parvg (parvg)


Basic Information

Item Value
gene id parvg
gene name parvg
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048566.1
NCBI id CM023220.2
chromosome length 103806877
location 63262778 ~ 63275177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021567905.2
GGTGAAGTGACCTCACGTTTACCGGTCTTGCACTCTACCCTAATGCTCTAAACTATAAGTCTTGGCCACTAAGCATCATATATGAGACCTTTCCTCAGAACGCACTCTGAACTCTGTGTAGCAAAACCACAGTTACAAAAGAGGAAGTGCCCACTACTTACTTATTTCCTTCCGCATCCTCTCATTTTTCTTTTTACCCGTTTAACTCCTTCATTCGTCCTTTTTGTTTCTCATAGAAATGTTTAATTGGTCCTGAATTGGGTGAAGATTGTTTGTGCTGTCATCCCGTGGCATGTTTCTGGAGAACTGCTTGTCAGATTGGGTGCACTTCTTTTTGTAGCACGGCTATTTGGATTGATTCAGTGTTGACGTCAGTCAGGAAGCTGTACACAGGAGTTCCCCTATTCAGTCTGCTTGCTGCTACTGCTCTGAAGGTAAGGTTTACTGGATAAAACATTTTTGGTGTGCCTCCGGGGGGAAAGTTTGTGTCAACTTCAGGCAGAGAATCTCTAGGAGAGGAGTGAACTACACACACAGATGGCACAGTGAAGCTACACTCTCGTCTCAGGGAGACACCTTTACATATTGTTGGTCACAGTGCATCCCAGTCAGGGGATATGGAGGATTTTCCTGATATGTACCAGGGGAAAGACCCTGAGGACATTGAATCTTTCCAGGgtgagaggaggaagaTCATTCAGCCGACATCTTTGAAAGATCCCAAACTTGAAAAGCTGAAATCGGTTTTGGTTAACTGGATCAACAGTACTTTAAAAGAGGAACACATCGTAGTGCAGAGTCTGGAAGAGGATATCTTTGATGGCCTAATCTTGCATCACCTCCTTGGGAGGTTAGCTGGAGTGCTTCTGTCTGTGGAGGAGATAGCGGTGACCAGCGCTGCTCAGACACGCAAGCTGGAGGTCATCCTGGAGGCCCTGAATGAGAAACTGGGGCTACAGGACAGCTCTCTCAGCAGGTGGAGTGTCAAACTCATCCACAGCAAAGACTTGCTGGCCACACTCCATCTTCTGGTTGCCATGGTGAGGTGCTTCCAGCCTAATCTGGAGCTTCCCCCAAATGTCAGAGTGGAAGTTGTCTTGTTGGAGGTCAACAGAAGTGGAATCAAATCAGAAAAGGAAATAGAGATTCTTACAGATGAAAGCGATTCAGCTACCGACGCCCTGAGCAGCTCAGACAGCGAGGATCccattgagcagctgctgaagcTGGAACCCCACAAGATCAACACAGTAAAGCGGGCCATCATGCACTTTGTCAACAAGAAGATGTCAACCTTGGGACTACAGGTGACAGACATGGAGAAACAGTTTTCAGATGGTGTTATTCTCCTTCTGCTGATTGGACAGTTGGAGGGCTTCTTTGTTCCACTCTATGACTTCAACATCACCCCAGTCAACGCTACTGAGATGCTTCAGAATGTGACCGTGGCCCTGGACCTCCTGAATGACATAGGGCTACCCACGACCAACATTGAGCCCCAAGATATAGTCTCTCAGGATGTGACAGCTACCTTGAAGGTCCTATATGCCCTGTTCAAGAAGCACAAAAGCAGATGAGAGTGGGAAGAACACGGACGAGGACATTAGGAGGTGAAGACGCCAGAAGTCCTTTGCCTGAGGTGTTTTTCCCCTGGCAAGTCCAGAATCATAGGCTGATTCCTTCTGTGAAATTACAGAAAAATCATATATCGATTCTATGTAAAGCTTTGTGTACTTTGTGTCAATAAAATTGTACTGTATGTGCCATAGTTTGAATAGCATGGGAAACCAATCCCCGACCACATTCCCCTTTGAAGATCCAAGTAATCTCAAAGTAGTCTGAAATTGTGAGTGAGTATCCTATTGTGTTCTATGACTCTGACGCTGCTGCTCGATGCAACAAGATATCATAGGAAAACGGCATCTTGTGACGTTTTTACAAAACGATAAGCATCAAAACGTATGATGTTTATGTCaatacattgcagtcaatgggaaaagatgagcGTCACAGGGTTGATGCCTAAGTGAATACATTGCATTTAATAGGGGAAGATTATTGACACAATGTGGACGCCTTTGAACATGACACCCTcgttctctctcaattcaattcaattggctttattggcatgggaaacatatgttaacattgccaaagcaagtgaagtagatactatacaaaagtgaaataaacaataaaaatgaacagtaaacattacactcacagaagttccaaaagaatgaagacattacaaatgtcatattatgtatatatacagtgttgtaacaatgtgcaaatgcttaaagtacaaaagggaaaataaataagcatatacctg
>XM_021567898.2
AAGTGACCTCACGTTTACCGGTCTTGCACTCTACCCTAATGCTCTAAACTATAAGTCTTGGCCACTAAGCATCATATATGAGACCTTTCCTCAGAACGCACTCTGAACTCTGTGTAGCAAAACCACAGTTACAAAAGAGGAAGTGCCCACTACTTACTTATTTCCTTCCGCATCCTCTCATTTTTCTTTTTACCCGTTTAACTCCTTCATTCGTCCTTTTTGTTTCTCATAGAAATGTTTAATTGGTCCTGAATTGGGTGAAGATTGTTTGTGCTGTCATCCCGTGGCATGTTTCTGGAGAACTGCTTGTCAGATTGGGTGCACTTCTTTTTGTAGCACGGCTATTTGGATTGATTCAGTGTTGACGTCAGTCAGGAAGCTGTACACAGGAGTTCCCCTATTCAGTCTGCTTGCTGCTACTGCTCTGAAGGGGATATGGAGGATTTTCCTGATATGTACCAGGGGAAAGACCCTGAGGACATTGAATCTTTCCAGGgtgagaggaggaagaTCATTCAGCCGACATCTTTGAAAGATCCCAAACTTGAAAAGCTGAAATCGGTTTTGGTTAACTGGATCAACAGTACTTTAAAAGAGGAACACATCGTAGTGCAGAGTCTGGAAGAGGATATCTTTGATGGCCTAATCTTGCATCACCTCCTTGGGAGGTTAGCTGGAGTGCTTCTGTCTGTGGAGGAGATAGCGGTGACCAGCGCTGCTCAGACACGCAAGCTGGAGGTCATCCTGGAGGCCCTGAATGAGAAACTGGGGCTACAGGACAGCTCTCTCAGCAGGTGGAGTGTCAAACTCATCCACAGCAAAGACTTGCTGGCCACACTCCATCTTCTGGTTGCCATGGTGAGGTGCTTCCAGCCTAATCTGGAGCTTCCCCCAAATGTCAGAGTGGAAGTTGTCTTGTTGGAGGTCAACAGAAGTGGAATCAAATCAGAAAAGGAAATAGAGATTCTTACAGATGAAAGCGATTCAGCTACCGACGCCCTGAGCAGCTCAGACAGCGAGGATCccattgagcagctgctgaagcTGGAACCCCACAAGATCAACACAGTAAAGCGGGCCATCATGCACTTTGTCAACAAGAAGATGTCAACCTTGGGACTACAGGTGACAGACATGGAGAAACAGTTTTCAGATGGTGTTATTCTCCTTCTGCTGATTGGACAGTTGGAGGGCTTCTTTGTTCCACTCTATGACTTCAACATCACCCCAGTCAACGCTACTGAGATGCTTCAGAATGTGACCGTGGCCCTGGACCTCCTGAATGACATAGGGCTACCCACGACCAACATTGAGCCCCAAGATATAGTCTCTCAGGATGTGACAGCTACCTTGAAGGTCCTATATGCCCTGTTCAAGAAGCACAAAAGCAGATGAGAGTGGGAAGAACACGGACGAGGACATTAGGAGGTGAAGACGCCAGAAGTCCTTTGCCTGAGGTGTTTTTCCCCTGGCAAGTCCAGAATCATAGGCTGATTCCTTCTGTGAAATTACAGAAAAATCATATATCGATTCTATGTAAAGCTTTGTGTACTTTGTGTCAATAAAATTGTACTGTATGTGCCATAGTTTGAATAGCATGGGAAACCAATCCCCGACCACATTCCCCTTTGAAGATCCAAGTAATCTCAAAGTAGTCTGAAATTGTGAGTGAGTATCCTATTGTGTTCTATGACTCTGACGCTGCTGCTCGATGCAACAAGATATCATAGGAAAACGGCATCTTGTGACGTTTTTACAAAACGATAAGCATCAAAACGTATGATGTTTATGTCaatacattgcagtcaatgggaaaagatgagcGTCACAGGGTTGATGCCTAAGTGAATACATTGCATTTAATAGGGGAAGATTATTGACACAATGTGGACGCCTTTGAACATGACACCCTcgttctctctcaattcaattcaattggctttattggcatgggaaacatatgttaacattgccaaagcaagtgaagtagatactatacaaaagtgaaataaacaataaaaatgaacagtaaacattacactcacagaagttccaaaagaatgaagacattacaaatgtcatattatgtatatatacagtgttgtaacaatgtgcaaatgcttaaagtacaaaagggaaaataaataagcatatacctg

Function

symbol description
parvg Predicted to enable actin binding activity. Predicted to be involved in several processes, including actin cytoskeleton reorganization; cell projection assembly; and substrate adhesion-dependent cell spreading. Predicted to act upstream of or within cell adhesion. Predicted to be located in cytoskeleton. Predicted to be active in actin cytoskeleton; cytoplasm; and focal adhesion. Orthologous to human PARVG (parvin gamma).

NR:

description
gamma-parvin

GO: NA

KEGG:

id description
K06275 PARV; parvin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021567905.2 False 2341 mRNA 0.44 13 63262778 63275177
XM_021567898.2 True 2159 mRNA 0.44 13 63262782 63275177

Neighbor

gene id symbol gene type direction distance location
parvb parvb coding upstream 467 63249489 ~ 63262311 (+)
hdac10 hdac10 coding upstream 13862 63239052 ~ 63248916 (+)
LOC110493518 pus7 coding upstream 24518 63226170 ~ 63238260 (+)
mrps35 LOC106560988 coding upstream 239916 63007323 ~ 63022862 (+)
LOC118941152 NA coding upstream 335306 62926746 ~ 62927472 (+)
plxnb2b LOC106560979 coding downstream 250605 63525782 ~ 63710132 (+)
tubgcp6 tubgcp6 coding downstream 437877 63713054 ~ 63741924 (+)
LOC118941167 NA coding downstream 486555 63761681 ~ 63763204 (+)
LOC110493594 NA coding downstream 491711 63766888 ~ 63787922 (+)
mov10l1 mov10l1 coding downstream 640748 63915925 ~ 63942569 (+)
G169712 NA non-coding upstream 106989 63152147 ~ 63155789 (+)
G169711 NA non-coding upstream 112719 63095099 ~ 63150059 (+)
G169675 NA non-coding upstream 211218 63051349 ~ 63051560 (+)
G169655 NA non-coding upstream 218683 63043889 ~ 63044095 (+)
G169654 NA non-coding upstream 219977 63042589 ~ 63042801 (+)
G169764 NA non-coding downstream 4649 63279826 ~ 63280420 (+)
G170035 NA non-coding downstream 315672 63590849 ~ 63592262 (+)
G169130 NA other upstream 477135 62785358 ~ 62785643 (+)
LOC118936783 LOC106560954 other upstream 1382354 61870393 ~ 61880657 (+)
G167609 LOC106560954 other upstream 1535324 61726959 ~ 61727454 (+)
LOC110510683 LOC106560954 other upstream 1730451 61525283 ~ 61535728 (+)
G167325 LOC106561003 other upstream 2030233 61232196 ~ 61232545 (+)
G170131 NA other downstream 545284 63820461 ~ 63830320 (+)
G170150 LOC106560975 other downstream 598071 63873248 ~ 63878233 (+)
map1lc3b map1lc3b other downstream 2255969 65531126 ~ 65536787 (+)
jph3 jph3 other downstream 2318340 65593468 ~ 65648660 (+)
G172639 NA other downstream 2660419 65935596 ~ 65936133 (+)

Expression


Co-expression Network