTGCGATTCAATGTCCAGAGAGGAGTGGTGGTCATCCCCAAGAGCTTCAGCACTCACAGGATCAAGGACAACTTTCAGATATTTGACTTTTCACTCACTGAGGATGAAATGAAAGCAATTGAAGGCCTGAACAAAGACATCCGTTTTGTGGAGCTTTTAATGTGGAGTGACCATCCTGAATACCCATTTCTGGATGAATATTAAGCCTGGCAATATCACTCTATGTATTCCTGTAACCTTGACAAATTCactgaacatgtttcatttttttttgtgtggaacCATTCTGTAGTAGCCTACGTTTCTTTGAGTTGATTCTGTCATTTTGTGAGGCAGTACCCCTCATCAAATGACCACTAGGGGGCTCTACTTGACAATGAATGAAAACCAATGACCAGTTGACGCGAAAAACTGTTTGAGAAATCAATCCCTATTGCACCTTAGTTGCatttaacacatttttttaaaagtataATAACCGCAGACTGCTGAAGTATCCCAAATATGCTGAAGTATTGCGATATGTAACACTAGTCTCATAACACTGTTAATACATCACTGCCCCTAGTGTTTGTTTATCGACCAATAAATGCACTTCAAGCTGA

Function

symbol description
akr1d1 Predicted to enable 3-oxo-5-beta-steroid 4-dehydrogenase activity; alditol:NADP+ 1-oxidoreductase activity; and ketosteroid monooxygenase activity. Involved in cellular hormone metabolic process; cholesterol catabolic process; and digestion. Acts upstream of or within bile acid biosynthetic process. Located in cytosol. Implicated in congenital bile acid synthesis defect 2.

NR:

description
3-oxo-5-beta-steroid 4-dehydrogenase

GO: NA

KEGG:

id description
K00251 AKR1D1; 3-oxo-5-beta-steroid 4-dehydrogenase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567656.2 True 1527 mRNA 0.46 8 62268804 62272122

Neighbor

gene id symbol gene type direction distance location
slc6a13 LOC106560993 coding downstream 10537 62223933 ~ 62258267 (-)
mon2 LOC106560994 coding downstream 51172 62167418 ~ 62217632 (-)
LOC110493282 LOC106560998 coding downstream 804502 61436215 ~ 61464302 (-)
LOC118936773 NA coding downstream 840337 61417500 ~ 61428467 (-)
LOC110493274 NA coding downstream 886598 61380548 ~ 61382206 (-)
wnt7bb LOC106560992 coding upstream 199122 62471244 ~ 62508410 (-)
LOC110493460 LOC106560989 coding upstream 476882 62749004 ~ 62878134 (-)
LOC110501769 LOC106560953 coding upstream 682997 62955119 ~ 62998770 (-)
LOC118941153 mansc4 coding upstream 750846 63022968 ~ 63025781 (-)
LOC110493479 LOC106560987 coding upstream 764267 63036389 ~ 63040509 (-)
G168766 NA non-coding downstream 13243 62223185 ~ 62255561 (-)
G168758 NA non-coding downstream 21653 62209056 ~ 62247151 (-)
G168289 NA non-coding downstream 324408 61944059 ~ 61944396 (-)
G168287 NA non-coding downstream 324828 61943657 ~ 61943976 (-)
G168286 NA non-coding downstream 326136 61942450 ~ 61942668 (-)
G169349 NA non-coding upstream 330651 62602773 ~ 62602987 (-)
G169350 NA non-coding upstream 331301 62603423 ~ 62603975 (-)
G169351 NA non-coding upstream 332544 62604666 ~ 62605407 (-)
G169346 NA non-coding upstream 339242 62611364 ~ 62612531 (-)
G169345 NA non-coding upstream 340991 62613113 ~ 62614612 (-)
G168141 NA other downstream 753148 61515237 ~ 61515656 (-)
G168078 NA other downstream 777133 61490434 ~ 61491671 (-)
LOC110493186 mlkl other downstream 968712 61290149 ~ 61303507 (-)
G168021 NA other downstream 1012789 61254512 ~ 61256015 (-)
G167866 NA other downstream 1293783 60974762 ~ 60975021 (-)
LOC110493507 LOC106560984 other upstream 874652 63146769 ~ 63224837 (-)
LOC110501772 LOC106560973 other upstream 1687401 63958607 ~ 63963969 (-)
tmem117 LOC106573612 other upstream 1893841 64102056 ~ 64170220 (-)
G172141 NA other upstream 2813450 65085572 ~ 65086188 (-)
G173121 NA other upstream 3111315 65383437 ~ 65383873 (-)

Expression


Co-expression Network